Jörg Rösgen1, Ruby Jackson-Atogi. 1. Pennsylvania State University College of Medicine, Hershey, Pennsylvania 17033, USA. Jorg.Rosgen@psu.edu
Abstract
Trimethylamine-N-oxide (TMAO) and urea represent the extremes among the naturally occurring organic osmolytes in terms of their ability to stabilize/destabilize proteins. Their mixtures are found in nature and have generated interest in terms of both their physiological role and their potential use as additives in various applications (crystallography, drug formulation, etc.). Here we report experimental density and activity coefficient data for aqueous mixtures of TMAO with urea. From these data we derive the thermodynamics and solvation properties of the osmolytes, using Kirkwood-Buff theory. Strong hydrogen-bonding at the TMAO oxygen, combined with volume exclusion, accounts for the thermodynamics and solvation of TMAO in aqueous urea. As a result, TMAO behaves in a manner that is surprisingly similar to that of hard-spheres. There are two mandatory solvation sites. In plain water, these sites are occupied with water molecules, which are seamlessly replaced by urea, in proportion to its volume fraction. We discuss how this result gives an explanation both for the exceptionally strong exclusion of TMAO from peptide groups and for the experimentally observed synergy between urea and TMAO.
Trimethylamine-N-oxide (TMAO) and urea represent the extremes among the naturally occurring organic osmolytes in terms of their ability to stabilize/destabilize proteins. Their mixtures are found in nature and have generated interest in terms of both their physiological role and their potential use as additives in various applications (crystallography, drug formulation, etc.). Here we report experimental density and activity coefficient data for aqueous mixtures of TMAO with urea. From these data we derive the thermodynamics and solvation properties of the osmolytes, using Kirkwood-Buff theory. Strong hydrogen-bonding at the TMAO oxygen, combined with volume exclusion, accounts for the thermodynamics and solvation of TMAO in aqueous urea. As a result, TMAO behaves in a manner that is surprisingly similar to that of hard-spheres. There are two mandatory solvation sites. In plain water, these sites are occupied with water molecules, which are seamlessly replaced by urea, in proportion to its volume fraction. We discuss how this result gives an explanation both for the exceptionally strong exclusion of TMAO from peptide groups and for the experimentally observed synergy between urea and TMAO.
Virtually all organisms use organic osmolytes
to counter biochemical
stress.[1] The denaturant urea is among those
osmolytes and can occur as a stressor, e.g., in the kidney,[2] but it is also used against osmotic stress.[1] In either case, urea is found in mixtures with
at least one other osmolyte, typically a methylamine, such as trimethylamine-N-oxide (TMAO).[1] This compound
has generated considerable research interest, not only because it
is the strongest known protein stabilizer among the natural osmolytes[3] and a crystallizing agent;[4] it also has been found to correct medicinally significant
issues, such as prion aggregation[5] and
cellular folding defects.[6]It has
remained somewhat elusive what the mechanism of TMAO’s
action on protein is, and how it counters the denaturing effect of
urea. The range of opinions is broad and includes suggestions that
TMAO stabilizes proteins by classical preferential exclusion[7−14] or by altering the structure of water[15−17] and that TMAO counteracts
urea by directly interacting with urea,[18,19] by urea-independent
preferential exclusion from the protein,[7,20−22] or by reverting changes of the structure of water caused by urea.[15] Since many of these ideas have to do with the
bulk solution, it is expedient to focus on ternary mixtures of TMAO
with urea in water.Here we report thermodynamic experiments
that are combined with
rigorous statistical mechanics[23] to derive
structural properties of the solution.[24] This so-called Kirkwood–Buff approach provides a link between
thermodynamics and preferential interactions on the one side and the
structure of the solution on the other.[11,12,25−27] The basic idea of this approach
is that deviations from random distribution of molecules around each
other produce characteristic changes in the partial molar volumes
and chemical activities of the solution components,[23]and that conversely knowledge of these thermodynamic properties
allows us to derive information about the proximity of molecules in
solution.[24] The so-called Kirkwood–Buff
integrals (integrated pair correlation functions) are a measure of
the excess or deficit of one type of molecule around another.[23]Using this Kirkwood–Buff approach,
we find that, in aqueous
urea, TMAO behaves as if it were a hard-sphere gas and the effective
size of the hard-sphere depends on its occupancy with either water
or urea molecules at two mandatory solvation sites. This result gives
a rationale for the strong exclusion of TMAO from peptide groups,[9,28] which is substantially enhanced by the water/urea spacers intercalated
between TMAO and the peptide group. It also explains the experimentally
observed (though small)[20] synergy between
urea and TMAO, which is caused by the increased exclusion of TMAO
from the peptide group, as small spacers (water) are replaced by larger
ones (urea).
