Literature DB >> 11502004

The osmophobic effect: natural selection of a thermodynamic force in protein folding.

D W Bolen1, I V Baskakov.   

Abstract

Intracellular organic osmolytes are present in certain organisms adapted to harsh environments and these osmolytes protect intracellular macromolecules against the denaturing environmental stress. In natural selection of organic osmolytes as protein stabilizers, it appears that the osmolyte property selected for is the unfavorable interaction between the osmolyte and the peptide backbone, a solvophobic thermodynamic force that we call the osmophobic effect. Because the peptide backbone is highly exposed to osmolyte in the denatured state, the osmophobic effect preferentially raises the free energy of the denatured state, shifting the equilibrium in favor of the native state. By focusing the solvophobic force on the denatured state, the native state is left free to function relatively unfettered by the presence of osmolyte. The osmophobic effect is a newly uncovered thermodynamic force in nature that complements the well-recognized hydrophobic interactions, hydrogen bonding, electrostatic and dispersion forces that drive protein folding. In organisms whose survival depends on the intracellular presence of osmolytes that can counteract denaturing stresses, the osmophobic effect is as fundamental to protein folding as these well-recognized forces.

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Year:  2001        PMID: 11502004     DOI: 10.1006/jmbi.2001.4819

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  137 in total

1.  Thermodynamic dissection of the intrinsically disordered N-terminal domain of human glucocorticoid receptor.

Authors:  Jing Li; Hesam N Motlagh; Carolyn Chakuroff; E Brad Thompson; Vincent J Hilser
Journal:  J Biol Chem       Date:  2012-06-04       Impact factor: 5.157

2.  Protein stability in mixed solvents: a balance of contact interaction and excluded volume.

Authors:  John A Schellman
Journal:  Biophys J       Date:  2003-07       Impact factor: 4.033

Review 3.  Protein structure, stability and solubility in water and other solvents.

Authors:  C Nick Pace; Saul Treviño; Erode Prabhakaran; J Martin Scholtz
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2004-08-29       Impact factor: 6.237

4.  The efficiency of different salts to screen charge interactions in proteins: a Hofmeister effect?

Authors:  Raul Perez-Jimenez; Raquel Godoy-Ruiz; Beatriz Ibarra-Molero; Jose M Sanchez-Ruiz
Journal:  Biophys J       Date:  2004-04       Impact factor: 4.033

5.  Predicting the energetics of osmolyte-induced protein folding/unfolding.

Authors:  Matthew Auton; D Wayne Bolen
Journal:  Proc Natl Acad Sci U S A       Date:  2005-10-07       Impact factor: 11.205

6.  Inhibition of protein aggregation in vitro and in vivo by a natural osmoprotectant.

Authors:  Zoya Ignatova; Lila M Gierasch
Journal:  Proc Natl Acad Sci U S A       Date:  2006-08-09       Impact factor: 11.205

7.  Unfolding and refolding of bovine serum albumin at acid pH: ultrasound and structural studies.

Authors:  N El Kadi; N Taulier; J Y Le Huérou; M Gindre; W Urbach; I Nwigwe; P C Kahn; M Waks
Journal:  Biophys J       Date:  2006-07-21       Impact factor: 4.033

8.  Effect of osmotic stress and heat shock in recombinant protein overexpression and crystallization.

Authors:  Natalia Oganesyan; Irina Ankoudinova; Sung-Hou Kim; Rosalind Kim
Journal:  Protein Expr Purif       Date:  2006-10-10       Impact factor: 1.650

9.  Solvation free energy of the peptide group: its model dependence and implications for the additive-transfer free-energy model of protein stability.

Authors:  Dheeraj S Tomar; D Asthagiri; Valéry Weber
Journal:  Biophys J       Date:  2013-09-17       Impact factor: 4.033

Review 10.  Proline mechanisms of stress survival.

Authors:  Xinwen Liang; Lu Zhang; Sathish Kumar Natarajan; Donald F Becker
Journal:  Antioxid Redox Signal       Date:  2013-05-23       Impact factor: 8.401

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