| Literature DB >> 21582397 |
Tuncer Hökelek, Hakan Dal, Barış Tercan, F Elif Ozbek, Hacali Necefoğlu.
Abstract
The title Ni(II) complex, [Ni(C(7)H(4)ClO(2))(2)(C(6)H(6)N(2)O)(2)(H(2)O)(2)], is centrosymmetric with the Ni atom located on an inversion centre. The mol-ecule contains two 2-chloro-benzoate (CB) and two nicotinamide (NA) ligands and two water mol-ecules, all ligands being monodentate. The four O atoms in the equatorial plane around the Ni atom form a slightly distorted square-planar arrangement, while the slightly distorted octa-hedral coordination is completed by the two N atoms of the NA ligands in the axial positions. The dihedral angle between the carboxyl group and the adjacent benzene ring is 29.48 (16)°, while the pyridine and benzene rings are oriented at a dihedral angle of 83.16 (5)°. In the crystal structure, O-H⋯O and N-H⋯O hydrogen bonds link the mol-ecules into infinite chains. π-π Contacts between the benzene and pyridine rings [centroid-centroid distance = 3.952 (1) Å] may further stabilize the crystal structure. There is also a C-H⋯π inter-action.Entities:
Year: 2009 PMID: 21582397 PMCID: PMC2968958 DOI: 10.1107/S1600536809011209
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Ni(C7H4ClO2)2(C6H6N2O)2(H2O)2] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 5500 reflections |
| θ = 2.4–28.3° | |
| µ = 0.99 mm−1 | |
| β = 106.600 (2)° | Block, orange |
| 0.45 × 0.30 × 0.25 mm | |
| Bruker Kappa-APEXII CCD area-detector diffractometer | 3301 independent reflections |
| Radiation source: fine-focus sealed tube | 2626 reflections with |
| graphite | |
| φ and ω scans | θmax = 28.3°, θmin = 2.3° |
| Absorption correction: multi-scan ( | |
| 11754 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3301 reflections | (Δ/σ)max < 0.001 |
| 202 parameters | Δρmax = 0.77 e Å−3 |
| 1 restraint | Δρmin = −0.69 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Ni1 | 0.5000 | 0.0000 | 0.0000 | 0.01322 (13) | |
| Cl1 | 0.40816 (8) | 0.28820 (3) | −0.32584 (6) | 0.02186 (16) | |
| O1 | 0.6153 (2) | 0.09893 (9) | −0.04613 (15) | 0.0135 (3) | |
| O2 | 0.3868 (2) | 0.13652 (10) | −0.22542 (16) | 0.0155 (4) | |
| O3 | 0.0484 (2) | 0.00967 (10) | 0.32471 (17) | 0.0183 (4) | |
| O4 | 0.2363 (2) | 0.04330 (10) | −0.08886 (17) | 0.0146 (4) | |
| H41 | 0.261 (4) | 0.0763 (19) | −0.141 (3) | 0.030 (9)* | |
| H42 | 0.153 (3) | 0.0172 (16) | −0.141 (3) | 0.029* | |
| N1 | 0.4964 (3) | 0.04416 (10) | 0.19906 (19) | 0.0115 (4) | |
| N2 | 0.1426 (3) | 0.08165 (13) | 0.5195 (2) | 0.0188 (5) | |