Results
The primary goal here is to derive the solvation
behavior of aqueous
mixtures of urea and TMAO, which requires partial molar volumes and
chemical activities of the solution components (see eqs 16 and 17).
Volumes
The partial molar volumes are shown in Figure 1, where the horizontal lines represent the limiting
values in plain water. The partial molar volumes of both urea (top
panel) and TMAO (bottom panel) depend very little on the concentration
of the respective other osmolyte within the range of concentrations
used in the vapor pressure experiments (∼3 M). The partial
molar volume of water is virtually unchanged (not shown). Our data
on urea compare favorably with previous data reported by Lee and Chalikian[29] (points in the top panel of Figure 1). The partial molar volume of TMAO comes very close to the
data reported by Di Michele et al.[30] (points
in the bottom panel of Figure 1). However,
there is a slight offset. This could be due to deviations between
the assumed and actual concentrations of TMAO. Di Michele et al. used
a very hygroscopic[31] preparation of anhydrous
TMAO without further treatment, and their data become identical with
ours if we assume that their TMAO contained 3–4% water.
Figure 1
Partial molar volumes of urea and TMAO
in their ternary mixtures
with water. Straight horizontal lines represent limiting partial molar
volumes in plain water. Top panel: urea partial molar volume (thick
lines) in 0 m, 2 m, 4 m, and 6 m TMAO (bottom to top). Propagated fitting
errors are given by thin lines, and points represent previous data.[29] Bottom panel: Same for TMAO in 0–15 m urea (3 m steps from bottom to top).
Points are literature data.[30] The parameters
from a fit of the density data to eq 7 are given
in Table 1.
Partial molar volumes of urea and TMAO
in their ternary mixtures
with water. Straight horizontal lines represent limiting partial molar
volumes in plain water. Top panel: urea partial molar volume (thick
lines) in 0 m, 2 m, 4 m, and 6 m TMAO (bottom to top). Propagated fitting
errors are given by thin lines, and points represent previous data.[29] Bottom panel: Same for TMAO in 0–15 m urea (3 m steps from bottom to top).
Points are literature data.[30] The parameters
from a fit of the density data to eq 7 are given
in Table 1.
Table 1
Density Fitting Results to Eq 7 in mL/mol
v̅1,0
44.2
v̅0,1
73.4
v̅2,0/(10–3/m)
276
v̅0,2/(1/m)
–1.1
v̅3,0/(10–3/m2)
–48
v̅0,3/(1/m2)
0.11
v̅4,0/(10–3/m3)
7
v̅0,4/(10–3/m3)
7
v̅5,0/(10–3/m4)
–0.5
v̅0,5/(10–3/m4)
0
v̅1,1/(10–3/m)
–41
v̅1,3/(10–3/m3)
–8
v̅1,2/(10–3/m2)
77
v̅2,2/(10–3/m3)
–8
v̅2,1/(10–3/m2)
4
v̅3,1/(10–3/m3)
0.5
Osmotic Coefficient and Activity Coefficients
The osmotic
coefficient data are shown in Figure 2 along
with the fit (eq 12). Our urea data (thin open
circles) compare well with previous data (thick open circles).[32] The osmotic coefficient of TMAO (filled circles)
is symptomatic for molecules that have repulsion between each other.[33] We decided to sample the osmotic coefficient
of a 2:1 mixture of urea:TMAO (triangles), because this is a ratio
found in living organisms.[34,35] At this ratio, the
osmotic coefficient remains close to unity; i.e., the water behaves
close to ideally in the molality scale.
Figure 2
Osmotic coefficients
and activity coefficients in aqueous mixtures
of urea with TMAO. (Top panel) Osmotic coefficients. Lines are the
fit: blue, addition of urea to water (solid) or 1 m TMAO (dashed); red, addition of TMAO to water (solid) or 1 m urea (dashed); magenta, urea/TMAO = 2/1. Data: thin open
circles, urea in water (this work); thick open circles, urea in water;[32] open squares, urea in 1 m TMAO;
filled circles, TMAO in water; filled squares, TMAO in 1 m urea; triangles, urea/TMAO = 2/1. Error bars show the standard deviation
of three to nine measurements. (Bottom panel) Molar activity coefficients
as a function of the TMAO concentration: red lines, γc of TMAO; blue lines, γc of urea. The successively
shorter lines that are offset relative to unity correspond to 0–3
M urea, spaced by 0.5 M increments.
