| Literature DB >> 31638997 |
Elisabeth Neuhaus1, Kilian Weiss2,3, Rene Bastkowski2, Jonas Koopmann2, David Maintz2, Daniel Giese2.
Abstract
BACKGROUND: Three-dimensional time-resolved phase-contrast cardiovascular magnetic resonance (4D flow CMR) enables the quantification and visualisation of blood flow, but its clinical applicability remains hampered by its long scan time. The aim of this study was to evaluate the use of compressed sensing (CS) with on-line reconstruction to accelerate the acquisition and reconstruction of 4D flow CMR of the thoracic aorta.Entities:
Keywords: 4D flow CMR; Aorta; Compressed sensing; Phase-contrast CMR; SENSE
Mesh:
Year: 2019 PMID: 31638997 PMCID: PMC6802342 DOI: 10.1186/s12968-019-0573-0
Source DB: PubMed Journal: J Cardiovasc Magn Reson ISSN: 1097-6647 Impact factor: 5.364
Patient characteristics
| Patient # | Age [y] | Sex | Disease |
|---|---|---|---|
| 1 | 49 | f | Bicuspid aortic valve (Sievers’ type 1/LR) with ascending aortic dilatation |
| 2 | 33 | f | Bicuspid aortic valve (Sievers’ type 1/LR) with aortic insufficiency and ascending aortic dilatation |
| 3 | 39 | f | Marfan syndrome, dilatation of the aortic annulus and sinus |
Acquisition parameters
| Healthy Subjects | Patients | ||
|---|---|---|---|
| Repetition time [ms] | 3.5 | 2.9 | |
| Echo time [ms] | 2.2 | 1.7 | |
| Field of View [mm3] | 280 x [220–290] x [45–60] | 280 x [280–300] × 90 | |
| Acquisition voxel size [mm3] | 2.5 × 2.5 × 2.5 | ||
| Recon voxel size [mm3] | 1.25 × 1.25 × 1.25 | ||
| Flip angle [degrees] | 4 | 10 | |
| Velocity encoding [cm/s] | 150 | ||
| Acquired temporal resolution [ms] | 49.3 ± 7.8 | 52.0 ± 1.9 | |
| Reconstructed temporal resolution [ms] | 39.4 ± 6.2 | 39.0 ± 1.4 | |
| Acceleration mode/ factors | SENSE: | CS: | |
| CS: | |||
Acquisition parameters differ slightly between volunteer and patient study for two reasons: 1) patient measurements were performed after the administering of contrast agent which necessitate the increase of flip angle, 2) patients with dilatation of the aorta require a larger field of view to cover the aorta. Both modifications effect repetition and echo time
Fig. 2Net flow curves. Exemplary net flow curves extracted from datasets acquired with different acceleration factors. Each subfigure represents a different contour within the aorta. The arrows depict stronger deviations between acceleration factors. Main differences between the flow curves can be observed during peak systole. The three-dimensional figure of the aorta in the center shows the five contours where haemodynamic parameters were evaluated
Acquisition time, net flow, peak flow and peak velocity averaged over all healthy subjects of group 1 for different SENSE and CS acceleration factors
| S2 | CS4 | CS6 | CS8 | CS10 | S6 | |
|---|---|---|---|---|---|---|
| Acquisition time excluding (including) gating efficiency [min] | ||||||
| 7:32 ± 1:29 | 3:20 ± 0:38 | 2:18 ± 0:26 | 1:41 ± 0:17 | 1:22 ± 0:16 | 2:00 ± 0:11 | |
| (15:09 ± 5:19) | (6:48 ± 2:12) | (5:02 ± 2:23) | (3:33 ± 1:11) | (2:52 ± 0:53) | (3:48 ± 0:44) | |
| Net flow [ml/cycle] | ||||||
| Root | 88 ± 14 | 91 ± 16 | 89 ± 13 | 87 ± 14 | 84 ± 17 | 86 ± 12 |
| AAo | 87 ± 15 | 86 ± 13 | 85 ± 16 | 84 ± 14 | 81 ± 13 | 78 ± 14 |
| Arch1 | 89 ± 16 | 81 ± 14 | 84 ± 16 | 82 ± 13 | 79 ± 15 | 76 ± 21 |
| Arch2 | 61 ± 11 | 61 ± 11 | 60 ± 14 | 60 ± 10 | 59 ± 11 | 70 ± 14 |
| DAo1 | 58 ± 11 | 59 ± 11 | 59 ± 13 | 59 ± 10 | 57 ± 10 | 58 ± 10 |
| DAo2 | 55 ± 11 | 53 ± 10 | 54 ± 12 | 54 ± 11 | 46 ± 11 | 45 ± 11 |
| Peak flow [ml/s] | ||||||
| Root | 407 ± 56 | 415 ± 60 | 411 ± 56 | 409 ± 58 | 401 ± 65 | 398 ± 48 |
| AAo | 398 ± 58 | 392 ± 53 | 389 ± 59 | 391 ± 63 | 376 ± 53 | 361 ± 40 |
| Arch1 | 376 ± 62 | 358 ± 56 | 365 ± 57 | 362 ± 55 | 438 ± 51 | 340 ± 48 |
| Arch2 | 264 ± 37 | 265 ± 36 | 259 ± 47 | 258 ± 40 | 261 ± 42 | 284 ± 34 |
| DAo1 | 257 ± 34 | 257 ± 33 | 260 ± 37 | 258 ± 36 | 254 ± 39 | 245 ± 28 |
| DAo2 | 226 ± 35 | 225 ± 32 | 226 ± 43 | 223 ± 35 | 201 ± 39 | 195 ± 36 |
| Peak velocity [cm/s] | ||||||