| H21 | 0.221 (4) | 0.1030 (18) | 0.573 (3) | 0.026 (9)* | |
| H22 | 0.060 (4) | 0.0657 (17) | 0.550 (3) | 0.023 (8)* | |
| C1 | 0.5480 (3) | 0.13795 (13) | −0.1555 (2) | 0.0121 (4) | |
| C2 | 0.6718 (3) | 0.18573 (13) | −0.2104 (2) | 0.0124 (5) | |
| C3 | 0.8477 (3) | 0.16293 (13) | −0.1863 (2) | 0.0143 (5) | |
| H3 | 0.8887 | 0.1224 | −0.1271 | 0.017* | |
| C4 | 0.9630 (3) | 0.19869 (14) | −0.2478 (2) | 0.0164 (5) | |
| H4 | 1.0797 | 0.1824 | −0.2294 | 0.020* | |
| C5 | 0.9033 (3) | 0.25927 (14) | −0.3375 (2) | 0.0166 (5) | |
| H5 | 0.9789 | 0.2823 | −0.3820 | 0.020* | |
| C6 | 0.7319 (3) | 0.28498 (14) | −0.3601 (2) | 0.0154 (5) | |
| H6 | 0.6926 | 0.3262 | −0.4179 | 0.019* | |
| C7 | 0.6181 (3) | 0.24896 (13) | −0.2959 (2) | 0.0129 (5) | |
| C8 | 0.6344 (3) | 0.08184 (13) | 0.2847 (2) | 0.0132 (5) | |
| H8 | 0.7379 | 0.0868 | 0.2577 | 0.016* | |
| C9 | 0.6273 (3) | 0.11327 (14) | 0.4113 (2) | 0.0169 (5) | |
| H9 | 0.7240 | 0.1393 | 0.4678 | 0.020* | |
| C10 | 0.4743 (3) | 0.10541 (13) | 0.4526 (2) | 0.0152 (5) | |
| H10 | 0.4668 | 0.1262 | 0.5372 | 0.018* | |
| C11 | 0.3318 (3) | 0.06602 (13) | 0.3664 (2) | 0.0123 (4) | |
| C12 | 0.3496 (3) | 0.03681 (13) | 0.2405 (2) | 0.0125 (5) | |
| H12 | 0.2543 | 0.0108 | 0.1819 | 0.015* | |
| C13 | 0.1630 (3) | 0.05107 (13) | 0.4022 (2) | 0.0142 (5) |
| Ni1 | 0.0129 (2) | 0.0162 (2) | 0.00877 (19) | −0.00046 (17) | 0.00017 (15) | −0.00017 (15) |
| Cl1 | 0.0173 (3) | 0.0200 (3) | 0.0261 (3) | 0.0068 (2) | 0.0027 (2) | 0.0055 (2) |
| O1 | 0.0147 (8) | 0.0153 (8) | 0.0076 (7) | −0.0023 (6) | −0.0017 (6) | 0.0006 (6) |
| O2 | 0.0117 (8) | 0.0213 (9) | 0.0109 (7) | −0.0014 (7) | −0.0013 (6) | 0.0023 (6) |
| O3 | 0.0149 (9) | 0.0267 (10) | 0.0116 (7) | −0.0053 (7) | 0.0013 (6) | −0.0039 (7) |
| O4 | 0.0134 (9) | 0.0176 (9) | 0.0103 (7) | −0.0009 (7) | −0.0006 (6) | 0.0013 (6) |
| N1 | 0.0115 (9) | 0.0122 (10) | 0.0090 (8) | 0.0000 (7) | −0.0002 (7) | 0.0004 (7) |
| N2 | 0.0157 (11) | 0.0294 (13) | 0.0116 (9) | −0.0060 (9) | 0.0043 (8) | −0.0067 (9) |
| C1 | 0.0148 (11) | 0.0124 (11) | 0.0082 (9) | −0.0007 (9) | 0.0018 (8) | −0.0030 (8) |
| C2 | 0.0154 (11) | 0.0129 (11) | 0.0072 (9) | −0.0011 (9) | 0.0004 (8) | −0.0023 (8) |
| C3 | 0.0147 (11) | 0.0137 (11) | 0.0112 (10) | −0.0007 (9) | −0.0016 (8) | −0.0014 (8) |
| C4 | 0.0133 (11) | 0.0187 (12) | 0.0157 (11) | −0.0020 (9) | 0.0016 (9) | −0.0026 (9) |
| C5 | 0.0190 (12) | 0.0174 (12) | 0.0127 (10) | −0.0053 (10) | 0.0035 (9) | −0.0016 (9) |