The molar activity coefficients
can be described as previously by[33]where i stands for either
urea (U) or TMAO (T). The parameters c1, and c2, are the inverse effective volumes occupied by a single osmolyte
and a pair of osmolyte molecules, and g2, is an interaction parameter. The parameter γ0 accounts for the effect of the second osmolyte on the infinite
dilution activity coefficient of the first one. All parameters depend
on the other osmolyte’s concentration, e.g.,The parameters are given in Table 2.
Table 2
Parameters for the Second-Order Polynomials
for Each Parameter in Eq 1, for Either Urea
(U) or TMAO (T): Given Are the Zeroth-, First-, and Second-Order Coefficients
for a Second-Order Polynomial of the Type Given by Eq 2
0th
1st
2nd
c1,T
1.453 M
–0.040
0
c2,T
2.066 M
–0.078
0
g2,T
8.311 M
0.022
0.030/M
γ0,T
1
0.074
0
c1,U
19.84 M
–6.1
1.32/M
c2,U
11.02 M
0
0
g2,U
21.14 M
–3.94
0
γ0,U
1
0.11
0
Osmotic coefficients
and activity coefficients in aqueous mixtures
of urea with TMAO. (Top panel) Osmotic coefficients. Lines are the
fit: blue, addition of urea to water (solid) or 1 m TMAO (dashed); red, addition of TMAO to water (solid) or 1 m urea (dashed); magenta, urea/TMAO = 2/1. Data: thin open
circles, urea in water (this work); thick open circles, urea in water;[32] open squares, urea in 1 m TMAO;
filled circles, TMAO in water; filled squares, TMAO in 1 m urea; triangles, urea/TMAO = 2/1. Error bars show the standard deviation
of three to nine measurements. (Bottom panel) Molar activity coefficients
as a function of the TMAO concentration: red lines, γc of TMAO; blue lines, γc of urea. The successively
shorter lines that are offset relative to unity correspond to 0–3
M urea, spaced by 0.5 M increments.The resulting molar activity coefficients (Figure 2, bottom panel) depend primarily on the molarity
of TMAO,
and to a much lesser degree on the molarity of urea. For example,
the change in γc,U (blue lines) as a function of
TMAO (going from left to right) is several fold larger than as a function
of urea (going from the uppermost curve to the lowest). For this reason,
γc is plotted as a function of the TMAO concentration.
Both activity coefficients increase upon addition of the respective
other osmolyte, suggesting mild mutual exclusion.[33] This effect is, however, small compared to the strong increase
of the activity coefficient of TMAO with its own concentration (see
bottom panel of Figure 2).
Solvation
From the combined volumetric and osmometric
data we derived the Kirkwood–Buff integrals (KBIs) of all components
in the ternary mixture, using eq 16. Remember
that the KBIs are a measure of the excess or deficit of one type of
molecule around another type. The results are shown in Figure 3. The first observation is that again, as in the
case of the activity coefficients (Figure 2), all concentration dependencies are almost exclusively due to TMAO.
That is, the change along the TMAO axis is generally larger than the
urea-dependent offset within each group of curves. Only the self-solvation
KBIs of the osmolytes UU and TT depend slightly on the concentration
of urea. Thus the cluster of lines corresponding to increasing urea
concentration becomes visible in these two cases. The urea concentration
increases from the highest line (0 m) to the lowest
one (3.6 m) in both cases. The overall level of the
TMAO self-solvation, TT, is at least 3 times more
negative than expected for an osmolyte of its size. The magnitude
of TT is in the order of that of
disaccharides.[37] But as expected,[37] the hydration terms WT, WU, and WW are small in comparison.
Figure 3
Solvation
in aqueous mixtures of urea with TMAO. The Kirkwood–Buff
integrals for hydration
of urea (cyan), TMAO (blue), and water (black) are given separately
(top panel) to avoid overlap with UU. The data are given as a function
of the TMAO molarity in clusters of curves that correspond to increasing
urea concentrations (starting form zero, offset in increments of 0.4 m). The propagated fitting error is smaller than 0.001 L/mol
for hydration, and smaller than 0.01 L/mol for osmolyte–osmolyte
interaction.
