| Literature DB >> 26168051 |
Carole Lunny1, Darlene Taylor2, Linda Hoang3, Tom Wong4, Mark Gilbert2, Richard Lester2, Mel Krajden3, Gina Ogilvie2.
Abstract
BACKGROUND: The increases in STI rates since the late 1990s in Canada have occurred despite widespread primary care and targeted public health programs and in the setting of universal health care. More innovative interventions are required that would eliminate barriers to STI testing such as internet-based or mail-in home and community service testing for patients that are hard to reach, who refuse to go for clinician-based testing, or who decline an examination. Jurisdictions such as New Zealand and some American states currently use self-collected sampling, but without the required evidence to determine whether self-collected specimens are as accurate as clinician-collected specimens in terms of chlamydia and gonorrhea diagnostic accuracy. The objective of the review is to compare self-collected vaginal, urine, pharyngeal and rectal samples to our reference standard - clinician-collected cervical, urethral, pharyngeal and rectal sampling techniques to identify a positive specimen using nucleic acid amplification test assays.Entities:
Mesh:
Year: 2015 PMID: 26168051 PMCID: PMC4500554 DOI: 10.1371/journal.pone.0132776
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Characteristics of studies comparing the accuracy of self-collected compared to clinician-collected samples (n = 21).
| Disease | Sample Collection | Sensitivity | Specificity | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Study, year published | Location | Total participants analyzed | Setting of self-collected specimen | Sex (n) | Age in years (mean or range) | Prevalence | Study Design | QUADAS score(max 12) | Device (self-collection/ clinician collection | Specimen (clinician vs self) | NAAT platform | Specific assay(single or combo) | |||
|
| Beck-Sague et al. 1998 | Atlanta, USA | 415 | Clinic | F | 17 | 26.6% | Cross-sectional | 10 | Swab/ Cup | Cervix/ urine | PCR | Amplicor(single) | 0.90 [0.81, 0.95] | 1.00 [0.99, 1.00] |
| Berwald et al. 2009 | New York, USA | 162 | Clinic | F | 32 | 6.8% | Cross-sectional | 10 | Swab | Cervix/ vaginal | PCR | Amplicor(single) | 0.91 [0.59, 1.00] | 0.99 [0.95, 1.00] | |
| Domeika et al. 1999 | Vilnius, Lithuania | 283 | Clinic | F | 18–35 | 9.8% | Cross-sectional | 11 | Swab | Cervix/ vaginal | PCR | Amplicor(singe) | 0.80 [0.56, 0.94] | 0.98 [0.96, 1.00] | |
| Freeman et al. 2011 | San Francisco, USA | 480 | Clinic | M | . | 1.3% | Cross-sectional | 10 | Swab | Pharyngeal/ pharyngeal | TMA | AC2(combo) | 0.83 [0.36, 1.00] | 1.00 [0.98, 1.00] | |
| Haugland et al. 2010 | Bergen, Norway | 603 | Clinic | F | 15–34 | 11.8% | Cross-sectional | 12 | Swab/ Cup | Cervix/ urine | SDA | ProbeTec(single) | 0.86 [0.76, 0.93] | 0.97 [0.95, 0.98] | |
| Higgins et al. 1998 | Manchester, UK | 378 | Clinic | M | . | 13.8% | Cross-sectional | 11 | Swab/ Cup | Urethra/ urine | PCR | Amplicor-Cobas(combo) | 0.89 [0.77, 0.96] | 0.99 [0.97, 1.00] | |
| Hook et al. 1997 | Alabama, USA | 309 | Clinic | F | . | 12.6% | Cross-sectional | 11 | Swab | Cervix/ vaginal | PCR | LCx(single) | 0.91 [0.78, 0.97] | 0.98 [0.95, 0.99] | |
| Keane et al. 2007 | Cornwall, UK | 333 | Clinic | F | 16–25 | 15.9% | Cross-sectional | 12 | Other | Cervix/ vaginal | PCR | Amplicor-Cobas.(combo) | 0.96 [0.87, 1.00] | 0.98 [0.96, 0.99] | |
