| Literature DB >> 27645219 |
Aimilia Gastounioti1, Emily F Conant1, Despina Kontos2.
Abstract
BACKGROUND: The assessment of a woman's risk for developing breast cancer has become increasingly important for establishing personalized screening recommendations and forming preventive strategies. Studies have consistently shown a strong relationship between breast cancer risk and mammographic parenchymal patterns, typically assessed by percent mammographic density. This paper will review the advancing role of mammographic texture analysis as a potential novel approach to characterize the breast parenchymal tissue to augment conventional density assessment in breast cancer risk estimation. MAIN TEXT: The analysis of mammographic texture provides refined, localized descriptors of parenchymal tissue complexity. Currently, there is growing evidence in support of textural features having the potential to augment the typically dichotomized descriptors (dense or not dense) of area or volumetric measures of breast density in breast cancer risk assessment. Therefore, a substantial research effort has been devoted to automate mammographic texture analysis, with the aim of ultimately incorporating such quantitative measures into breast cancer risk assessment models. In this paper, we review current and emerging approaches in this field, summarizing key methodological details and related studies using novel computerized approaches. We also discuss research challenges for advancing the role of parenchymal texture analysis in breast cancer risk stratification and accelerating its clinical translation.Entities:
Keywords: Breast cancer risk; Digital mammography; Parenchymal texture analysis; Quantitative breast imaging
Mesh:
Year: 2016 PMID: 27645219 PMCID: PMC5029019 DOI: 10.1186/s13058-016-0755-8
Source DB: PubMed Journal: Breast Cancer Res ISSN: 1465-5411 Impact factor: 6.466
Key studies in automated parenchymal texture analysis for breast cancer risk assessment
| Study | Mammograms | Dataset | Breast sampling | Texture features | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Year | Participating institutions | F/D | View | A | B | S1 | S2 | T1 | T2 | T3 | T4 | T5 |
| Distinguishing or predicting cancer cases from controls | ||||||||||||
| Byng et al. (1997) [ | University of Toronto, Sunnybrook Health Science Centre, Ontario Cancer Institute | F | CC | 354P | 354 | x | x | x | ||||
| Torres-Mejia et al. (2005) [ | LSHTM, Guy’s Hospital, UNAM, IPOFG | F | CC/MLO | 111P | 3100 | x | x | x | ||||
| Wu et al. (2008) [ | University of Michigan | F | CC | 128C | 549 | x | x | |||||
| Manduca et al. (2009) [ | Mayo Clinic, Moffitt | F | CC/MLO | 246P | 522 | x | x | x | x | x | x | |
| Wei et al. (2011) [ | University of Michigan | F | CC | 136C | 246 | x | x | |||||
| Nielsen et al. (2011) [ | University of Copenhagen, Nordic Bioscience, Delft University of Technology, RadboudUMC, Mayo Clinic | F | MLO | 245P | 250 | x | x | x | ||||
| Brandt et al. (2011) [ | University of Copenhagen, RadboudUMC, Synarc Imaging Technologies | F | MLO | 245P | 245 | x | x | |||||
| Häberle et al. (2012) [ | Erlangen University Hospital, Fraunhofer Institute for Integrated Circuits IIS, IMPRS, UCLA | F | CC | 864C | 418 | x | x | x | x | x | x | |
| Li et al. (2012) [ | University of Chicago | D | CC | 75C | 328 | x | x | x | x | x | ||
| Chen et al. (2014) [ | University of Manchester | D | MLO | 50C | 50 | x | x | |||||
| Nielsen et al. (2014) [ | University of Copenhagen, Nordic Bioscience, Biomediq, RadboudUMC, Mayo Clinic | F | CC/MLO | 471P,C | 692 | x | x | x | ||||
| Li et al. (2014) [ | University of Chicago | D | CC | 75C | 328 | x | x | x | x | |||