Solvation
in aqueous mixtures of urea with TMAO. The Kirkwood–Buff
integrals for hydration
of urea (cyan), TMAO (blue), and water (black) are given separately
(top panel) to avoid overlap with UU. The data are given as a function
of the TMAO molarity in clusters of curves that correspond to increasing
urea concentrations (starting form zero, offset in increments of 0.4 m). The propagated fitting error is smaller than 0.001 L/mol
for hydration, and smaller than 0.01 L/mol for osmolyte–osmolyte
interaction.
Hard-Sphere-like Behavior of TMAO
Figure 4 demonstrates that TMAO closely follows a solvation pattern
expected for a hard-sphere gas, i.e., a system in which the one and
only interaction between molecules is hard-core repulsion (molecules
cannot overlap each other). At low concentrations, such spheres occupy
the space randomly. As the concentration increases, their proximity
is determined by the question of how well they can be packed. The
lower panel shows TT at 0 M urea (continuous red
line), along with three sets of predictions according to the Carnahan–Starling
equation for hard-spheres (eq 23), using the
partial molar volumes for TMAO shown in Figure 1. TMAO actually behaves like a hard-sphere of the size of a doubly
hydrated TMAO molecule. This solvation pattern makes sense, because
it is known that TMAO is strongly hydrated by two water molecules.[22,37,38] Naturally, though TMAO has a
very compact shape, it is not literally a perfect sphere. But TMAO
shows a remarkable similarity to the solvation expected for an ideal
hard-sphere.
Figure 4
Hard-sphere like behavior
of TMAO. The upper panel shows the TMAO
hydration, WT (blue), and the water self-hydration, WW (gray), at 0 M urea, along
with the hard-sphere behavior calculated for 0 to 2 hydration waters,
using eqs 24 and 25. The
lower panel contains the same information for the TMAO self-solvation, TT (red), at 0 M urea (continuous
red line) and in the limit of 0 M TMAO (dashed red line). The latter
is shown as a function of the urea molarity, and the dash-dotted line
is calculated according to eq 5. The deviations
between the best prediction and the data are smaller than the uncertainty
in the data (∼10 mL/mol).
The hard-sphere like behavior can be further tested
by investigating the TMAO hydration, WT, shown in the upper panel
of Figure 4. Also this KBI perfectly matches
the model of a hydrated hard-sphere that has the size of a doubly
hydrated TMAO molecule (eq 24). The same behavior
is found with the water self-hydration, WW (Figure 4, top panel). There is no straightforward way to calculate the other,
urea-related KBIs from the hard-sphere model.Hard-sphere like behavior
of TMAO. The upper panel shows the TMAO
hydration, WT (blue), and the water self-hydration, WW (gray), at 0 M urea, along
with the hard-sphere behavior calculated for 0 to 2 hydration waters,
using eqs 24 and 25. The
lower panel contains the same information for the TMAO self-solvation, TT (red), at 0 M urea (continuous
red line) and in the limit of 0 M TMAO (dashed red line). The latter
is shown as a function of the urea molarity, and the dash-dotted line
is calculated according to eq 5. The deviations
between the best prediction and the data are smaller than the uncertainty
in the data (∼10 mL/mol).
Discussion
Much has been written about the interactions
among TMAO, urea,
and water in solution, and the main focus has been on the water interactions.
We start by first considering the hydration of TMAO, and then examine
the other (previously more neglected) binary interactions in solution,
and close with a discussion of water structure.