| C6 | 0.0189 (12) | 0.0145 (12) | 0.0099 (10) | −0.0022 (9) | −0.0007 (8) | 0.0008 (8) |
| C7 | 0.0126 (11) | 0.0140 (11) | 0.0092 (10) | 0.0017 (9) | −0.0013 (8) | −0.0020 (8) |
| C8 | 0.0120 (11) | 0.0154 (12) | 0.0109 (10) | −0.0009 (9) | 0.0010 (8) | 0.0006 (8) |
| C9 | 0.0155 (12) | 0.0196 (13) | 0.0125 (10) | −0.0047 (10) | −0.0012 (9) | −0.0033 (9) |
| C10 | 0.0177 (12) | 0.0188 (12) | 0.0071 (9) | −0.0023 (9) | 0.0005 (8) | −0.0028 (8) |
| C11 | 0.0134 (11) | 0.0134 (11) | 0.0082 (9) | −0.0007 (9) | −0.0001 (8) | 0.0007 (8) |
| C12 | 0.0131 (11) | 0.0123 (11) | 0.0091 (9) | −0.0006 (9) | −0.0018 (8) | 0.0011 (8) |
| C13 | 0.0132 (11) | 0.0180 (12) | 0.0097 (9) | 0.0004 (9) | 0.0008 (8) | 0.0017 (8) |
| Ni1—O1i | 2.1017 (16) | C3—H3 | 0.9300 |
| Ni1—O1 | 2.1017 (16) | C4—C3 | 1.383 (3) |
| Ni1—O4 | 2.1520 (16) | C4—C5 | 1.395 (3) |
| Ni1—O4i | 2.1520 (16) | C4—H4 | 0.9300 |
| Ni1—N1i | 2.1217 (18) | C5—C6 | 1.381 (3) |
| Ni1—N1 | 2.1217 (18) | C5—H5 | 0.9300 |
| Cl1—C7 | 1.740 (2) | C6—H6 | 0.9300 |
| O1—C1 | 1.267 (3) | C7—C2 | 1.404 (3) |
| O2—C1 | 1.258 (3) | C7—C6 | 1.393 (3) |
| O3—C13 | 1.246 (3) | C8—C9 | 1.384 (3) |
| O4—H41 | 0.85 (3) | C8—H8 | 0.9300 |
| O4—H42 | 0.850 (18) | C9—H9 | 0.9300 |
| N1—C8 | 1.350 (3) | C10—C9 | 1.382 (3) |
| N1—C12 | 1.335 (3) | C10—H10 | 0.9300 |
| N2—C13 | 1.329 (3) | C11—C10 | 1.390 (3) |
| N2—H21 | 0.79 (3) | C11—C12 | 1.389 (3) |
| N2—H22 | 0.84 (3) | C11—C13 | 1.492 (3) |
| C1—C2 | 1.508 (3) | C12—H12 | 0.9300 |
| C2—C3 | 1.396 (3) | ||
| O1i—Ni1—O1 | 180.00 (5) | C4—C3—C2 | 122.0 (2) |
| O1i—Ni1—O4 | 88.18 (6) | C4—C3—H3 | 119.0 |
| O1—Ni1—O4 | 91.82 (6) | C3—C4—C5 | 119.7 (2) |
| O1i—Ni1—O4i | 91.82 (6) | C3—C4—H4 | 120.2 |
| O1—Ni1—O4i | 88.18 (6) | C5—C4—H4 | 120.2 |
| O4—Ni1—O4i | 180.00 (9) | C4—C5—H5 | 120.1 |
| O1i—Ni1—N1i | 90.24 (7) | C6—C5—C4 | 119.9 (2) |
| O1—Ni1—N1i | 89.76 (7) | C6—C5—H5 | 120.1 |
| O1i—Ni1—N1 | 89.76 (7) | C5—C6—C7 | 119.7 (2) |
| O1—Ni1—N1 | 90.24 (7) | C5—C6—H6 | 120.2 |
| N1i—Ni1—N1 | 180.00 (14) | C7—C6—H6 | 120.2 |
| N1i—Ni1—O4 | 91.44 (7) | C2—C7—Cl1 | 122.46 (19) |
| N1—Ni1—O4 | 88.56 (7) | C6—C7—Cl1 | 115.85 (18) |
| N1i—Ni1—O4i | 88.56 (7) | C6—C7—C2 | 121.7 (2) |
| N1—Ni1—O4i | 91.44 (7) | N1—C8—C9 | 122.3 (2) |
| Ni1—O4—H41 | 98 (2) | N1—C8—H8 | 118.8 |
| Ni1—O4—H42 | 122 (2) | C9—C8—H8 | 118.8 |
| H41—O4—H42 | 107 (3) | C8—C9—H9 | 120.5 |
| C1—O1—Ni1 | 123.37 (14) | C10—C9—C8 | 119.1 (2) |
| C8—N1—Ni1 | 122.93 (16) | C10—C9—H9 | 120.5 |
| C12—N1—Ni1 | 119.06 (14) | C9—C10—C11 | 119.3 (2) |
| C12—N1—C8 | 117.97 (19) | C9—C10—H10 | 120.4 |
