| Literature DB >> 21582339 |
Mustafa Sertçelik, Barış Tercan, Ertan Sahin, Hacali Necefoğlu, Tuncer Hökelek.
Abstract
In the crystal structure of the title Co(II) complex, [Co(C(8)H(5)O(3))(2)(C(10)H(14)N(2)O)(2)(H(2)O)(2)], the metal centre is located on an inversion center and is coordinated by two 4-formyl-benzoate (FOB), two diethyl-nicotinamide (DENA) ligands and two water mol-ecules in a slightly distorted CoO(4)N(2) octa-hedral geometry. In the crystal structure, O-H⋯O hydrogen bonds link the mol-ecules into infinite chains. π-π contacts between the parallel pyridine rings of neighboring DENA ligands [centroid-centroid distance = 3.652 (3) Å] further stabilize the crystal structure.Entities:
Year: 2009 PMID: 21582339 PMCID: PMC2968947 DOI: 10.1107/S1600536809008265
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Co(C8H5O3)2(C10H14N2O)2(H2O)2] | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 4172 reflections | |
| θ = 2.5–26.4° | |
| µ = 0.53 mm−1 | |
| α = 85.433 (2)° | |
| β = 78.608 (3)° | Prism, red |
| γ = 68.022 (2)° | 0.35 × 0.25 × 0.15 mm |
| Rigaku R-AXIS RAPID-S diffractometer | 3755 independent reflections |
| Radiation source: fine-focus sealed tube | 3016 reflections with |
| graphite | |
| ω scans | θmax = 26.4°, θmin = 2.5° |
| Absorption correction: multi-scan (Blessing, 1995) | |
| 19487 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3755 reflections | (Δ/σ)max < 0.001 |
| 246 parameters | Δρmax = 1.02 e Å−3 |
| 3 restraints | Δρmin = −0.33 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Co1 | 0.5000 | 0.0000 | 0.0000 | 0.0386 (3) | |
| O1 | 0.4778 (5) | −0.1144 (4) | −0.10591 (18) | 0.0473 (7) | |
| O2 | 0.7579 (5) | −0.1290 (4) | −0.1979 (2) | 0.0555 (8) | |
| O3 | 0.0578 (8) | −0.1907 (7) | −0.4559 (3) | 0.0958 (15) | |
| O4 | −0.2309 (5) | 0.3315 (4) | −0.1246 (2) | 0.0585 (9) | |
| O5 | 0.2256 (5) | −0.0208 (4) | 0.0630 (2) | 0.0506 (8) | |
| H51 | 0.224 (10) | −0.126 (4) | 0.080 (3) | 0.09 (2)* | |
| H52 | 0.214 (9) | 0.033 (5) | 0.113 (2) | 0.075 (18)* | |
| N1 | 0.3188 (5) | 0.2363 (4) | −0.0485 (2) | 0.0419 (8) | |
| N2 | −0.1116 (7) | 0.4197 (6) | −0.2512 (3) | 0.0609 (11) | |
| C1 | 0.5813 (6) | −0.1268 (5) | −0.1802 (3) | 0.0422 (9) | |
| C2 | 0.4825 (6) | −0.1361 (5) | −0.2530 (3) | 0.0418 (9) | |
| C3 | 0.5824 (7) | −0.1374 (6) | −0.3370 (3) | 0.0496 (11) | |