| Root | 130 ± 8 | 135 ± 9 | 137 ± 12 | 138 ± 15 | 134 ± 12 | 159 ± 19 |
AAo ascending aorta, CS compressed sensing, DAo descending aorta
Fig. 1Magnitude and phase-contrast images. Sagittal slices through the aorta of an exemplary dataset in peak systole. The different acceleration techniques and factors are shown in columns and labelled correspondingly. Magnitude (top row) and phase-contrast (bottom row) images with velocity encoding in foot-head direction (FH) are shown. Increased image artefacts can be observed for higher acceleration factors
Fig. 3Bland-Altman analysis. Bland-Altman plots comparing (a) net flows in six contours and (b) peak velocities in the aortic root of S2 and compressed sensing (CS) accelerated scans. Data from different contours are indicated by different markers. The mean differences, standard deviations and their confidence intervals (red shaded areas) were calculated from the data points of all contours. The red data points denote the data of the volunteer whose net flow curves are shown in Fig. 2. The mean differences in net flow (a) between S2 and CS increase with increasing CS acceleration factor, while the standard deviations of the mean differences remain almost constant. The peak velocities (b) tend towards negative biases for all CS acceleration factors, while only exceeding the confidence interval of the mean difference for CS8. The standard deviation of the mean difference increases with increasing acceleration factor
Summary of results of Bland-Altman analyses
| Comparison | Net Flow [ml/cycle] | Peak Flow [ml/s] | Peak Velocity [cm/s] | |||
|---|---|---|---|---|---|---|
| MD ± SD | CI of the MD | MD ± SD | CI of the MD | MD ± SD | CI of the MD | |
| Intertechnique | ||||||
| S2 vs. CS4 | 1.3 ± 8.0 | (− 0.4; 2.9) | 2.7 ± 20.4 | (− 1.5; 6.9) | − 4.8 ± 8.1 | (− 8.8; 0.7) |
| S2 vs. CS6 | 1.3 ± 7.1 | (− 0.2; 2.7) | 3.1 ± 22.3 | (− 1.5; 7.7) | − 6.3 ± 12.0 | (− 12.4; 0.3) |
| S2 vs. CS8 | 2.2 ± 7.8 | (0.6; 3.8) | 4.6 ± 25.2 | (− 0.6; 9.9) | −7.9 ± 13.0 | (− 14.4; − 1.3) |
| S2 vs. CS10 | 5.4 ± 8.0 | (3.7; 7.0) | 14.4 ± 28.3 | (8.6; 20.3) | − 4.0 ± 12.2 | (− 10.2; 2.2) |
| Inter-Observera | ||||||
| S2_1 vs. S2_2 | −1.3 ± 2.6 | (− 2.2; − 0.3) | −1.1 ± 6.7 | (− 3.5; 1.3) | ||
| CS6_1 vs. CS6_2 | −0.4 ± 2.8 | (− 1.4; 0.7) | 2.1 ± 9.5 | (−1.3; 5.5) | ||
| Intra-Observera | ||||||
| S2_1 vs. S2_2 | −0.4 ± 1.9 | (−1.1; 0.2) | −0.7 ± 8.1 | (− 3.6; 2.2) | ||
| CS6_1 vs. CS6_2 | −0.2 ± 2.3 | (− 1.1; 0.6) | − 2.1 ± 10.7 | (− 6.0; 1.7) | ||
| Scan-Rescanb | ||||||
| S2_1 vs. S2_2 | − 0.7 ± 4.9 | (− 2.4; 1.1) | 1.9 ± 26.3 | (− 7.5; 11.3) | 5.1 ± 4.9 | (0.9; 9.4) |
| CS6_1 vs. CS6_2 | − 0.2 ± 8.5 | (−3.2; 2.9) | 4.8 ± 32.1 | (− 6.7; 16.2) | 2.1 ± 11.6 | (− 8.0; 12.3) |
| CS8_1 vs. CS8_2 | − 1.5 ± 8.9 | (−4.7; 1.7) | 6.9 ± 42.5 | (− 8.3; 22.1) | 14.8 ± 38.2 | (− 18.7; 48.3) |
Data are given as mean difference (MD) ± standard deviation (SD) and 95% confidence interval (CI) of the mean differences. The main data sample considers 6 contours from each of in total 15 subjects. a Results for inter- and intraobserver analysis were only extracted from AAo and DAo1. b Scan-rescan measurements were performed in 5 volunteers
Fig. 4Advanced flow parameters. a Accumulated flow error ER as a function of CS acceleration factor. b Exemplary particle trace visualisation including the contours from which particles were ejected (ascending aorta, AAo) and arriving particles were counted (descending aorta, DAo1). c Percentage of particles ejected from the contour AAo reaching the contour DAo1 as a function of the acceleration factor
Fig. 5Pathline screenshots. Particle traces ejected from the aorta show aberrant flow patterns in patients #1 and #2 with bicuspid aortic valves (a and b) and patient #3 with Marfan syndrome (c). Patients #1 and #2 show pronounced right-handed helical flow patterns in the AAo; a smaller, slower helix is superimposed by a larger, faster and less-twisted helix. In patient #3 a helical flow along the DAo can be observed. For the corresponding movies please refer to the Additional files 4, 5 and 6