| Literature DB >> 23795008 |
Nihat Bozkurt1, Nefise Dilek, Nagihan Caylak Delibaş, Hacali Necefoğlu, Tuncer Hökelek.
Abstract
In the title complex, [Co(C7H4ClO2)2(C6H6N2O)2(H2O)2], the Co(II) atom is located on an inversion center and is coordinated by two 3-chloro-benzoate (CB) anions, two nicotinamide (NA) ligands and two water mol-ecules. The four O atoms in the equatorial plane form a slightly distorted square-planar arrangement, while the slightly distorted octa-hedral coordination is completed by the two N atoms of the NA ligands in the axial positions. The dihedral angle between the carboxyl-ate group and the adjacent benzene ring is 9.14 (9)°, while the pyridine and benzene rings are oriented at a dihedral angle of 82.18 (8)°. In the crystal, N-H⋯O and O-H⋯O hydrogen bonds link the mol-ecules into a two-dimensional network lying parallel to (101). π-π stacking between parallel pyridine rings of adjacent mol-ecules [centroid-centroid distance = 3.7765 (8) Å] further stabilizes the crystal structure.Entities:
Year: 2013 PMID: 23795008 PMCID: PMC3684906 DOI: 10.1107/S160053681301458X
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Co(C7H4ClO2)2(C6H6N2O)2(H2O)2] | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 4857 reflections |
| θ = 2.3–24.4° | |
| µ = 0.88 mm−1 | |
| β = 90.546 (2)° | Block, pink |
| 0.35 × 0.22 × 0.18 mm | |
| Bruker APEXII CCD area-detector diffractometer | 2797 independent reflections |
| Radiation source: fine-focus sealed tube | 2667 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 26.4°, θmin = 2.3° |
| Absorption correction: multi-scan ( | |
| 18960 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max = 0.001 | |
| 2797 reflections | Δρmax = 0.32 e Å−3 |
| 204 parameters | Δρmin = −0.33 e Å−3 |
| 52 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.0334 (17) |
| Geometry. Bond distances, angles etc. have been calculated using the rounded fractional coordinates. All su's are estimated from the variances of the (full) variance-covariance matrix. The cell esds are taken into account in the estimation of distances, angles and torsion angles |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| Co1 | 0.00000 | 1.00000 | 1.00000 | 0.0221 (1) | |
| Cl1 | 0.57400 (4) | 0.77742 (8) | 0.87425 (3) | 0.0604 (2) | |
| O1 | 0.17264 (10) | 0.87980 (18) | 1.18080 (9) | 0.0518 (4) | |
| O2 | 0.17291 (8) | 0.94984 (12) | 1.02212 (8) | 0.0299 (3) | |
| O3 | 0.16810 (10) | 0.34420 (12) | 0.81282 (10) | 0.0415 (4) | |
| O4 | 0.04558 (10) | 1.07995 (12) | 0.85606 (8) | 0.0298 (3) | |