| C13—N2—H21 | 121 (2) | C11—C10—H10 | 120.4 |
| C13—N2—H22 | 118 (2) | C10—C11—C13 | 124.3 (2) |
| H22—N2—H21 | 118 (3) | C12—C11—C10 | 117.9 (2) |
| O1—C1—C2 | 117.6 (2) | C12—C11—C13 | 117.80 (19) |
| O2—C1—O1 | 124.4 (2) | N1—C12—C11 | 123.4 (2) |
| O2—C1—C2 | 117.89 (19) | N1—C12—H12 | 118.3 |
| C3—C2—C1 | 118.8 (2) | C11—C12—H12 | 118.3 |
| C3—C2—C7 | 116.9 (2) | O3—C13—N2 | 122.2 (2) |
| C7—C2—C1 | 124.1 (2) | O3—C13—C11 | 119.9 (2) |
| C2—C3—H3 | 119.0 | N2—C13—C11 | 117.9 (2) |
| O4—Ni1—O1—C1 | −35.17 (18) | C1—C2—C3—C4 | 172.0 (2) |
| O4i—Ni1—O1—C1 | 144.83 (18) | C7—C2—C3—C4 | −2.5 (3) |
| N1i—Ni1—O1—C1 | 56.26 (18) | C5—C4—C3—C2 | −0.3 (3) |
| N1—Ni1—O1—C1 | −123.74 (18) | C3—C4—C5—C6 | 2.5 (3) |
| O1i—Ni1—N1—C8 | 136.61 (18) | C4—C5—C6—C7 | −1.7 (3) |
| O1—Ni1—N1—C8 | −43.39 (18) | Cl1—C7—C2—C1 | 10.4 (3) |
| O1i—Ni1—N1—C12 | −45.66 (17) | Cl1—C7—C2—C3 | −175.42 (16) |
| O1—Ni1—N1—C12 | 134.34 (17) | C6—C7—C2—C1 | −170.8 (2) |
| O4—Ni1—N1—C12 | 42.53 (17) | C6—C7—C2—C3 | 3.4 (3) |
| O4i—Ni1—N1—C12 | −137.47 (17) | Cl1—C7—C6—C5 | 177.53 (17) |
| O4—Ni1—N1—C8 | −135.20 (18) | C2—C7—C6—C5 | −1.3 (3) |
| O4i—Ni1—N1—C8 | 44.80 (18) | N1—C8—C9—C10 | 0.6 (4) |
| Ni1—O1—C1—O2 | 22.1 (3) | C11—C10—C9—C8 | 0.2 (4) |
| Ni1—O1—C1—C2 | −154.02 (15) | C12—C11—C10—C9 | −0.7 (3) |
| Ni1—N1—C8—C9 | 176.99 (17) | C13—C11—C10—C9 | 177.3 (2) |
| C12—N1—C8—C9 | −0.8 (3) | C10—C11—C12—N1 | 0.5 (3) |
| Ni1—N1—C12—C11 | −177.65 (17) | C13—C11—C12—N1 | −177.6 (2) |
| C8—N1—C12—C11 | 0.2 (3) | C10—C11—C13—O3 | −173.6 (2) |
| O1—C1—C2—C3 | 28.5 (3) | C10—C11—C13—N2 | 4.8 (4) |
| O1—C1—C2—C7 | −157.4 (2) | C12—C11—C13—O3 | 4.4 (3) |
| O2—C1—C2—C3 | −147.9 (2) | C12—C11—C13—N2 | −177.1 (2) |
| O2—C1—C2—C7 | 26.2 (3) |
| H··· | ||||
| O4—H41···O2 | 0.84 (4) | 1.82 (3) | 2.630 (2) | 161 (3) |
| O4—H42···O3ii | 0.85 (3) | 2.09 (3) | 2.887 (2) | 156 (3) |
| N2—H21···O2iii | 0.79 (3) | 2.13 (3) | 2.865 (3) | 156 (3) |
| N2—H22···O3iv | 0.84 (3) | 2.16 (3) | 2.934 (3) | 153 (3) |
| C9—H9···Cg1iii | 0.93 | 2.88 | 3.596 (2) | 135 |
Selected geometric parameters (Å, °)
| Ni1—O1 | 2.1017 (16) |
| Ni1—O4 | 2.1520 (16) |
| Ni1—N1 | 2.1217 (18) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O4—H41⋯O2 | 0.84 (4) | 1.82 (3) | 2.630 (2) | 161 (3) |
| O4—H42⋯O3ii | 0.85 (3) | 2.09 (3) | 2.887 (2) | 156 (3) |
| N2—H21⋯O2iii | 0.79 (3) | 2.13 (3) | 2.865 (3) | 156 (3) |
| N2—H22⋯O3iv | 0.84 (3) | 2.16 (3) | 2.934 (3) | 153 (3) |
| C9—H9⋯ | 0.93 | 2.88 | 3.596 (2) | 135 |
Symmetry codes: (ii) ; (iii) ; (iv) .