Strong, Two-fold Hydration of TMAO
Our finding that
aqueous TMAO behaves similarly to a hard-sphere of the size of TMAOdihydrate strongly suggests that TMAO has two mandatory hydration
waters. This is supported by various other lines of research. Anhydrous
TMAO cannot be produced by evaporating the two hydration waters; rather,
TMAO has to be sublimed at high temperature.[31]Ab initio calculations also show tightly coordinated
water.[39] Dielectric relaxation finds TMAO
as a dihydrate in solution, and in the same research the very large
enthalpy of H-bond formation was pointed out.[37] Based on NMR it was found that all TMAO in water is present as dihydrate.[38] A strong hydration of TMAO was also seen in
molecular dynamics simulations.[40] Raman
spectroscopy indicates that TMAO has at least three H-bonds from neighboring
water,[41] but the mere existence of H-bonded
waters does not necessarily imply that all (or even any) of them are
mandatory hydration waters. The spectroscopic observation that the
solvation shell of TMAO contains slower moving water molecules[42] may be at least in part due to the solvation
sites at the TMAO oxygen. Significantly, small angle scattering measurements
found that both wateroxygen and ureanitrogen are found around the
TMAO oxygen at hydrogen-bonded distances, with one hydrogen atom between.[19,43] Thus, both urea and water snap into hydrogen-bonded positions as
they approach the TMAO oxygen.
The Two Mandatory Ligands of TMAO Can Be Water Molecules, Urea
Molecules, or Both
It has been found both by Raman spectroscopy[30] and neutron/X-ray scattering[43] that TMAO does not self-aggregate. We can add now the significant
finding to which degree TMAO does not aggregate; viz., its self-solvation TT is indistinguishable from
that of a hard-sphere gas—there is no significant attraction.
According to the effective size of the hard-sphere, the TMAO must
be doubly hydrated, as discussed above. Upon addition of urea, these
waters are progressively replaced by urea molecules,[43] and this should lead to an increase of the effective hard-sphere
size. Indeed, TT changes upon urea addition
toward more negative values, which correspond to larger sphere diameters
(Figures 3 and 4), as
discussed in the following around eq 5.
Water and Urea Are Essentially Equivalent Ligands for TMAO
Is there actual (weak affinity) binding of urea to TMAO? Meersman et al. argued that urea binds to TMAO with an affinity that is comparable
to the interaction of urea with peptide groups.[43] However, they also pointed out that their analysis was
assuming a binding model, rather than the proper exchange model.[43] Therefore we reanalyze their data, as shown
in Figure 5 as continuous lines. We focus on
the first two reported binding events, because a potential third “urea
site” is barely populated.[43] The
reaction model iswhere T, U, and W represent
TMAO, urea, and water, respectively, and K1 and K2 are the exchange constants for
the two reactions. The populations for each species were calculated
and fit to the data numerically. The resulting “affinities”
are quite weak, so that the midpoint of the “binding”
of the first urea is around 7.5 M urea. In comparison, the midpoint
of the binding of urea to a peptide NH is around 4 M.[44] In the face of such weak affinities the question arises,
how do the exchange curves in Figure 5 compare
to random occupancy with water and urea? If we take the volume fraction
as an approximate model for the likelihood that a site is randomly
occupied by a species,[44] we first need
to consider that direct TMAO–TMAO interaction at the oxygen
site does not occur (see previous paragraph). So, we normalize the
volume fractions of water and urea to refer to the non-TMAO volume
(1 – ϕT), and obtain for the populations of
the three speciesThe resulting curves are shown as dashed lines
in Figure 5. The population of the dihydrate, pWW, closely follows the exchange curve, and
thus double occupancy with water is practically random. For the other
two species, there is a marginal deviation from random distribution,
such that the single urea species is populated slightly less than
random, and the double urea species slightly more. This view of nearly
random interaction is also supported by recent molecular dynamics
simulations, where TMAO was found to be equally H-bonded to water
and urea at about 35% by volume of each urea and water,[22] and a rough equivalence of both was noted.[40] The idea of random interaction of water and
urea with TMAO is also consistent with the spectroscopic finding that
there is no specific urea-TMAO binding.[45] A computational finding that both urea and water interact strongly
with TMAO[18] should then be taken to mean
that though both are strongly interacting with TMAO (judged by the
fact that the solvation sites are mandatory), they are about equally
strongly interacting (judged by the random interaction).
Figure 5
“Binding”
of urea to TMAO. Points are previously
measured data.[43] Continuous lines are global
fits of model eq 3 to the data (K1 = 4.6, K2 = 2.5). Dashed
lines are random encounters calculated according to volume fractions
(eq 4).
“Binding”
of urea to TMAO. Points are previously
measured data.[43] Continuous lines are global
fits of model eq 3 to the data (K1 = 4.6, K2 = 2.5). Dashed
lines are random encounters calculated according to volume fractions
(eq 4).From the concept of random occupancy we can also
predict the change
in TT upon addition of urea that
we observe in Figures 3 and 4. If we take the three populations of differently sized hard-spheres
(eq 4) as weights for the KBIs for the three
sphere sizes,we get very good agreement between the data
and the prediction as shown in Figure 4 (lower
panel, red dashed and black dash-dotted lines).