| Karemore et al. (2014) [ | University of Copenhagen, RadboudUMC | F | MLO | 245P | 250 | x | x | x | ||||
| Zheng et al. (2015) [ | University of Pennsylvania | D | MLO | 106C | 318 | x | x | x | x | x | ||
| Sun et al. (2015) [ | University of Texas, China Northeastern University, University of Oklahoma, TTUHS, Guiyang Medical University | D | CC | 141P | 199 | x | x | x | x | |||
| Tan et al. (2015) [ | University of Texas, University of Oklahoma, University of Pittsburgh | D | CC/MLO | 812P | 1084 | x | x | x | x | x | ||
| Tan et al. (2015) [ | University of Oklahoma, University of Pittsburgh | D | CC/MLO | 430P | 440 | x | x | x | x | x | ||
| Predicting the risk of carrying a high-risk genetic mutation | ||||||||||||
| Huo et al. (2000) [ | University of Chicago | F | CC | 15 | 143 | x | x | x | x | |||
| Huo et al. (2002) [ | University of Chicago, University of Pennsylvania | F | CC | 30 | 142 | x | x | x | x | |||
| Li et al. (2004) [ | University of Chicago, University of Pennsylvania | F | CC | 30 | 60 | x | x | x | x | x | ||
| Li et al. (2005) [ | University of Chicago | F | CC | 30 | 142 | x | x | x | x | x | ||
| Li et al. (2007) [ | University of Chicago | F | CC | 30 | 142 | x | x | |||||
| Li et al. (2008) [ | University of Chicago | F | CC | 30 | 142 | x | x | |||||
| Li et al. (2012) [ | University of Chicago | D | CC | 53 | 328 | x | x | x | x | x | ||
| Li et al. (2014) [ | University of Chicago | D | CC | 53 | 328 | x | x | x | x | |||
| Gierach et al. (2014) [ | University of Chicago, NCI-NIH, Washington Radiology Associates, Genentech, USUHS, UCL, WRNMC, Westat Inc. | F | CC | 137 | 100 | x | x | x | x | x | ||
The Table describes the image data used in each study, including type of mammograms and dataset size, as well as methodological details for the computerized texture analysis, the technique of breast sampling, and algorithm implementation of texture features
IMPRS International Max Planck Research School for Optics and Imaging, IPOFG Instituto Português de Oncologia Francisco Gentil, LSHTM London School of Hygiene and Tropical Medicine, Moffitt Moffitt Cancer Center and Research Institute, NCI-NIH National Cancer Institute, National Institutes of Health, RadboudUMC Radboud University Nijmegen Medical Centre, TTUHS Texas Tech University Health Sciences, UCL University College London, UCLA University of California at Los Angeles, UNAM Universidad Nacional Autónoma de México, USUHS Uniformed Services University of the Health Sciences, WRNMC Walter Reed National Military Medical Center
Mammograms: F Digitized screen-film, D Full-field digital, CC cranio-caudal, MLO mediolateral-oblique; Dataset: A cancer cases (Pprior, unaffected, images, Cimages from the contralateral, unaffected, breast at the time of cancer diagnosis) or other high-risk population (i.e., BRCA1/2 carriers), B controls; Breast sampling: S1 retro-areolar region or the entire breast/dense tissue as a single region of interest (ROI), S2 multiple ROIs covering the entire breast; Types of texture features: T1 gray-level histogram, T2 co-occurrence, T3 run-length, T4 structural/pattern, T5 multi-resolution/spectral
Fig. 1Regions of interest (ROIs) used in texture analysis. a single ROIs selected in the retro-areolar breast area, b the entire breast and the largest rectangular box inscribed within the breast, studied as single ROIs, c multiple ROIs at multiple scales of density, and d multiple ROIs defined by a lattice covering the entire breast
Parenchymal texture descriptors for breast cancer risk assessment; texture descriptors which have been examined in association with breast cancer risk, classified to five feature groups