| N1 | −0.02319 (10) | 0.77771 (13) | 0.93492 (9) | 0.0258 (3) | |
| N2 | 0.23334 (16) | 0.56716 (18) | 0.76095 (16) | 0.0592 (6) | |
| C1 | 0.21833 (12) | 0.88839 (17) | 1.09796 (11) | 0.0293 (4) | |
| C2 | 0.33518 (12) | 0.81535 (17) | 1.08465 (11) | 0.0286 (4) | |
| C3 | 0.39495 (13) | 0.83285 (18) | 0.99657 (11) | 0.0316 (4) | |
| C4 | 0.49988 (13) | 0.7599 (2) | 0.98487 (12) | 0.0368 (5) | |
| C5 | 0.54679 (15) | 0.6700 (2) | 1.05879 (14) | 0.0464 (6) | |
| C6 | 0.48691 (17) | 0.6533 (2) | 1.14586 (14) | 0.0496 (6) | |
| C7 | 0.38168 (15) | 0.7255 (2) | 1.15907 (12) | 0.0388 (5) | |
| C8 | 0.06524 (12) | 0.70512 (15) | 0.89207 (11) | 0.0268 (4) | |
| C9 | 0.05526 (12) | 0.56102 (15) | 0.85229 (10) | 0.0258 (4) | |
| C10 | −0.05151 (14) | 0.48869 (16) | 0.85705 (12) | 0.0314 (4) | |
| C11 | −0.14353 (13) | 0.56408 (18) | 0.89921 (13) | 0.0356 (5) | |
| C12 | −0.12591 (12) | 0.70790 (16) | 0.93721 (11) | 0.0303 (4) | |
| C13 | 0.15664 (14) | 0.48213 (16) | 0.80673 (12) | 0.0304 (4) | |
| H3 | 0.36460 | 0.89300 | 0.94610 | 0.0380* | |
| H5 | 0.61770 | 0.62160 | 1.04990 | 0.0560* | |
| H6 | 0.51750 | 0.59290 | 1.19620 | 0.0590* | |
| H7 | 0.34200 | 0.71360 | 1.21820 | 0.0470* | |
| H8 | 0.13670 | 0.75380 | 0.88890 | 0.0320* | |
| H10 | −0.06090 | 0.39100 | 0.83220 | 0.0380* | |
| H11 | −0.21640 | 0.51890 | 0.90200 | 0.0430* | |
| H12 | −0.18830 | 0.75810 | 0.96560 | 0.0360* | |
| H21 | 0.221 (2) | 0.659 (3) | 0.7492 (19) | 0.066 (7)* | |
| H22 | 0.293 (2) | 0.526 (3) | 0.7323 (19) | 0.063 (7)* | |
| H41 | −0.028 (2) | 1.098 (3) | 0.8311 (18) | 0.069 (7)* | |
| H42 | 0.079 (2) | 1.163 (3) | 0.8530 (17) | 0.055 (6)* |
| Co1 | 0.0201 (2) | 0.0183 (2) | 0.0280 (2) | 0.0011 (1) | 0.0066 (1) | −0.0026 (1) |
| Cl1 | 0.0389 (2) | 0.1013 (4) | 0.0412 (3) | 0.0171 (2) | 0.0140 (2) | 0.0029 (2) |
| O1 | 0.0339 (6) | 0.0875 (10) | 0.0342 (6) | 0.0108 (6) | 0.0090 (5) | 0.0038 (6) |
| O2 | 0.0230 (5) | 0.0306 (5) | 0.0362 (5) | 0.0039 (4) | 0.0044 (4) | 0.0007 (4) |
| O3 | 0.0403 (6) | 0.0194 (5) | 0.0651 (8) | 0.0024 (4) | 0.0211 (5) | −0.0007 (5) |
| O4 | 0.0297 (5) | 0.0267 (6) | 0.0332 (5) | −0.0023 (4) | 0.0098 (4) | −0.0001 (4) |
| N1 | 0.0256 (6) | 0.0205 (5) | 0.0313 (6) | 0.0005 (4) | 0.0049 (5) | −0.0027 (4) |
| N2 | 0.0569 (10) | 0.0231 (7) | 0.0985 (14) | 0.0036 (7) | 0.0507 (10) | 0.0049 (8) |
| C1 | 0.0247 (7) | 0.0308 (7) | 0.0324 (7) | −0.0020 (5) | 0.0034 (5) | −0.0042 (6) |
| C2 | 0.0261 (7) | 0.0297 (7) | 0.0301 (7) | 0.0001 (6) | −0.0001 (5) | −0.0025 (6) |
| C3 | 0.0273 (7) | 0.0369 (8) | 0.0307 (7) | 0.0051 (6) | 0.0000 (6) | 0.0031 (6) |