The Urea–TMAO Interaction UT Is Dominated by Steric Exclusion
Effects
From neutron and X-ray diffraction measurements Meersman
et al. derived the radial distribution function between a ureanitrogen
and the TMAO oxygen as shown in Figure 6 (blue
line).[43] Although there is a clear first
solvation peak corresponding to direct H-bonding, this peak does not
exceed unity much, which is indicative of massive steric exclusion.
This makes sense, considering that urea can approach the TMAO oxygen
only from that hemisphere that is not blocked by the nitrogen and
three methyl groups.
Figure 6
Radial distribution function of urea nitrogen around TMAO
oxygen:
blue line, data for about 2 M each of urea and TMAO;[43] red line, effect of direct steric exclusion between urea
and TMAO (eq 6). Top: schematic illustration
of the origin of the peaks for (A) direct H-bonding of urea to TMAO
and (B) solvent-separated H-bonding. TMAO oxygen and urea nitrogen
are boxed. Water atoms are displayed in gray.
Radial distribution function of ureanitrogen around TMAOoxygen:
blue line, data for about 2 M each of urea and TMAO;[43] red line, effect of direct steric exclusion between urea
and TMAO (eq 6). Top: schematic illustration
of the origin of the peaks for (A) direct H-bonding of urea to TMAO
and (B) solvent-separated H-bonding. TMAO oxygen and ureanitrogen
are boxed. Water atoms are displayed in gray.How do the data compare to a situation where urea
is excluded from
TMAO but randomly distributed beyond the limits of the TMAO molecule
(in a urea continuum)? Analytic integration of a 3D space with a TMAO-sized
spherical hole gives the contribution of the direct steric exclusion
to the radial distribution function aswhere rmin is
the minimal distance between urea and the TMAO oxygen (about 1.2 Å),[19] and rT is the effective
radius of dry TMAO (2.66 Å).[28] The
resulting curve is shown in red in Figure 6. Comparing the data (blue) with the steric contribution (red) reveals
more clearly the second solvation peak around 5.5 Å, which may
come from both the second ureanitrogen and water-separated urea–TMAO
pairs. Beyond this peak the radial distribution function levels off.
Significantly, the blue scattering curve integrates within error to
the same value as the red curve, viz., the measured ≈
– 90 mL/mol at ∼2 M TMAO. This result highlights the
dominance of steric exclusion, where the H-bonding related deviations
of the actual g(r) from eq 6 merely have an alignment effect that averages out
to zero.
Hydration of Urea and TMAO Is Unchanged upon Mixing
Previous findings support our observation that the hydration of the
osmolytes, TW and UW, hardly depends on osmolyte
concentration (except for the nonspecific hard-sphere-like behavior
of TW as a function of cTMAO). Near-infrared spectra do not show any evidence
that the hydration of either urea or TMAO changes upon mixing.[45] Also NMR, combined with molecular dynamics,
showed that the hydration shell structure of TMAO is maintained over
a wide concentration range.[46]
Water Structure
There are two schools of thought on
the origin of the behavior of osmolytes, viz. either direct interaction
of water/osmolyte with target molecules[7−14,26,27] (preferential interactions) or indirect effects through alterations
of the structure of water.[15,16] Typical uses of the
term “water structure” refer to just one small aspect
of the properties of water. Thus it is not surprising that one can
reach diametrically opposite conclusions regarding the effect of osmolytes
merely by choosing how the term “water structure” is
used.[13] It has been suggested that the
term “water structure” may be even undefinable in view
of such issues.[26] It is therefore expedient
to refer to the actual observations (e.g., H-bond angles) rather than
to use a word with multiple disparate uses.What is the appropriate
definition of “water structure” when we want to understand
the thermodynamics of the solution? Perhaps the most general definition
is given by the KBIs, which provide a rigorous link between the positions
of molecules in solution and thermodynamics.[23] The KBIs are directly linked with preferential interactions,[11,12,25−27] which means
that the school of thought that osmolytes act through preferential
interaction has a rigorous statistical mechanic backing. Does that
mean there is no place for the other school of thought? To answer
this question, we have to remember that the KBIs are integrated radial
distribution functions, so they are thermodynamically valid descriptions
of solution structure as well. And all the other measures of water
structure can be equally valid thermodynamically, to the degree to
which they explain the form of the KBI.There are two general
aspects of water structure: the bulk water
structure (related to WW) and the hydration structures
of the osmolytes (related to TW and UW). We already discussed some
of the latter above, and numerous more could be added.[10,13,16,17,22,38,47−53] The point is that it is by no means obvious how those findings could
be predictive of a significant change in any of the hydration KBIs, WW, TW, and UW. Specifically, Figure 3 shows that the water self-hydration, WW, changes very little as osmolyte
is added. The effect may be significant in terms of the precision
of the data (see Figure 4), but negligibly
small compared to the changes seen in the other KBI. Moreover, it
has been pointed out that WW does not even appear in the
Kirkwood–Buff expressions that describe the impact of osmolytes
on protein stability.[27] The other two hydration
KBI do explicitly occur in those expressions, but TW seems to be governed by mere
packing, as judged by its hard-sphere like behavior.