| H3 | 0.7097 | −0.1317 | −0.3480 | 0.060* | |
| C4 | 0.4938 (8) | −0.1471 (7) | −0.4037 (3) | 0.0570 (12) | |
| H4 | 0.5613 | −0.1474 | −0.4596 | 0.068* | |
| C5 | 0.3035 (8) | −0.1566 (6) | −0.3882 (3) | 0.0546 (11) | |
| C6 | 0.2016 (7) | −0.1530 (6) | −0.3045 (3) | 0.0510 (11) | |
| H6 | 0.0741 | −0.1583 | −0.2934 | 0.061* | |
| C7 | 0.2906 (7) | −0.1417 (6) | −0.2383 (3) | 0.0463 (10) | |
| H7 | 0.2213 | −0.1377 | −0.1824 | 0.056* | |
| C8 | 0.2121 (10) | −0.1698 (9) | −0.4608 (4) | 0.0750 (16) | |
| H81 | 0.294 (9) | −0.169 (7) | −0.522 (4) | 0.086 (19)* | |
| C9 | 0.3415 (6) | 0.3797 (5) | −0.0385 (3) | 0.0439 (10) | |
| H9 | 0.4366 | 0.3784 | −0.0070 | 0.053* | |
| C10 | 0.2310 (7) | 0.5285 (6) | −0.0724 (3) | 0.0494 (10) | |
| H10 | 0.2502 | 0.6255 | −0.0636 | 0.059* | |
| C11 | 0.0905 (7) | 0.5306 (5) | −0.1200 (3) | 0.0478 (10) | |
| H11 | 0.0157 | 0.6287 | −0.1449 | 0.057* | |
| C12 | 0.0637 (6) | 0.3839 (5) | −0.1299 (3) | 0.0426 (9) | |
| C13 | 0.1798 (6) | 0.2402 (5) | −0.0936 (3) | 0.0419 (9) | |
| H13 | 0.1613 | 0.1421 | −0.1005 | 0.050* | |
| C14 | −0.1028 (7) | 0.3743 (6) | −0.1700 (3) | 0.0468 (10) | |
| C15 | 0.0391 (10) | 0.4689 (8) | −0.3107 (3) | 0.0732 (16) | |
| H15A | 0.1301 | 0.4851 | −0.2785 | 0.088* | |
| H15B | −0.0288 | 0.5745 | −0.3370 | 0.088* | |
| C16 | 0.1577 (13) | 0.3470 (13) | −0.3789 (6) | 0.136 (4) | |
| H16A | 0.2601 | 0.3820 | −0.4123 | 0.203* | |
| H16B | 0.0709 | 0.3392 | −0.4151 | 0.203* | |
| H16C | 0.2193 | 0.2404 | −0.3536 | 0.203* | |
| C17 | −0.2911 (10) | 0.4212 (8) | −0.2844 (4) | 0.0754 (16) | |
| H17A | −0.4114 | 0.4706 | −0.2420 | 0.090* | |
| H17B | −0.3049 | 0.4888 | −0.3359 | 0.090* | |
| C18 | −0.2719 (12) | 0.2533 (8) | −0.3035 (5) | 0.097 (2) | |
| H18A | −0.3828 | 0.2589 | −0.3290 | 0.146* | |
| H18B | −0.2721 | 0.1894 | −0.2515 | 0.146* | |
| H18C | −0.1483 | 0.2014 | −0.3424 | 0.146* |
| Co1 | 0.0376 (5) | 0.0409 (5) | 0.0385 (5) | −0.0145 (3) | −0.0104 (3) | 0.0022 (3) |
| O1 | 0.0497 (17) | 0.0557 (18) | 0.0396 (16) | −0.0214 (15) | −0.0118 (13) | 0.0004 (13) |
| O2 | 0.0445 (18) | 0.069 (2) | 0.0525 (18) | −0.0191 (16) | −0.0098 (14) | −0.0061 (16) |
| O3 | 0.100 (3) | 0.148 (5) | 0.068 (3) | −0.070 (3) | −0.032 (2) | 0.002 (3) |
| O4 | 0.0547 (19) | 0.070 (2) | 0.062 (2) | −0.0353 (18) | −0.0136 (16) | 0.0081 (17) |
