Literature DB >> 16640449

The role of water coordination in binary mixtures. A study of two model amphiphilic molecules in aqueous solutions by molecular dynamics and NMR.

R Sinibaldi1, C Casieri, S Melchionna, G Onori, A L Segre, S Viel, L Mannina, F De Luca.   

Abstract

Two binary aqueous mixtures which contain the small amphiphilic molecules TMAO (trimethylamine-N-oxide) and TBA (tert-butyl alcohol) have been investigated by molecular dynamics simulations and NMR chemical shift and self-diffusion measurements. TMAO is an osmolyte, while TBA is a monohydrate alcohol. Both possess bulky hydrophobic groups and polar heads, namely, NO in TMAO and OH in TBA. The hydrophilic/hydrophobic content of these isosteric molecules strongly modulates the structure and dynamics of the hydration shell, which is thought to be responsible for the effects observed on proteins and phospholipids. Simulation results, especially on hydrogen-bond networking, spatial correlations, and self-diffusivity, are consistent with NMR data and agree well with previous numerical studies on similar solutions. The methods employed allow the elucidation of the microscopic features of the solutions. For TBA solutions, the hydration shell is found to have a low density and a large spatial spread, and thus, above the molar fraction of 0.03, reduction of hydrophobic hydration drives self-aggregation of the solute. This effect does not take place in TMAO solutions, where the hydration shell is more compact and stable, maintaining its structure over a wider range of solute concentrations.

Entities:  

Mesh:

Substances:

Year:  2006        PMID: 16640449     DOI: 10.1021/jp056897+

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  9 in total

1.  Dynamical Effects of Trimethylamine N-Oxide on Aqueous Solutions of Urea.

Authors:  Xiaojing Teng; Toshiko Ichiye
Journal:  J Phys Chem B       Date:  2019-01-28       Impact factor: 2.991

2.  Peptide conformational preferences in osmolyte solutions: transfer free energies of decaalanine.

Authors:  Hironori Kokubo; Char Y Hu; B Montgomery Pettitt
Journal:  J Am Chem Soc       Date:  2011-01-20       Impact factor: 15.419

3.  Backbone additivity in the transfer model of protein solvation.

Authors:  Char Y Hu; Hironori Kokubo; Gillian C Lynch; D Wayne Bolen; B Montgomery Pettitt
Journal:  Protein Sci       Date:  2010-05       Impact factor: 6.725

4.  Diffusion of aqueous solutions of ionic, zwitterionic, and polar solutes.

Authors:  Xiaojing Teng; Qi Huang; Chamila Chathuranga Dharmawardhana; Toshiko Ichiye
Journal:  J Chem Phys       Date:  2018-06-14       Impact factor: 3.488

5.  Counteraction of urea by trimethylamine N-oxide is due to direct interaction.

Authors:  Filip Meersman; Daniel Bowron; Alan K Soper; Michel H J Koch
Journal:  Biophys J       Date:  2009-11-04       Impact factor: 4.033

6.  Trimethylamine N-oxide influence on the backbone of proteins: an oligoglycine model.

Authors:  Char Y Hu; Gillian C Lynch; Hironori Kokubo; B Montgomery Pettitt
Journal:  Proteins       Date:  2010-02-15

7.  Volume exclusion and H-bonding dominate the thermodynamics and solvation of trimethylamine-N-oxide in aqueous urea.

Authors:  Jörg Rösgen; Ruby Jackson-Atogi
Journal:  J Am Chem Soc       Date:  2012-02-10       Impact factor: 15.419

8.  Dynamical Model for the Counteracting Effects of Trimethylamine N-Oxide on Urea in Aqueous Solutions under Pressure.

Authors:  Xiaojing Teng; Toshiko Ichiye
Journal:  J Phys Chem B       Date:  2020-02-27       Impact factor: 2.991

9.  Taurine Stabilizing Effect on Lysozyme.

Authors:  Leonardo Mastrella; Paolo Moretti; Silvia Pieraccini; Simona Magi; Silvia Piccirillo; Maria Grazia Ortore
Journal:  Life (Basel)       Date:  2022-01-17
  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.