Literature DB >> 17327389

An analysis of the molecular origin of osmolyte-dependent protein stability.

Jörg Rösgen1, B Montgomery Pettitt, David Wayne Bolen.   

Abstract

Protein solvation is the key determinant for isothermal, concentration-dependent effects on protein equilibria, such as folding. The required solvation information can be extracted from experimental thermodynamic data using Kirkwood-Buff theory. Here we derive and discuss general properties of proteins and osmolytes that are pertinent to their biochemical behavior. We find that hydration depends very little on osmolyte concentration and type. Strong dependencies on both osmolyte concentration and type are found for osmolyte self-solvation and protein-osmolyte solvation changes upon unfolding. However, solvation in osmolyte solutions does not involve complex concentration dependencies as found in organic molecules that are not used as osmolytes in nature. It is argued that the simple solvation behavior of naturally occurring osmolytes is a prerequisite for their usefulness in osmotic regulation in vivo.

Mesh:

Substances:

Year:  2007        PMID: 17327389      PMCID: PMC2203340          DOI: 10.1110/ps.062671607

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  37 in total

1.  Osmotic stress, crowding, preferential hydration, and binding: A comparison of perspectives.

Authors:  V A Parsegian; R P Rand; D C Rau
Journal:  Proc Natl Acad Sci U S A       Date:  2000-04-11       Impact factor: 11.205

2.  Determination of the volumetric properties of proteins and other solutes using pressure perturbation calorimetry.

Authors:  Lung-Nan Lin; John F Brandts; J Michael Brandts; Valerian Plotnikov
Journal:  Anal Biochem       Date:  2002-03-01       Impact factor: 3.365

3.  Estimating hydration changes upon biomolecular reactions from osmotic stress, high pressure, and preferential hydration experiments.

Authors:  Seishi Shimizu
Journal:  Proc Natl Acad Sci U S A       Date:  2004-01-19       Impact factor: 11.205

4.  Volumetric effects of ionization of amino and carboxyl termini of alpha,omega-aminocarboxylic acids.

Authors:  Nicolas Taulier; Tigran V Chalikian
Journal:  Biophys Chem       Date:  2003-05-01       Impact factor: 2.352

Review 5.  Uncovering the basis for nonideal behavior of biological molecules.

Authors:  Jörg Rösgen; Bernard Montgomery Pettitt; David Wayne Bolen
Journal:  Biochemistry       Date:  2004-11-16       Impact factor: 3.162

6.  A contribution to the theory of preferential interaction coefficients.

Authors:  J Michael Schurr; David P Rangel; Sergio R Aragon
Journal:  Biophys J       Date:  2005-07-29       Impact factor: 4.033

Review 7.  Analysis of effects of salts and uncharged solutes on protein and nucleic acid equilibria and processes: a practical guide to recognizing and interpreting polyelectrolyte effects, Hofmeister effects, and osmotic effects of salts.

Authors:  M T Record; W Zhang; C F Anderson
Journal:  Adv Protein Chem       Date:  1998

Review 8.  On volume changes accompanying conformational transitions of biopolymers.

Authors:  T V Chalikian; K J Bresiauer
Journal:  Biopolymers       Date:  1996-11       Impact factor: 2.505

9.  Differences in water release for the binding of EcoRI to specific and nonspecific DNA sequences.

Authors:  N Y Sidorova; D C Rau
Journal:  Proc Natl Acad Sci U S A       Date:  1996-10-29       Impact factor: 11.205

10.  The thermodynamics of solvent exchange.

Authors:  J A Schellman
Journal:  Biopolymers       Date:  1994-08       Impact factor: 2.505

View more
  29 in total

1.  Kirkwood-Buff integrals for ideal solutions.

Authors:  Elizabeth A Ploetz; Nikolaos Bentenitis; Paul E Smith
Journal:  J Chem Phys       Date:  2010-04-28       Impact factor: 3.488

Review 2.  Recent applications of Kirkwood-Buff theory to biological systems.

Authors:  Veronica Pierce; Myungshim Kang; Mahalaxmi Aburi; Samantha Weerasinghe; Paul E Smith
Journal:  Cell Biochem Biophys       Date:  2007-11-28       Impact factor: 2.194

3.  Urea orientation at protein surfaces.

Authors:  Xin Chen; Laura B Sagle; Paul S Cremer
Journal:  J Am Chem Soc       Date:  2007-11-15       Impact factor: 15.419

4.  Macromolecular crowding modulates folding mechanism of alpha/beta protein apoflavodoxin.

Authors:  Dirar Homouz; Loren Stagg; Pernilla Wittung-Stafshede; Margaret S Cheung
Journal:  Biophys J       Date:  2009-01       Impact factor: 4.033

5.  Distinctive solvation patterns make renal osmolytes diverse.

Authors:  Ruby Jackson-Atogi; Prem Kumar Sinha; Jörg Rösgen
Journal:  Biophys J       Date:  2013-11-05       Impact factor: 4.033

6.  Kirkwood-Buff theory of molecular and protein association, aggregation, and cellular crowding.

Authors:  Moon Bae Gee; Paul E Smith
Journal:  J Chem Phys       Date:  2009-10-28       Impact factor: 3.488

7.  Fluctuation theory of molecular association and conformational equilibria.

Authors:  Yuanfang Jiao; Paul E Smith
Journal:  J Chem Phys       Date:  2011-07-07       Impact factor: 3.488

8.  Putting the Piezolyte Hypothesis under Pressure.

Authors:  Christina M Papini; Pranav P Pandharipande; Catherine A Royer; George I Makhatadze
Journal:  Biophys J       Date:  2017-08-10       Impact factor: 4.033

9.  Thermodynamic and structural basis for relaxation of specificity in protein-DNA recognition.

Authors:  Paul J Sapienza; Tianyi Niu; Michael R Kurpiewski; Arabela Grigorescu; Linda Jen-Jacobson
Journal:  J Mol Biol       Date:  2013-09-14       Impact factor: 5.469

10.  Osmolyte solutions and protein folding.

Authors:  Char Y Hu; B Montgomery Pettitt; Joerg Roesgen
Journal:  F1000 Biol Rep       Date:  2009-05-28
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.