Literature DB >> 16113118

Protein folding, stability, and solvation structure in osmolyte solutions.

Jörg Rösgen1, B Montgomery Pettitt, David Wayne Bolen.   

Abstract

An understanding of the impact of the crowded conditions in the cytoplasm on its biomolecules is of clear importance to biochemical, medical, and pharmaceutical science. Our previous work on the use of small biochemical compounds to crowd protein solutions indicates that a quantitative description of their nonideal behavior is possible and straightforward. Here, we show the structural origin of the nonideal solution behavior. We discuss the consequences of these findings regarding protein folding stability and solvation in crowded solutions through a structural analysis of the m-value or the change in free-energy difference of a macromolecule in solution with respect to the concentration of a third component.

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Year:  2005        PMID: 16113118      PMCID: PMC1366796          DOI: 10.1529/biophysj.105.067330

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  40 in total

1.  The linkage between magnesium binding and RNA folding.

Authors:  Vinod K Misra; David E Draper
Journal:  J Mol Biol       Date:  2002-04-05       Impact factor: 5.469

2.  Cell biology: join the crowd.

Authors:  R John Ellis; Allen P Minton
Journal:  Nature       Date:  2003-09-04       Impact factor: 49.962

3.  The vapor pressure of aqueous solutions of alanine.

Authors:  R A ROBINSON
Journal:  J Biol Chem       Date:  1952-11       Impact factor: 5.157

Review 4.  Uncovering the basis for nonideal behavior of biological molecules.

Authors:  Jörg Rösgen; Bernard Montgomery Pettitt; David Wayne Bolen
Journal:  Biochemistry       Date:  2004-11-16       Impact factor: 3.162

5.  The Kirkwood-Buff theory and the effect of cosolvents on biochemical reactions.

Authors:  Seishi Shimizu; Chandra L Boon
Journal:  J Chem Phys       Date:  2004-11-08       Impact factor: 3.488

6.  Experimental data and modelling of apparent molar volumes, isentropic compressibilities and refractive indices in aqueous solutions of glycine + NaCl.

Authors:  A Soto; A Arce; M K Khoshkbarchi
Journal:  Biophys Chem       Date:  1998-09-14       Impact factor: 2.352

7.  Thermodynamic characterization of interactions of native bovine serum albumin with highly excluded (glycine betaine) and moderately accumulated (urea) solutes by a novel application of vapor pressure osmometry.

Authors:  W Zhang; M W Capp; J P Bond; C F Anderson; M T Record
Journal:  Biochemistry       Date:  1996-08-13       Impact factor: 3.162

8.  Denaturant m values and heat capacity changes: relation to changes in accessible surface areas of protein unfolding.

Authors:  J K Myers; C N Pace; J M Scholtz
Journal:  Protein Sci       Date:  1995-10       Impact factor: 6.725

9.  The thermodynamics of solvent exchange.

Authors:  J A Schellman
Journal:  Biopolymers       Date:  1994-08       Impact factor: 2.505

10.  Charge density-dependent strength of hydration and biological structure.

Authors:  K D Collins
Journal:  Biophys J       Date:  1997-01       Impact factor: 4.033

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  44 in total

1.  Reducing the dimensionality of the protein-folding search problem.

Authors:  George D Chellapa; George D Rose
Journal:  Protein Sci       Date:  2012-07-06       Impact factor: 6.725

2.  Sodium perchlorate effects on the helical stability of a mainly alanine peptide.

Authors:  Eliana K Asciutto; Ignacio J General; Kan Xiong; Kang Xiong; Sanford A Asher; Jeffry D Madura
Journal:  Biophys J       Date:  2010-01-20       Impact factor: 4.033

3.  Toward an accurate theoretical framework for describing ensembles for proteins under strongly denaturing conditions.

Authors:  Hoang T Tran; Rohit V Pappu
Journal:  Biophys J       Date:  2006-06-09       Impact factor: 4.033

4.  From the test tube to the cell: exploring the folding and aggregation of a beta-clam protein.

Authors:  Zoya Ignatova; Beena Krishnan; Jeffrey P Bombardier; Anna Marie C Marcelino; Jiang Hong; Lila M Gierasch
Journal:  Biopolymers       Date:  2007       Impact factor: 2.505

5.  Protein phase diagrams II: nonideal behavior of biochemical reactions in the presence of osmolytes.

Authors:  Allan Chris M Ferreon; Josephine C Ferreon; D Wayne Bolen; Jörg Rösgen
Journal:  Biophys J       Date:  2006-10-06       Impact factor: 4.033

6.  Protein folding is slaved to solvent motions.

Authors:  H Frauenfelder; P W Fenimore; G Chen; B H McMahon
Journal:  Proc Natl Acad Sci U S A       Date:  2006-10-09       Impact factor: 11.205

7.  An analysis of the molecular origin of osmolyte-dependent protein stability.

Authors:  Jörg Rösgen; B Montgomery Pettitt; David Wayne Bolen
Journal:  Protein Sci       Date:  2007-02-27       Impact factor: 6.725

Review 8.  Recent applications of Kirkwood-Buff theory to biological systems.

Authors:  Veronica Pierce; Myungshim Kang; Mahalaxmi Aburi; Samantha Weerasinghe; Paul E Smith
Journal:  Cell Biochem Biophys       Date:  2007-11-28       Impact factor: 2.194

9.  An extended dynamical hydration shell around proteins.

Authors:  Simon Ebbinghaus; Seung Joong Kim; Matthias Heyden; Xin Yu; Udo Heugen; Martin Gruebele; David M Leitner; Martina Havenith
Journal:  Proc Natl Acad Sci U S A       Date:  2007-12-19       Impact factor: 11.205

10.  Osmolytes modulate conformational exchange in solvent-exposed regions of membrane proteins.

Authors:  Ricardo H Flores Jiménez; Marie-Ange Do Cao; Miyeon Kim; David S Cafiso
Journal:  Protein Sci       Date:  2010-02       Impact factor: 6.725

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