Literature DB >> 12850152

Osmolyte effects on kinetics of FKBP12 C22A folding coupled with prolyl isomerization.

Andrew T Russo1, Jörg Rösgen, D W Bolen.   

Abstract

Unfolding and refolding kinetics of human FKBP12 C22A were monitored by fluorescence emission over a wide range of urea concentration in the presence and absence of protecting osmolytes glycerol, proline, sarcosine and trimethylamine-N-oxide (TMAO). Unfolding is well described by a mono-exponential process, while refolding required a minimum of two exponentials for an adequate fit throughout the urea concentration range considered. The bi-exponential behavior resulted from complex coupling between protein folding, and prolyl isomerization in the denatured state in which the urea-dependent rate constant for folding was greater than, equal to, and less than the rate constants for prolyl isomerization within the urea concentration range of zero to five molar. Amplitudes and the observed folding and unfolding rate constants were fitted to a reversible three-state model composed of two sequential steps involving the native state and a folding-competent denatured species thermodynamically linked to a folding-incompetent denatured species. Excellent agreement between thermodynamic parameters for FKBP12 C22A folding calculated from the kinetic parameters and those obtained directly from equilibrium denaturation assays provides strong support for the applicability of the mechanism, and provides evidence that FKBP12 C22A folding/unfolding is two-state, with prolyl isomer heterogeneity in the denatured ensemble. Despite the chemical diversity of the protecting osmolytes, they all exhibit the same kinetic behavior of increasing the rate constant of folding and decreasing the rate constant for unfolding. Osmolyte effects on folding/unfolding kinetics are readily explained in terms of principles established in understanding osmolyte effects on protein stability. These principles involve the osmophobic effect, which raises the Gibbs energy of the denatured state due to exposure of peptide backbone, thereby increasing the folding rate. This effect also plays a key role in decreasing the unfolding rate when, as is often the case, the activated complex exposes more backbone than is exposed in the native state.

Entities:  

Mesh:

Substances:

Year:  2003        PMID: 12850152     DOI: 10.1016/s0022-2836(03)00626-0

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  14 in total

1.  Osmolyte-induced folding of an intrinsically disordered protein: folding mechanism in the absence of ligand.

Authors:  Yu-Chu Chang; Terrence G Oas
Journal:  Biochemistry       Date:  2010-06-29       Impact factor: 3.162

2.  Untangling a Structurally Resolved Protein Folding Intermediate.

Authors:  Matthew Auton
Journal:  Biophys J       Date:  2016-03-29       Impact factor: 4.033

3.  Single-Molecule Chemo-Mechanical Spectroscopy Provides Structural Identity of Folding Intermediates.

Authors:  Hesam N Motlagh; Dmitri Toptygin; Christian M Kaiser; Vincent J Hilser
Journal:  Biophys J       Date:  2016-03-29       Impact factor: 4.033

4.  Electrostatic effects on the folding stability of FKBP12.

Authors:  Jyotica Batra; Harianto Tjong; Huan-Xiang Zhou
Journal:  Protein Eng Des Sel       Date:  2016-07-05       Impact factor: 1.650

5.  Responsive modes of Medicago sativa proline dehydrogenase genes during salt stress and recovery dictate free proline accumulation.

Authors:  Gadi Miller; Hanan Stein; Arik Honig; Yoram Kapulnik; Aviah Zilberstein
Journal:  Planta       Date:  2005-04-05       Impact factor: 4.116

6.  Cosolutes, Crowding, and Protein Folding Kinetics.

Authors:  Annelise H Gorensek-Benitez; Austin E Smith; Samantha S Stadmiller; Gerardo M Perez Goncalves; Gary J Pielak
Journal:  J Phys Chem B       Date:  2017-06-29       Impact factor: 2.991

7.  Hyperosmotic stress signaling to the nucleus disrupts the Ran gradient and the production of RanGTP.

Authors:  Joshua B Kelley; Bryce M Paschal
Journal:  Mol Biol Cell       Date:  2007-08-29       Impact factor: 4.138

Review 8.  What's new about osmotic regulation of glycerophosphocholine.

Authors:  Morgan Gallazzini; Maurice B Burg
Journal:  Physiology (Bethesda)       Date:  2009-08

Review 9.  Slow unfolding of monomeric proteins from hyperthermophiles with reversible unfolding.

Authors:  Atsushi Mukaiyama; Kazufumi Takano
Journal:  Int J Mol Sci       Date:  2009-03-24       Impact factor: 6.208

10.  Hydrogen bonding progressively strengthens upon transfer of the protein urea-denatured state to water and protecting osmolytes.

Authors:  Luis Marcelo F Holthauzen; Jörg Rösgen; D Wayne Bolen
Journal:  Biochemistry       Date:  2010-02-16       Impact factor: 3.162

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.