Conclusions
We have used a combination of our current
experimental volume and
chemical activity data with Kirkwood–Buff theory to elucidate
the behavior of TMAO in aqueous urea. A second look on scattering
data provided a strong confirmation and some additional insight. The
picture that emerges shows a dominant role of hydrogen bonding along
with simple steric exclusion. TMAO is a roughly spherical molecule
and behaves as such to a degree that its self-solvation and hydration
resemble the properties of a hard-sphere gas. However, it has two
mandatory solvation sites that can be occupied by water or urea, substantially
enlarging the effective hard-sphere diameter. The hydrogen bonding
at these sites is sufficiently strong to prevent both water and urea
from approaching the oxygen with anything else other than their hydrogen
atoms.What implications does this have for osmolyte–protein
interactions?
It is well known that TMAO is strongly excluded from peptide groups.[3,8,9,28] Such
preferential exclusion (also termed “osmophobicity” [9]) favors the native state because the denatured
state exposes more surface, leading to more exclusion.[9] Aqueous TMAO appears to interact with the peptide groups
only through its hydration waters.[38,40] Thus, the
H-bonds donated to the TMAO from peptide groups must be significantly
weaker than those donated from water and urea. So, in the presence
of TMAO but absence of urea, the peptide groups will be preferentially
hydrated, with at least one water layer between peptide and TMAO—just
because TMAO will only hydrogen-bond to the peptide through an intercalated
water.What is then expected upon addition of urea is that the
situation
does not fundamentally change. The only difference is that now TMAO
has the option to interact with the peptide group through either an
intercalated urea, or an intercalated water. The mechanism of stabilization
by TMAO does not change as urea is added. Only the spacing between
TMAO and the peptide groups is increased as the TMAO solvation waters
are replaced by urea. That is, TMAO should be more excluded and become
a more potent protein stabilizer in the presence of urea than in its
absence. Indeed, a slight trend to larger “m-values” of TMAO in the presence of urea has been observed[20] (m-values are a measure of
how potent an osmolyte is in stabilizing a protein). Conversely, if
TMAO becomes a more potent stabilizer in the presence of urea, then
urea must become less effective as a denaturant for
symmetry reasons (Maxwell relations).[20,54] A similar
trend to synergy has been found with mixtures of sarcosine (another
methylamine) with urea,[54] raising the question
whether similar principles apply to other osmolytes as well.
Materials and Methods
Densimetry
TMAO dihydrate from Sigma and ultrapure
urea from USB were dried at 60 °C for at least 20 h. The masses
used to prepare the solutions were measured using a Mettler Toledo
AT20 analytical balance equipped with an antistatic device. The densities
of the solutions were measured in an Anton Paar DMA 5000M density
meter, using automatic viscosity correction.
Vapor Pressure Osmometry
The TMAO dihydrate used for
the osmotic coefficient measurements was freshly synthesized and recrystallized.[55] The water vapor pressure was measured in a Wescor
Vapro 5520 osmometer[8,56,57] with modifications described previously.[58] The measured osmolality values were divided by the total molality
of urea and TMAO to obtain the osmotic coefficient, which is a measure
of the deviation of the water chemical activity from ideal behavior.