| Puolakkainen et al. 1998 | Helsinki, Finland | 1015 | Clinic | 449 (F); 565 (M) | . | 4.2% (F); 7.4% (M) | Cross-sectional | 8 | Swab/ Cup | Urethra/ urine | PCR | Amplicor-Cobas(combo) | UU: 0.89 [0.77, 0.96] | UU: 0.99 [0.97, 1.00] | |
| Quinn et al. 1996 | Baltimore, USA | 525 | Clinic | F | 24 | 9.6% | RCT | 11 | Swab/ Cup | Cervix/ urine | PCR | Amplicor(single) | 0.85 [0.70, 0.94] | 0.98 [0.95, 0.99] | |
| Roberts et al. 2011 | Dallas, USA | 2018 | Clinic | F | 26.9 | 4.3% | Cross-sectional | 10 | Swab/ Cup | Cervix/ urine | TMA | AC2(combo) | 0.97 [0.90, 0.99] | 1.00 [1.00, 1.00] | |
| Schachter et al. 2005 | Multi-centre, USA | 1464 | Clinic | F | 26.1 | 13.4% | Cross-sectional | 10 | Swab/ Cup | Cervix/ urine | PCR | AC2(combo) | 0.81 [0.75, 0.86] | 0.99 [0.98, 0.99] | |
| Skidmore et al. 2008 | Telford, UK | 240 | Clinic | F | 21 | 10.4% | Cross-sectional | 9 | Swab | Cervix/ vaginal | PCR | Cobas taqman 48(single) | 1.00 [0.85, 1.00] | 1.00 [0.98, 1.00] | |
| Stary et al. 1997a | Vienna, Austria | 312 | Clinic | F | . | 8.3% | Cross-sectional | 11 | Swab/ Cup | Cervix/ urine | LCR | LCx(single) | 0.92 [0.73, 0.99] | 0.99 [0.98, 1.00] | |
| Stary et al. 1998 | Vienna, Austria | 240 | Clinic | 308 (F); 240 (M) | NR | 7.5% (F); 17.1% (M) | Cross-sectional | 10 | Swab/ Cup | Cervix/ urine; Urethra/ urine | LCR | LCx(single) | CU: 0.92 [0.73, 0.99]; UU: 0.83 [0,69, 0.93] | CU: 0.99 [0.97, 1.00]; UU: 0.98 [0.95, 0.99] | |
| Sugunendran et al. 2001 | Liverpool, UK | 61 | Clinic | M | 26 | 33.7% | Cross-sectional | 10 | Swab/ Cup | Urethra/ urine | PCR | Amplicor-Cobas(combo) | 0.94 [0.71, 1.00] | 0.80 [0.65, 0.90] | |
| Tabrizi et al. 1997 | Tiwi, Australia | 509 | Clinic | F | . | 3% | Cross-sectional | 10 | Tampon | Cervix/ vaginal | PCR | Pace-2(single) | 0.93 [0.68, 1.00] | 0.97 [0.95, 0.99] | |
| Toye et al. 1996 | Ottawa, Canada | 379 | Clinic | M | 27 | 4.0% | Cross-sectional | 12 | Swab/ Cup | Urethra/ urine | PCR | Amplicor(single) | 0.87 [0.74, 0.94] | 1.00 [0.99, 1.00] | |
| van der Helm et al. 2009 | Amsterdam, Netherlands | 2100 | Clinic | 900 (F); 1200 (M) | 31.5 | 9.4% (F); 10.8% (M) | Cross-sectional | 12 | Swab | Rectal/ rectal | PCR | Amplicor-Cobas(combo) | F: 0.88 [0.79, 0.94]; M: 0.88 [0.81, 0.92]; | F: 0.99 [0.98, 0.99]; M: 0.99 [0.98, 0.99] | |
| van Doornum et al. 2001 | Rotterdam, Netherlands | 1001 | Clinic | 503 (F); 498 (M) | <30 | 12.1% (F); 9.4% (M) | Cross-sectional | 10 | Swab/ Cup | Cervix/ urine; Urethra/ urine | PCR | Amplicor-Cobas(combo) | CU: 0.78 [0.67, 0.88]; UU: 0.87 [0.74, 0.94] | CU: 1.00 [0.98, 1.00]; UU: 1.00 [0.99, 1.00] | |
|
| Freeman et al. 2011 | San Francisco, USA | 480 | Clinic | M | . | 7.2% | Cross-sectional | 10 | Swab | Pharyngeal/ pharyngeal | TMA | AC2(combo) | 0.91 [0.75, 0.98] | 0.97 [0.95, 0.98] |
| Higgins et al. 1998 | Manchester, UK | 378 | Clinic | M | . | 8.7% | Cross-sectional | 11 | Swab/ Cup | Urethra/ urine | PCR | Amplicor-Cobas(combo) | 0.94 [0.80, 0.99] | 0.99 [0.98, 1.00] | |
| Hook et al. 1997 | Alabama, USA | 309 | Clinic | F | . | 14.2% | Cross-sectional | 11 | Swab | Cervix/ vaginal | PCR | LCx(single) | 0.98 [0.88, 1.00] | 0.97 [0.94, 0.99] | |
| Schachter et al. 2005 | Multi-centre, USA | 1464 | Clinic | F | 26.1 | 5.5% | Cross-sectional | 10 | Swab/ Cup | Cervix/ urine | PCR | AC2(combo) | 0.88 [0.78, 0.94] | 1.00 [0.99, 1.00] | |