| O5 | 0.0472 (18) | 0.059 (2) | 0.0508 (18) | −0.0255 (16) | −0.0102 (14) | 0.0031 (15) |
| N1 | 0.0381 (18) | 0.0404 (19) | 0.049 (2) | −0.0148 (15) | −0.0127 (15) | 0.0019 (15) |
| N2 | 0.065 (3) | 0.077 (3) | 0.054 (2) | −0.036 (2) | −0.023 (2) | 0.010 (2) |
| C1 | 0.043 (2) | 0.038 (2) | 0.044 (2) | −0.0119 (18) | −0.0106 (18) | −0.0002 (17) |
| C2 | 0.044 (2) | 0.039 (2) | 0.041 (2) | −0.0131 (18) | −0.0086 (17) | 0.0002 (17) |
| C3 | 0.044 (2) | 0.055 (3) | 0.049 (2) | −0.018 (2) | −0.0040 (19) | −0.001 (2) |
| C4 | 0.065 (3) | 0.071 (3) | 0.037 (2) | −0.028 (3) | −0.006 (2) | −0.001 (2) |
| C5 | 0.061 (3) | 0.062 (3) | 0.045 (2) | −0.026 (2) | −0.014 (2) | 0.000 (2) |
| C6 | 0.049 (3) | 0.061 (3) | 0.048 (3) | −0.025 (2) | −0.012 (2) | 0.001 (2) |
| C7 | 0.047 (2) | 0.050 (2) | 0.041 (2) | −0.020 (2) | −0.0047 (18) | 0.0025 (18) |
| C8 | 0.083 (4) | 0.106 (5) | 0.050 (3) | −0.046 (4) | −0.017 (3) | −0.003 (3) |
| C9 | 0.041 (2) | 0.047 (2) | 0.048 (2) | −0.0174 (19) | −0.0145 (18) | 0.0010 (18) |
| C10 | 0.054 (3) | 0.044 (2) | 0.056 (3) | −0.023 (2) | −0.013 (2) | 0.003 (2) |
| C11 | 0.049 (2) | 0.041 (2) | 0.051 (3) | −0.016 (2) | −0.011 (2) | 0.0079 (19) |
| C12 | 0.041 (2) | 0.049 (2) | 0.038 (2) | −0.0166 (19) | −0.0089 (17) | 0.0038 (18) |
| C13 | 0.042 (2) | 0.041 (2) | 0.044 (2) | −0.0156 (18) | −0.0107 (17) | 0.0020 (17) |
| C14 | 0.044 (2) | 0.049 (3) | 0.049 (2) | −0.018 (2) | −0.0126 (19) | 0.0054 (19) |
| C15 | 0.087 (4) | 0.084 (4) | 0.057 (3) | −0.040 (3) | −0.015 (3) | 0.005 (3) |
| C16 | 0.109 (6) | 0.178 (9) | 0.122 (7) | −0.066 (7) | 0.029 (5) | −0.069 (7) |
| C17 | 0.082 (4) | 0.075 (4) | 0.080 (4) | −0.032 (3) | −0.040 (3) | 0.017 (3) |
| C18 | 0.134 (7) | 0.086 (5) | 0.088 (5) | −0.046 (5) | −0.049 (5) | −0.001 (4) |
| Co1—O1 | 2.088 (3) | C7—C6 | 1.370 (6) |
| Co1—O1i | 2.088 (3) | C7—H7 | 0.9300 |
| Co1—O5 | 2.121 (3) | C8—H81 | 1.04 (6) |
| Co1—O5i | 2.121 (3) | C9—H9 | 0.9300 |
| Co1—N1 | 2.163 (3) | C10—C9 | 1.377 (6) |
| Co1—N1i | 2.163 (3) | C10—C11 | 1.385 (6) |
| O1—C1 | 1.262 (5) | C10—H10 | 0.9300 |
| O2—C1 | 1.257 (5) | C11—H11 | 0.9300 |
| O3—C8 | 1.193 (7) | C12—C11 | 1.385 (6) |
| O4—C14 | 1.219 (5) | C12—C13 | 1.378 (6) |
| O5—H51 | 0.94 (4) | C13—H13 | 0.9300 |
| O5—H52 | 0.92 (2) | C14—N2 | 1.330 (6) |
| N1—C9 | 1.341 (5) | C14—C12 | 1.511 (6) |