Volume Data Evaluation
The density of the ureaTMAO
mixtures was measured to obtain the partial molar volumes. Using Wolfram
Mathematica, the data were fit to the relationwhere the numerator is the mass of the solution
per kg of water and the denominator the volume per kg of water (note
that the molecular weights M have to be given in kg/mol). Among the parameters, ρ0 is the density of plain water, v̅1,0 and v̅0,1 are the limiting
partial molar volume in plain water (of urea and TMAO, respectively),
and the v̅ terms in general are mixed derivatives of the volume with
respect to the molalities of urea and TMAO, mU and mT. The partial molar volumes
of urea and TMAO are thenand the partial molar volume of waterdirectly follows, knowing the molar concentrations
of urea and TMAO (cU and cT) and the molecular weights of all species (18.015, 60.06,
and 75.11 g/mol), and considering[28]
Vapor Pressure Data Evaluation
The vapor pressure data
were used to derive the chemical activities of urea and TMAO through
the method of Schönert.[59] The osmotic
coefficient data were fitted toand it was found that terms up to second order
are sufficient. There are additional isopiestic data available on
the dependence of ϕ on urea concentration in the absence of
TMAO.[32] Including these data requires terms
up to seventh order in urea concentration. Equations for the chemical
activities of water, urea, and TMAO follow directly:[59]
Kirkwood–Buff Integrals
Solvation properties
can be calculated from the partial molar volumes and chemical activities
as follows. The excess or deficit of molecules of type i and j around each other (relative to the bulk)
is given by integrated pair correlation functions, the so-called KBIs,[23]where the elements of matrix A are given byHere, κ is the compression coefficient,
δ the Kronecker
delta, T the absolute temperature, R the gas constant, |A| the determinant of A, and |A| denotes a cofactor of the matrix. After eq 17 is substituted into eq 16, κ has little impact on . This is because κ is then not in an isolated position
in the denominator any more, and is negligibly small for our purposes,[60] so we just set it to its value in plain water.[61] In order to link the derivatives in this equation
back to the vapor pressure results, they are rewritten as eitherfor all cases except when i = k = W, orby use of the Gibbs–Duhem relation.
Kirkwood–Buff Integrals for Hard-Spheres
As
shown in the Results section, TMAO behaves
like a hard-sphere gas in urea solution. Calculating the KBIs for
hard-spheres is conveniently done through the Carnahan–Starling
equation.[62] Though this relation is for
a single-component hard-sphere gas, it is possible to infer the implicit
properties of the water as follows. In a two-component solution (here,
water and TMAO), the KBIs areandfor the self-solvation of TMAO and self-hydration
of water, andfor the hydration of TMAO,[36] where a =
(∂ ln a/∂ ln c) and γ = (∂ ln a/∂ c). The molar activity coefficient
of component i is γ. From eq 22 we see that aWW = aTTv̅W/v̅T holds. Taking
into account γWW = (aWW – 1)/cW allows use of eqs 20 to 22 to obtain WW and WT from TT, if aTT and the partial molar volumes are known:Multiplying the Carnahan–Starling
equation for a hard-sphere gas[62] by the
concentration c and
performing a derivative with respect to cS gives aSS(63) as follows:where ϕ = cSv̅S is the volume fraction of the
hard-sphere, cS its molarity, and v̅S its partial molar volume. Equation 26 can then be used in place of aTT to calculate the various KBIs (eqs 23–25). When the size of the hard-spheres
is different from v̅T, we change v̅T in eq 23 accordingly.
That is, the partial molar volume of TMAO mono- or dihydrate is larger
than that of TMAO itself. However, when it comes to the partial molar
volume in the context of WT, there is no such thing as
a mono- or dihydrate. This is because WT considers the spacing between
TMAO and the surrounding water molecules independently of whether
or not they are mandatory hydration waters. Accordingly, we do not
change v̅T in eq 24 when the size of the hard-spheres is assumed to be different
from v̅T.Note that in the
limit of cS→0,
we recover the classically expected result for the excluded
volume (equaling the second virial coefficient), WT – TT = 4v̅.[63]
Authors: Deepak R Canchi; Pruthvi Jayasimha; Donald C Rau; George I Makhatadze; Angel E Garcia Journal: J Phys Chem B Date: 2012-10-01 Impact factor: 2.991
Authors: Allan Chris M Ferreon; Mahdi Muhammad Moosa; Yann Gambin; Ashok A Deniz Journal: Proc Natl Acad Sci U S A Date: 2012-07-23 Impact factor: 11.205