| Grey-level histogram features [ | |||
| min intensity | skewness | 5th percentile | energy |
| max intensity | kurtosis | 5th percentile mean | root mean square variation |
| standard deviation | entropy | 95th percentile | |
| mean intensity | sum intensity | 95th percentile mean | |
| Co-occurrence features [ | |||
| cluster shade | entropy | inverse difference moment | difference entropy |
| correlation | inertia | sum variance | homogeneity |
| Haralick correlation | difference moment | sum average | product moment |
| energy | coarseness | difference variance | triangular symmetry |
| Run-length measures [ | |||
| long run emphasis | gray-level non-uniformity | high gray level run emphasis | run percentage |
| short run emphasis | run-length non-uniformity | low gray level run emphasis | number of runs |
| Structural/Pattern measures [ | |||
| fractal dimension | local binary pattern | Hessian matrix | Weber local descriptors |
| lacunarity | Law’s masks | edge enhancing index | directional gradient |
| Multi-resolution/Spectral features [ | |||
| Fourier power spectrum | wavelet/Gabor | Gaussian Kernels | power-law spectrum |
Fig. 2Characterization of parenchymal patterns using computerized texture analysis. Examples of feature maps showing the distribution of texture values in the breast, generated by the application of the lattice-based strategy of Zheng et al. [51] to an MLO-view full-field digital mammogram. (a) Grey-level histogram, (b) Co-occurrence, (c) Run-length, (d) Structural, and (e) Multi-resolution
Breast cancer prediction capacity of automated characterization of the parenchymal patterns
| Study | Dataset | Model | Discriminatory capacity (AUC) | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Year | Participating Institutions | A | B | m | $Texture | $PD | $Texture + PD | ^Texture | ^PD | ^Texture + PD | |
| Distinguishing between cancer cases and healthy women | |||||||||||
| Wu et al. (2008) [ | University of Michigan | 128C | 549 | No | LDACV | 0.73 | |||||
| Manduca et al. (2009) [ | Mayo Clinic, Moffitt | 246P | 522 | Yes | LRCV | [0.58, 0.60] | 0.58 | Age, BMI | |||
| [0.61, 0.62] | 0.60 | [0.62, 0.63] | |||||||||
| Wei et al. (2011) [ | University of Michigan | 136C | 246 | No | LDA | 0.74* | 0.61 | 0.76 | Age, BMI, family history of breast cancer, #of previous breast biopsies | ||
| 0.78 | |||||||||||
| Nielsen et al. (2011) [ | University of Copenhagen, Nordic Bioscience, Delft University of Technology, RadboudUMC, Mayo Clinic | 245P | 250 | No | LRCV | 0.63 | 0.60 | 0.66* | |||
| Brandt et al. (2011) [ | University of Copenhagen, RadboudUMC, Synarc Imaging Technologies | 245P | 245 | Yes | kNNCV | 0.63 | 0.56 | ||||
| Häberle et al. (2012) [ | Erlangen University Hospital, Fraunhofer Institute for Integrated Circuits IIS, IMPRS, UCLA | 864C | 418 | Yes | LRCV | 0.75 | 0.51 | 0.75 | Age, BMI, family history of breast cancer, parity, age at first term pregnancy | ||
| 0.79 | 0.66 | 0.79 | |||||||||
| Li et al. (2012) [ | University of Chicago | 75C | 328 | No | BANNCV | 0.73 | |||||
| Li et al. (2012) [ | University of Chicago | 67C | 268 | Yes | BANNCV | 0.70 | |||||
| Chen et al. (2014) [ | University of Manchester | 50C | 50 | No | LR | 0.71 | 0.62 | 0.68 | |||
| Nielsen et al. (2014) [ | UCPH, Nordic Bioscience, Biomediq, RadboudUMC, Mayo Clinic | 245P | 250 | No | LRCV | Age, BMI, menopause, hormonal use | |||||
| 0.60 | 0.63 | 0.66 | |||||||||
| Nielsen et al. (2014) [ | UCPH, Nordic Bioscience, Biomediq, RadboudUMC, Mayo Clinic | 226C | 442 | Yes | LRCV | Age, BMI, menopause, hormonal use | |||||
| 0.61 | 0.63 | ||||||||||
| Li et al. (2014) [ | University of Chicago | 67C | 268 | Yes | BANNCV | 0.70* | 0.57 | 0.68 | |||