| C4 | 0.0286 (7) | 0.0489 (10) | 0.0331 (8) | 0.0054 (6) | 0.0038 (6) | −0.0028 (7) |
| C5 | 0.0344 (8) | 0.0564 (11) | 0.0482 (10) | 0.0200 (8) | −0.0027 (7) | 0.0004 (8) |
| C6 | 0.0479 (10) | 0.0572 (11) | 0.0435 (10) | 0.0165 (9) | −0.0075 (8) | 0.0127 (8) |
| C7 | 0.0401 (9) | 0.0459 (9) | 0.0303 (8) | 0.0038 (7) | 0.0005 (6) | 0.0045 (7) |
| C8 | 0.0251 (6) | 0.0214 (6) | 0.0339 (7) | −0.0006 (5) | 0.0068 (5) | −0.0010 (5) |
| C9 | 0.0292 (7) | 0.0197 (6) | 0.0287 (7) | 0.0017 (5) | 0.0063 (5) | 0.0004 (5) |
| C10 | 0.0336 (8) | 0.0220 (7) | 0.0388 (8) | −0.0030 (5) | 0.0051 (6) | −0.0062 (5) |
| C11 | 0.0270 (7) | 0.0312 (8) | 0.0486 (9) | −0.0058 (6) | 0.0062 (6) | −0.0072 (7) |
| C12 | 0.0249 (7) | 0.0276 (7) | 0.0384 (8) | 0.0010 (5) | 0.0073 (6) | −0.0032 (6) |
| C13 | 0.0320 (8) | 0.0211 (7) | 0.0382 (8) | 0.0000 (5) | 0.0112 (6) | −0.0025 (6) |
| Co1—O2 | 2.0592 (9) | C2—C3 | 1.389 (2) |
| Co1—O4 | 2.1385 (11) | C3—C4 | 1.380 (2) |
| Co1—N1 | 2.1640 (12) | C4—C5 | 1.381 (2) |
| Co1—O2i | 2.0592 (9) | C5—C6 | 1.377 (3) |
| Co1—O4i | 2.1385 (11) | C6—C7 | 1.382 (3) |
| Co1—N1i | 2.1640 (12) | C8—C9 | 1.3841 (19) |
| Cl1—C4 | 1.7350 (16) | C9—C13 | 1.497 (2) |
| O1—C1 | 1.2435 (19) | C9—C10 | 1.387 (2) |
| O2—C1 | 1.2676 (18) | C10—C11 | 1.379 (2) |
| O3—C13 | 1.2262 (18) | C11—C12 | 1.383 (2) |
| O4—H41 | 0.92 (2) | C3—H3 | 0.9300 |
| O4—H42 | 0.83 (3) | C5—H5 | 0.9300 |
| N1—C12 | 1.3344 (18) | C6—H6 | 0.9300 |
| N1—C8 | 1.3392 (18) | C7—H7 | 0.9300 |
| N2—C13 | 1.317 (2) | C8—H8 | 0.9300 |
| N2—H21 | 0.84 (3) | C10—H10 | 0.9300 |
| N2—H22 | 0.87 (2) | C11—H11 | 0.9300 |
| C1—C2 | 1.504 (2) | C12—H12 | 0.9300 |
| C2—C7 | 1.384 (2) | ||
| O2—Co1—O4 | 87.55 (4) | Cl1—C4—C3 | 119.73 (12) |
| O2—Co1—N1 | 88.84 (4) | C3—C4—C5 | 121.47 (15) |
| O2—Co1—O2i | 180.00 | Cl1—C4—C5 | 118.79 (13) |
| O2—Co1—O4i | 92.45 (4) | C4—C5—C6 | 118.90 (16) |
| O2—Co1—N1i | 91.16 (4) | C5—C6—C7 | 120.53 (17) |
| O4—Co1—N1 | 87.69 (4) | C2—C7—C6 | 120.25 (15) |
| O2i—Co1—O4 | 92.45 (4) | N1—C8—C9 | 123.09 (13) |
| O4—Co1—O4i | 180.00 | C8—C9—C13 | 121.62 (13) |
| O4—Co1—N1i | 92.31 (4) | C8—C9—C10 | 118.33 (13) |
| O2i—Co1—N1 | 91.16 (4) | C10—C9—C13 | 120.05 (12) |
| O4i—Co1—N1 | 92.31 (4) | C9—C10—C11 | 118.86 (13) |
| N1—Co1—N1i | 180.00 | C10—C11—C12 | 119.01 (14) |
| O2i—Co1—O4i | 87.55 (4) | N1—C12—C11 | 122.80 (13) |
| O2i—Co1—N1i | 88.84 (4) | N2—C13—C9 | 117.24 (13) |
| O4i—Co1—N1i | 87.69 (4) | O3—C13—N2 | 121.59 (16) |
| Co1—O2—C1 | 126.89 (9) | O3—C13—C9 | 121.16 (14) |
| H41—O4—H42 | 105 (2) | C2—C3—H3 | 120.00 |