| Stary et al. 1997b | Vienna, Austria | 325 | Clinic | 125 (F); 200 M | . | 15.2% (F); 24.5% (M) | Cross-sectional | 12 | Swab/ Cup | Cervix/ urine; Urethra/ urine | LCR | LCx(single) | CU: 0.89 [0.65, 0.9]; UU (F): 1.00 [0.79, 1.00] | CU: 0.98 [0.93, 1.00]; UU (F): 0.98 [0.94, 1.00] | |
| van der Helm et al. 2009 | Amsterdam, Netherlands | 2100 | Clinic | 900 (F); 1200 (M) | 31.5 | 1.9% (F); 6.9% (M) | Cross-sectional | 12 | Swab | Rectal/ rectal | PCR | Amplicor-Cobas (combo) | F: 0.85 [0.55, 0.98]; M: 0.88 [0.78, 0.95] | F: 1.00 [0.99, 1.00]; M: 0.98 [0.97, 0.99] | |
| van Doornum et al. 2001 | Rotterdam, Netherlands | 1001 | Clinic | 503 (F); 498 (M) | <30 | 1.2% (F); 4.2% (M) | Cross-sectional | 10 | Swab/ Cup | Cervix/ urine; Urethra/ urine | PCR | Amplicor-Cobas(combo) | CU: 0.32 [0.13, 0.57]; UU: 0.84 [0.64, 0.95] | CU: 0.99 [0.98, 1.00]; UU: 1.00 [0.98, 1.00] | |
Note. F = Female; M = Male; CC = Cervix/ urine; UU = Urethra/ urine.
Fig 1PRISMA flowchart of identification and selection of studies.
Pooled effect size of chlamydia studies using a HSROC random effects model (for sub-groups of 4 studies or more).
| Self-collected sample/clinician collected sample | Subgroup | Included studies (n) | Sample size (n) | Sensitivity (95% CI) | Specificity (95% CI) |
|---|---|---|---|---|---|
| Urine/Urethra in men | All | 6 | 2133 | 0.88 (0.83–0.93) | 0.99 (0.94–0.99) |
| Combo assay | 4 | 1833 | 0.90 (0.84–0.94) | 0.99 (0.89–1.00) | |
| Prevalence (<14%) | 5 | 1583 | 0.89 (0.82–0.93) | 0.99 (0.98–1.00) | |
| Quadas score (10≥) | 5 | 1583 | 0.88 (0.81–0.92) | 0.98 (0.93–0.99) | |
| Urine/Cervix in women | All | 8 | 6182 | 0.87 (0.81–0.91) | 0.99 (0.98–1.00) |
| Single assay | 6 | 4240 | 0.90 (0.85–0.94) | 0.99 (0.98–1.00) | |
| Prevalence (11%-12%) | 4 | 2853 | 0.82 (0.78–0.86) | 0.99 (0.98–0.99) | |
| Quadas score (10≥) | 4 | 1638 | 0.88 (0.81–0.93) | 0.98 (0.97–0.99) | |
| Large to medium sample sizes (500>) | 4 | 4563 | 0.87 (0.76–0.93) | 0.99 (0.97–1.00) | |
| Vaginal/Cervix in women | All | 6 | 1806 | 0.92 (0.87–0.95) | 0.98 (0.97–0.99) |
| Single assay | 4 | 1311 | 0.90 (0.83–0.95) | 0.98 (0.97–0.99) | |
| Device (= swab) | 4 | 400 | 0.89 (0.82–0.94) | 0.98 (0.97–0.99) |
Fig 2HSROC plots of chlamydia self-collection compared to clinician-collection (top row) and HSROC plots of chlamydia self-sampling by assay type (bottom row).
Top row: The circles represent individual studies and size of the circle is proportional to the number of patients included in the study. The red square is the summary estimate of sensitivity and specificity, and the red dotted ellipse around the spots respresents the 95% confidence interval around the summary estimate. The green dotted ellipse around the spots represents the prediction contours outlining the prediction region for the true sensitivity and specificity in a future study. Bottom row: Coloured lines represent the HSROC curve by assay type in Chlamydia studies.
Fig 3Forest plot of the accuracy of chlamydia self-collection compared to clinician collection.
Fig 4Forest plot of gonorrhea self-sampling compared to clinician sampling.
Fig 5Fixed effects sROC plots of gonorrhea studies comparing self-collected urine to either clinician-collected urethra (left) or cervical (right) samples by PCR assay type.
Colored lines represent the sROC curve by assay type.