| N1—C13 | 1.343 (5) | C15—C16 | 1.476 (9) |
| N2—C15 | 1.473 (7) | C15—H15A | 0.9700 |
| N2—C17 | 1.501 (7) | C15—H15B | 0.9700 |
| C2—C1 | 1.504 (6) | C16—H16A | 0.9600 |
| C2—C3 | 1.391 (6) | C16—H16B | 0.9600 |
| C2—C7 | 1.392 (6) | C16—H16C | 0.9600 |
| C3—C4 | 1.371 (6) | C17—C18 | 1.463 (8) |
| C3—H3 | 0.9300 | C17—H17A | 0.9700 |
| C4—C5 | 1.394 (7) | C17—H17B | 0.9700 |
| C4—H4 | 0.9300 | C18—H18A | 0.9600 |
| C5—C6 | 1.391 (6) | C18—H18B | 0.9600 |
| C5—C8 | 1.477 (7) | C18—H18C | 0.9600 |
| C6—H6 | 0.9300 | ||
| O1i—Co1—O1 | 180.00 (17) | O3—C8—C5 | 126.1 (6) |
| O1i—Co1—O5i | 88.16 (12) | O3—C8—H81 | 116 (3) |
| O1—Co1—O5i | 91.84 (12) | C5—C8—H81 | 117 (3) |
| O1i—Co1—O5 | 91.84 (12) | N1—C9—C10 | 123.3 (4) |
| O1—Co1—O5 | 88.16 (12) | N1—C9—H9 | 118.3 |
| O1i—Co1—N1 | 91.25 (12) | C10—C9—H9 | 118.3 |
| O1—Co1—N1 | 88.75 (12) | C9—C10—C11 | 118.5 (4) |
| O1i—Co1—N1i | 88.75 (12) | C9—C10—H10 | 120.7 |
| O1—Co1—N1i | 91.25 (12) | C11—C10—H10 | 120.7 |
| O5i—Co1—O5 | 180.00 (18) | C10—C11—H11 | 120.6 |
| O5i—Co1—N1 | 93.36 (12) | C12—C11—C10 | 118.8 (4) |
| O5—Co1—N1 | 86.64 (12) | C12—C11—H11 | 120.6 |
| O5i—Co1—N1i | 86.64 (12) | C11—C12—C14 | 123.6 (4) |
| O5—Co1—N1i | 93.36 (12) | C13—C12—C11 | 119.1 (4) |
| N1—Co1—N1i | 180.0 (2) | C13—C12—C14 | 116.9 (4) |
| C1—O1—Co1 | 127.5 (3) | N1—C13—C12 | 122.6 (4) |
| Co1—O5—H51 | 119 (4) | N1—C13—H13 | 118.7 |
| Co1—O5—H52 | 97 (3) | C12—C13—H13 | 118.7 |
| H52—O5—H51 | 105 (3) | O4—C14—N2 | 122.1 (4) |
| C9—N1—Co1 | 123.6 (3) | O4—C14—C12 | 117.9 (4) |
| C9—N1—C13 | 117.7 (4) | N2—C14—C12 | 120.0 (4) |
| C13—N1—Co1 | 118.6 (3) | N2—C15—C16 | 113.8 (6) |
| C14—N2—C15 | 125.4 (4) | N2—C15—H15A | 108.8 |
| C14—N2—C17 | 116.9 (4) | N2—C15—H15B | 108.8 |
| C15—N2—C17 | 117.6 (4) | C16—C15—H15A | 108.8 |
| O1—C1—C2 | 116.9 (4) | C16—C15—H15B | 108.8 |
| O2—C1—O1 | 125.1 (4) | H15A—C15—H15B | 107.7 |
| O2—C1—C2 | 118.0 (4) | C15—C16—H16A | 109.5 |
| C3—C2—C1 | 120.0 (4) | C15—C16—H16B | 109.5 |
| C3—C2—C7 | 118.7 (4) | C15—C16—H16C | 109.5 |
| C7—C2—C1 | 121.3 (4) | H16A—C16—H16B | 109.5 |
| C2—C3—H3 | 119.9 | H16A—C16—H16C | 109.5 |
| C4—C3—C2 | 120.3 (4) | H16B—C16—H16C | 109.5 |
| C4—C3—H3 | 119.9 | N2—C17—H17A | 109.4 |
| C3—C4—C5 | 120.5 (4) | N2—C17—H17B | 109.4 |
| C3—C4—H4 | 119.7 | C18—C17—N2 | 111.3 (5) |
| C5—C4—H4 | 119.7 | C18—C17—H17A | 109.4 |
| C4—C5—C8 | 119.7 (5) | C18—C17—H17B | 109.4 |
| C6—C5—C4 | 119.5 (4) | H17A—C17—H17B | 108.0 |
| C6—C5—C8 | 120.7 (5) | C17—C18—H18A | 109.5 |
| C5—C6—H6 | 120.2 | C17—C18—H18B | 109.5 |
| C7—C6—C5 | 119.5 (4) | C17—C18—H18C | 109.5 |
| C7—C6—H6 | 120.2 | H18A—C18—H18B | 109.5 |
| C2—C7—H7 | 119.3 | H18A—C18—H18C | 109.5 |
| C6—C7—C2 | 121.4 (4) | H18B—C18—H18C | 109.5 |
| C6—C7—H7 | 119.3 | ||
| O5i—Co1—O1—C1 | −11.3 (4) | C1—C2—C3—C4 | 179.5 (4) |
| O5—Co1—O1—C1 | 168.7 (4) | C7—C2—C3—C4 | −1.1 (7) |
| N1—Co1—O1—C1 | 82.0 (4) | C1—C2—C7—C6 | −178.9 (4) |
| N1i—Co1—O1—C1 | −98.0 (4) | C3—C2—C7—C6 | 1.8 (7) |
| O1i—Co1—N1—C9 | 33.5 (3) | C2—C3—C4—C5 | −0.3 (7) |
| O1—Co1—N1—C9 | −146.5 (3) | C3—C4—C5—C6 | 1.2 (8) |
| O1i—Co1—N1—C13 | −148.7 (3) | C3—C4—C5—C8 | −179.0 (5) |
| O1—Co1—N1—C13 | 31.3 (3) | C4—C5—C6—C7 | −0.6 (8) |
| O5i—Co1—N1—C9 | −54.7 (3) | C8—C5—C6—C7 | 179.6 (5) |
| O5—Co1—N1—C9 | 125.3 (3) | C4—C5—C8—O3 | 174.2 (7) |
| O5i—Co1—N1—C13 | 123.0 (3) | C6—C5—C8—O3 | −6.0 (10) |
| O5—Co1—N1—C13 | −57.0 (3) | C2—C7—C6—C5 | −1.0 (7) |
| Co1—O1—C1—O2 | 27.6 (6) | C11—C10—C9—N1 | −0.6 (7) |
| Co1—O1—C1—C2 | −151.1 (3) | C9—C10—C11—C12 | 1.5 (7) |
| Co1—N1—C9—C10 | 177.3 (3) | C13—C12—C11—C10 | −1.2 (6) |
| C13—N1—C9—C10 | −0.5 (6) | C14—C12—C11—C10 | 171.5 (4) |
| Co1—N1—C13—C12 | −177.2 (3) | C11—C12—C13—N1 | 0.1 (6) |
| C9—N1—C13—C12 | 0.7 (6) | C14—C12—C13—N1 | −173.1 (4) |
| C14—N2—C15—C16 | 109.8 (7) | O4—C14—C12—C11 | −114.3 (5) |
| C17—N2—C15—C16 | −70.5 (8) | O4—C14—C12—C13 | 58.6 (6) |
| C14—N2—C17—C18 | −77.7 (7) | N2—C14—C12—C11 | 62.5 (6) |
| C15—N2—C17—C18 | 102.6 (6) | N2—C14—C12—C13 | −124.6 (5) |
| C3—C2—C1—O1 | 175.2 (4) | O4—C14—N2—C15 | −178.4 (5) |
| C3—C2—C1—O2 | −3.6 (6) | O4—C14—N2—C17 | 1.9 (7) |
| C7—C2—C1—O1 | −4.1 (6) | C12—C14—N2—C15 | 5.0 (8) |
| C7—C2—C1—O2 | 177.1 (4) | C12—C14—N2—C17 | −174.7 (4) |
| H··· | ||||
| O5—H51···O4ii | 0.94 (4) | 1.86 (4) | 2.787 (5) | 174 (6) |
| O5—H52···O2i | 0.92 (2) | 1.73 (4) | 2.646 (5) | 168 (6) |
Selected bond lengths (Å)
| Co1—O1 | 2.088 (3) |
| Co1—O5 | 2.121 (3) |
| Co1—N1 | 2.163 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O5—H51⋯O4i | 0.94 (4) | 1.86 (4) | 2.787 (5) | 174 (6) |
| O5—H52⋯O2ii | 0.92 (2) | 1.73 (4) | 2.646 (5) | 168 (6) |
Symmetry codes: (i) ; (ii) .