| Karemore et al. (2014) [ | UCPH, RadboudUMC | 245P | 250 | Yes | kNNCV | 0.59 | |||||
| Zheng et al. (2015) [ | University of Pennsylvania | 106C | 318 | Yes | LRCV | 0.85* | 0.59 | 0.86 | |||
| Sun et al. (2015) [ | University of Texas, China Northeastern University, University of Oklahoma, TTUHS, Guiyang Medical University | 141P | 199 | No | SVMCV | 0.73 | Age, BMI, family history of breast cancer, hormonal use, age at first term pregnancy | ||||
| 0.77 | |||||||||||
| Tan et al. (2015) [ | University of Texas, University of Oklahoma, University of Pittsburgh | ANNCV | age | ||||||||
| 812P | 1084 | No | 0.71 | 0.78 | |||||||
| Tan et al. (2015) [ | University of Oklahoma, University of Pittsburgh | 430P | 440 | No | ANNCV | [0.64, 0.73] | |||||
| Predicting the risk of carrying a high-risk genetic mutation | |||||||||||
| Huo et al. (2000) [ | University of Chicago | 15 | 143 | No | LDA | [0.59, 0.82] | |||||
| Huo et al. (2000) [ | University of Chicago | 15 | 30 | Yes | LDA | [0.53, 0.87] | |||||
| Huo et al. (2002) [ | University of Chicago, University of Pennsylvania | 30 | 142 | No | LDA | 0.91 | |||||
| Huo et al. (2002) [ | University of Chicago, University of Pennsylvania | 30 | 60 | Yes | LDA | 0.92 | |||||
| Li et al. (2004) [ | University of Chicago, University of Pennsylvania | 30 | 60 | Yes | LDACV | [0.69, 0.92] | |||||
| Li et al. (2005) [ | University of Chicago | 30 | 142 | No | ROCA | [0.66, 0.86] | |||||
| Li et al. (2005) [ | University of Chicago | 30 | 60 | Yes | ROCA | [0.67, 0.86] | |||||
| Li et al. (2007) [ | University of Chicago | 30 | 142 | No | ROCACV | [0.74, 0.93] | |||||
| Li et al. (2007) [ | University of Chicago | 30 | 60 | Yes | ROCACV | [0.77, 0.91] | |||||
| Li et al. (2008) [ | University of Chicago | 30 | 142 | No | ROCA | 0.90 | |||||
| Li et al. (2008) [ | University of Chicago | 30 | 60 | Yes | ROCA | 0.89 | |||||
| Li et al. (2012) [ | University of Chicago | 53 | 328 | No | BANNCV | 0.82 | |||||
| Li et al. (2012) [ | University of Chicago | 34 | 136 | Yes | BANNCV | 0.81 | |||||
| Li et al. (2014) [ | University of Chicago | 34 | 136 | Yes | BANNCV | 0.81* | 0.53 | 0.81 | |||
| Gierach et al. (2014) [ | University of Chicago | 137 | 100 | No | BANNCV | 0.68 | 0.59 | 0.72 | |||
| Gierach et al. (2014) [ | University of Chicago, NCI-NIH, Washington Radiology Associates, Genentech, USUHS, UCL, WRNMC, Westat Inc. | 126 | 89 | Yes | BANNCV | 0.71 | 0.55 | 0.72 | |||
Area under the ROC curve (AUC) achieved by risk assessment models when fed with mammographic texture and/or density measures
IMPRS International Max Planck Research School for Optics and Imaging, Moffitt Moffitt Cancer Center and Research Institute, NCI-NIH National Cancer Institute, National Institutes of Health, RadboudUMC Radboud University Nijmegen Medical Centre, TTUHS Texas Tech University Health Sciences, UCL University College London, UCLA University of California at Los Angeles, USUHS Uniformed Services University of the Health Sciences, WRNMC Walter Reed National Military Medical Center
Dataset: A cancer cases (Pprior unaffected images, Cimages from the contralateral, unaffected, breast at the time of cancer diagnosis) or other high-risk population (i.e., BRCA1/2 carriers), B controls, m matched subgroups; Model: LDA Linear Discriminant Analysis, LR Logistic Regression, kNN k-nearest neighbors, BANN Bayesian Artificial Neural Network, ANN Artificial Neural Network, ROCA Receiver Operating Characteristic Analysis. PD percent density. CVcross-validated models; $unadjusted models; ^models adjusted for established risk factors; *statistically significant from $PD at < 0.05