| Co1—O4—H41 | 99.0 (15) | C4—C3—H3 | 120.00 |
| Co1—O4—H42 | 117.1 (16) | C4—C5—H5 | 121.00 |
| Co1—N1—C8 | 121.14 (9) | C6—C5—H5 | 121.00 |
| Co1—N1—C12 | 120.97 (9) | C5—C6—H6 | 120.00 |
| C8—N1—C12 | 117.88 (12) | C7—C6—H6 | 120.00 |
| H21—N2—H22 | 117 (2) | C2—C7—H7 | 120.00 |
| C13—N2—H21 | 121.8 (16) | C6—C7—H7 | 120.00 |
| C13—N2—H22 | 120.5 (17) | N1—C8—H8 | 118.00 |
| O1—C1—O2 | 125.34 (14) | C9—C8—H8 | 118.00 |
| O1—C1—C2 | 117.92 (13) | C9—C10—H10 | 121.00 |
| O2—C1—C2 | 116.70 (13) | C11—C10—H10 | 121.00 |
| C1—C2—C3 | 120.41 (13) | C10—C11—H11 | 121.00 |
| C1—C2—C7 | 119.92 (13) | C12—C11—H11 | 120.00 |
| C3—C2—C7 | 119.63 (14) | N1—C12—H12 | 119.00 |
| C2—C3—C4 | 119.23 (14) | C11—C12—H12 | 119.00 |
| O4—Co1—O2—C1 | −177.85 (12) | O2—C1—C2—C7 | −169.65 (14) |
| N1—Co1—O2—C1 | −90.11 (12) | C1—C2—C3—C4 | −177.53 (14) |
| O4i—Co1—O2—C1 | 2.15 (12) | C7—C2—C3—C4 | 0.1 (2) |
| N1i—Co1—O2—C1 | 89.89 (12) | C1—C2—C7—C6 | 177.50 (15) |
| O2—Co1—N1—C8 | −26.16 (11) | C3—C2—C7—C6 | −0.1 (2) |
| O2—Co1—N1—C12 | 153.10 (11) | C2—C3—C4—Cl1 | 178.62 (12) |
| O4—Co1—N1—C8 | 61.44 (11) | C2—C3—C4—C5 | 0.0 (2) |
| O4—Co1—N1—C12 | −119.31 (11) | Cl1—C4—C5—C6 | −178.62 (14) |
| O2i—Co1—N1—C8 | 153.84 (11) | C3—C4—C5—C6 | 0.1 (3) |
| O2i—Co1—N1—C12 | −26.90 (11) | C4—C5—C6—C7 | −0.1 (3) |
| O4i—Co1—N1—C8 | −118.56 (11) | C5—C6—C7—C2 | 0.1 (3) |
| O4i—Co1—N1—C12 | 60.69 (11) | N1—C8—C9—C10 | 0.1 (2) |
| Co1—O2—C1—O1 | −18.0 (2) | N1—C8—C9—C13 | −178.77 (13) |
| Co1—O2—C1—C2 | 159.69 (10) | C8—C9—C10—C11 | 1.3 (2) |
| Co1—N1—C8—C9 | 177.93 (11) | C13—C9—C10—C11 | −179.86 (14) |
| C12—N1—C8—C9 | −1.4 (2) | C8—C9—C13—O3 | 146.12 (16) |
| Co1—N1—C12—C11 | −177.98 (12) | C8—C9—C13—N2 | −33.2 (2) |
| C8—N1—C12—C11 | 1.3 (2) | C10—C9—C13—O3 | −32.7 (2) |
| O1—C1—C2—C3 | −174.24 (15) | C10—C9—C13—N2 | 148.03 (17) |
| O1—C1—C2—C7 | 8.2 (2) | C9—C10—C11—C12 | −1.3 (2) |
| O2—C1—C2—C3 | 7.9 (2) | C10—C11—C12—N1 | 0.0 (2) |
| H··· | ||||
| N2—H21···O3ii | 0.84 (3) | 2.24 (3) | 2.876 (2) | 133 (2) |
| N2—H22···O4iii | 0.87 (2) | 2.27 (2) | 3.012 (2) | 143 (2) |
| O4—H41···O1i | 0.92 (2) | 1.68 (2) | 2.5822 (16) | 164 (2) |
| O4—H42···O3iv | 0.83 (3) | 1.98 (3) | 2.7892 (15) | 166 (2) |
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N2—H21⋯O3i | 0.84 (3) | 2.24 (3) | 2.876 (2) | 133 (2) |
| N2—H22⋯O4ii | 0.87 (2) | 2.27 (2) | 3.012 (2) | 143 (2) |
| O4—H41⋯O1iii | 0.92 (2) | 1.68 (2) | 2.5822 (16) | 164 (2) |
| O4—H42⋯O3iv | 0.83 (3) | 1.98 (3) | 2.7892 (15) | 166 (2) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .