| Literature DB >> 21582098 |
Mustafa Sertçelik, Barış Tercan, Ertan Sahin, Hacali Necefoğlu, Tuncer Hökelek.
Abstract
In the title centrosymmetric mononuclear Ni(II) compound, [Ni(C(8)H(5)O(3))(2)(C(10)H(14)N(2)O)(2)(H(2)O)(2)], the central Ni(II) atom is coordinated by two O atoms from two 4-formyl-benzoate (FOB) ligands, two O atoms from two water mol-ecules and two N atoms from two diethyl-nicotinamide (DENA) ligands. The coordination geometry is slightly distorted octa-hedral, with four O atoms in the equatorial plane and two N atoms in axial positions. Intra-molecular O-H⋯O hydrogen bonds are observed. In the crystal structure, mol-ecules are linked into chains along the a axis by inter-molecular O-H⋯O hydrogen bonds. The structure is further stabilized by π-π inter-actions between the pyridine rings of DENA units, with a centroid-centroid distance of 3.668 (2) Å.Entities:
Year: 2009 PMID: 21582098 PMCID: PMC2968564 DOI: 10.1107/S1600536809006345
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Ni(C8H5O3)2(C10H14N2O)2(H2O)2] | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 4227 reflections | |
| θ = 2.5–26.4° | |
| µ = 0.59 mm−1 | |
| α = 85.034 (5)° | |
| β = 78.576 (4)° | Prism, green |
| γ = 67.594 (3)° | 0.35 × 0.20 × 0.15 mm |
| Rigaku R-AXIS RAPID-S diffractometer | 3740 independent reflections |
| Radiation source: fine-focus sealed tube | 2797 reflections with |
| graphite | |
| ω scans | θmax = 26.4°, θmin = 2.5° |
| Absorption correction: multi-scan (Blessing, 1995) | |
| 19676 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3740 reflections | (Δ/σ)max = 0.001 |
| 242 parameters | Δρmax = 0.50 e Å−3 |
| 3 restraints | Δρmin = −0.31 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| O5 | −0.2711 (4) | −0.0197 (4) | 0.06069 (16) | 0.0494 (6) | |
| H52 | −0.284 (6) | 0.028 (4) | 0.1070 (13) | 0.069 (14)* | |
| H51 | −0.260 (6) | −0.1180 (19) | 0.074 (2) | 0.072 (15)* | |
| Ni1 | 0.0000 | 0.0000 | 0.0000 | 0.03948 (19) | |
| O1 | 0.0244 (3) | 0.1122 (3) | 0.10462 (14) | 0.0465 (6) | |
| O2 | −0.2567 (4) | 0.1272 (3) | 0.19683 (16) | 0.0569 (7) | |
| N1 | 0.1775 (4) | −0.2306 (3) | 0.04762 (17) | 0.0427 (7) | |
| O4 | 0.7320 (4) | −0.3311 (3) | 0.12366 (16) | 0.0579 (7) | |
| C1 | −0.0812 (5) | 0.1254 (4) | 0.1788 (2) | 0.0430 (8) | |
| C12 | 0.4355 (5) | −0.3815 (4) | 0.1297 (2) | 0.0423 (8) | |
| C13 | 0.3191 (5) | −0.2372 (4) | 0.0918 (2) | 0.0433 (8) | |
| H13 | 0.3401 | −0.1398 | 0.0974 | 0.052* | |
| C7 | 0.2092 (5) | 0.1420 (4) | 0.2370 (2) | 0.0467 (8) | |
| H7 | 0.2787 | 0.1384 | 0.1810 | 0.056* | |
| C9 | 0.1550 (5) | −0.3738 (4) | 0.0380 (2) | 0.0467 (8) | |
| H9 | 0.0593 | −0.3722 | 0.0067 | 0.056* | |
| C2 | 0.0178 (5) | 0.1355 (4) | 0.2521 (2) | 0.0420 (8) | |
| N2 | 0.6115 (5) | −0.4182 (4) | 0.2506 (2) | 0.0617 (9) | |
| C3 | −0.0823 (5) | 0.1368 (4) | 0.3360 (2) | 0.0502 (9) | |
| H3 | −0.2093 | 0.1304 | 0.3472 | 0.060* | |
| C11 | 0.4075 (5) | −0.5277 (4) | 0.1196 (2) | 0.0477 (9) | |
| H11 | 0.4824 | −0.6269 | 0.1445 | 0.057* | |
| O3 | 0.4414 (5) | 0.1916 (5) | 0.4558 (2) | 0.0974 (11) | |
| C14 | 0.6023 (5) | −0.3740 (4) | 0.1690 (2) | 0.0474 (9) | |
| C4 | 0.0071 (6) | 0.1476 (5) | 0.4030 (2) | 0.0559 (10) | |
| H4 | −0.0606 | 0.1483 | 0.4591 | 0.067* | |
| C6 | 0.2976 (5) | 0.1538 (5) | 0.3041 (2) | 0.0523 (9) | |
| H6 | 0.4251 | 0.1592 | 0.2932 | 0.063* | |
| C10 | 0.2674 (5) | −0.5233 (4) | 0.0723 (2) | 0.0505 (9) | |
| H10 | 0.2483 | −0.6202 | 0.0635 | 0.061* | |
| C5 | 0.1956 (6) | 0.1575 (5) | 0.3878 (2) | 0.0533 (9) | |
| C17 | 0.7912 (7) | −0.4225 (6) | 0.2841 (3) | 0.0746 (13) | |
| H17A | 0.8047 | −0.4912 | 0.3356 | 0.090* | |
| H17B | 0.9119 | −0.4723 | 0.2417 | 0.090* | |
| C15 | 0.4604 (7) | −0.4666 (6) | 0.3106 (3) | 0.0740 (13) | |
| H15A | 0.3689 | −0.4823 | 0.2785 | 0.089* | |
| H15B | 0.5285 | −0.5725 | 0.3373 | 0.089* | |
| C16 | 0.3433 (9) | −0.3450 (9) | 0.3777 (4) | 0.137 (3) | |
| H16A | 0.2414 | −0.3797 | 0.4119 | 0.206* | |
| H16B | 0.2804 | −0.2383 | 0.3518 | 0.206* | |
| H16C | 0.4309 | −0.3367 | 0.4134 | 0.206* | |
| C8 | 0.2863 (7) | 0.1717 (6) | 0.4606 (3) | 0.0767 (13) | |
| H8 | 0.2159 | 0.1645 | 0.5154 | 0.092* | |
| C18 | 0.7725 (8) | −0.2525 (6) | 0.3038 (3) | 0.0961 (17) | |
| H18A | 0.8938 | −0.2582 | 0.3212 | 0.144* | |
| H18B | 0.6600 | −0.2068 | 0.3494 | 0.144* | |
| H18C | 0.7518 | −0.1827 | 0.2537 | 0.144* |
| O5 | 0.0454 (14) | 0.0569 (17) | 0.0485 (16) | −0.0216 (13) | −0.0106 (12) | 0.0032 (14) |
| Ni1 | 0.0359 (3) | 0.0445 (4) | 0.0398 (4) | −0.0152 (3) | −0.0123 (3) | 0.0044 (3) |
| O1 | 0.0473 (14) | 0.0542 (15) | 0.0420 (14) | −0.0207 (12) | −0.0141 (11) | 0.0019 (11) |
| O2 | 0.0440 (14) | 0.0733 (18) | 0.0544 (15) | −0.0224 (13) | −0.0070 (12) | −0.0074 (13) |
| N1 | 0.0374 (15) | 0.0452 (17) | 0.0475 (17) | −0.0160 (13) | −0.0122 (12) | 0.0030 (13) |
| O4 | 0.0500 (15) | 0.0703 (18) | 0.0611 (16) | −0.0315 (14) | −0.0132 (13) | 0.0098 (14) |
| C1 | 0.0424 (19) | 0.0387 (19) | 0.046 (2) | −0.0103 (15) | −0.0139 (16) | 0.0022 (15) |
| C12 | 0.0368 (18) | 0.050 (2) | 0.0411 (19) | −0.0174 (16) | −0.0105 (15) | 0.0058 (16) |
| C13 | 0.0418 (18) | 0.0436 (19) | 0.047 (2) | −0.0158 (16) | −0.0144 (16) | 0.0009 (16) |
| C7 | 0.048 (2) | 0.053 (2) | 0.0386 (19) | −0.0192 (17) | −0.0045 (15) | −0.0002 (16) |
| C9 | 0.046 (2) | 0.054 (2) | 0.046 (2) | −0.0236 (18) | −0.0159 (16) | 0.0037 (17) |
| C2 | 0.0421 (19) | 0.0426 (19) | 0.0410 (19) | −0.0144 (16) | −0.0106 (15) | 0.0013 (15) |
| N2 | 0.061 (2) | 0.080 (2) | 0.057 (2) | −0.0371 (18) | −0.0232 (16) | 0.0143 (18) |
| C3 | 0.044 (2) | 0.057 (2) | 0.048 (2) | −0.0182 (18) | −0.0081 (16) | 0.0019 (18) |
| C11 | 0.0444 (19) | 0.046 (2) | 0.051 (2) | −0.0137 (17) | −0.0145 (16) | 0.0106 (17) |
| O3 | 0.101 (3) | 0.155 (3) | 0.069 (2) | −0.076 (3) | −0.0352 (19) | 0.005 (2) |
| C14 | 0.044 (2) | 0.050 (2) | 0.050 (2) | −0.0176 (17) | −0.0140 (17) | 0.0077 (17) |
| C4 | 0.062 (2) | 0.066 (3) | 0.038 (2) | −0.024 (2) | −0.0041 (17) | −0.0028 (18) |
| C6 | 0.051 (2) | 0.061 (2) | 0.051 (2) | −0.0257 (19) | −0.0137 (17) | −0.0005 (18) |
| C10 | 0.054 (2) | 0.046 (2) | 0.057 (2) | −0.0224 (18) | −0.0179 (18) | 0.0045 (17) |
| C5 | 0.058 (2) | 0.062 (2) | 0.044 (2) | −0.025 (2) | −0.0139 (18) | 0.0018 (18) |
| C17 | 0.081 (3) | 0.078 (3) | 0.076 (3) | −0.033 (3) | −0.038 (2) | 0.014 (2) |
| C15 | 0.081 (3) | 0.092 (3) | 0.057 (3) | −0.040 (3) | −0.019 (2) | 0.009 (2) |
| C16 | 0.102 (5) | 0.176 (7) | 0.131 (5) | −0.059 (5) | 0.026 (4) | −0.069 (5) |
| C8 | 0.081 (3) | 0.106 (4) | 0.054 (3) | −0.042 (3) | −0.024 (2) | −0.003 (2) |
| C18 | 0.128 (5) | 0.085 (4) | 0.094 (4) | −0.046 (3) | −0.049 (3) | −0.002 (3) |
| O5—Ni1 | 2.084 (2) | N2—C17 | 1.496 (5) |
| O5—H52 | 0.85 (3) | C3—C4 | 1.380 (5) |
| O5—H51 | 0.84 (2) | C3—H3 | 0.93 |
| Ni1—O1 | 2.069 (2) | C11—C10 | 1.371 (5) |
| Ni1—O1i | 2.069 (2) | C11—H11 | 0.93 |
| Ni1—O5i | 2.084 (2) | O3—C8 | 1.194 (5) |
| Ni1—N1 | 2.100 (3) | C4—C5 | 1.382 (5) |
| Ni1—N1i | 2.100 (3) | C4—H4 | 0.93 |
| O1—C1 | 1.263 (4) | C6—C5 | 1.386 (5) |
| O2—C1 | 1.249 (4) | C6—H6 | 0.93 |
| N1—C9 | 1.340 (4) | C10—H10 | 0.93 |
| N1—C13 | 1.341 (4) | C5—C8 | 1.478 (5) |
| O4—C14 | 1.227 (4) | C17—C18 | 1.486 (6) |
| C1—C2 | 1.511 (4) | C17—H17A | 0.97 |
| C12—C13 | 1.384 (4) | C17—H17B | 0.97 |
| C12—C11 | 1.389 (5) | C15—C16 | 1.459 (6) |
| C12—C14 | 1.498 (4) | C15—H15A | 0.97 |
| C13—H13 | 0.93 | C15—H15B | 0.97 |
| C7—C6 | 1.380 (4) | C16—H16A | 0.96 |
| C7—C2 | 1.391 (4) | C16—H16B | 0.96 |
| C7—H7 | 0.93 | C16—H16C | 0.96 |
| C9—C10 | 1.379 (5) | C8—H8 | 0.93 |
| C9—H9 | 0.93 | C18—H18A | 0.96 |
| C2—C3 | 1.388 (5) | C18—H18B | 0.96 |
| N2—C14 | 1.328 (4) | C18—H18C | 0.96 |
| N2—C15 | 1.473 (5) | ||
| Ni1—O5—H52 | 98 (3) | C10—C11—C12 | 118.8 (3) |
| Ni1—O5—H51 | 113 (3) | C10—C11—H11 | 120.6 |
| H52—O5—H51 | 106 (2) | C12—C11—H11 | 120.6 |
| O1—Ni1—O1i | 180.00 (6) | O4—C14—N2 | 121.3 (3) |
| O1—Ni1—O5 | 92.91 (10) | O4—C14—C12 | 118.6 (3) |
| O1i—Ni1—O5 | 87.09 (10) | N2—C14—C12 | 120.1 (3) |
| O1—Ni1—O5i | 87.09 (10) | C3—C4—C5 | 121.0 (3) |
| O1i—Ni1—O5i | 92.91 (10) | C3—C4—H4 | 119.5 |
| O5—Ni1—O5i | 180.00 (19) | C5—C4—H4 | 119.5 |
| O1—Ni1—N1 | 88.53 (10) | C7—C6—C5 | 119.8 (3) |
| O1i—Ni1—N1 | 91.47 (10) | C7—C6—H6 | 120.1 |
| O5—Ni1—N1 | 93.76 (10) | C5—C6—H6 | 120.1 |
| O5i—Ni1—N1 | 86.24 (10) | C11—C10—C9 | 119.3 (3) |
| O1—Ni1—N1i | 91.47 (10) | C11—C10—H10 | 120.3 |
| O1i—Ni1—N1i | 88.53 (10) | C9—C10—H10 | 120.3 |
| O5—Ni1—N1i | 86.24 (10) | C4—C5—C6 | 119.4 (3) |
| O5i—Ni1—N1i | 93.76 (10) | C4—C5—C8 | 119.8 (4) |
| N1—Ni1—N1i | 180.0 (2) | C6—C5—C8 | 120.8 (4) |
| C1—O1—Ni1 | 126.8 (2) | C18—C17—N2 | 111.3 (4) |
| C9—N1—C13 | 117.2 (3) | C18—C17—H17A | 109.4 |
| C9—N1—Ni1 | 123.6 (2) | N2—C17—H17A | 109.4 |
| C13—N1—Ni1 | 119.3 (2) | C18—C17—H17B | 109.4 |
| O2—C1—O1 | 125.9 (3) | N2—C17—H17B | 109.4 |
| O2—C1—C2 | 117.7 (3) | H17A—C17—H17B | 108.0 |
| O1—C1—C2 | 116.3 (3) | C16—C15—N2 | 113.6 (4) |
| C13—C12—C11 | 118.2 (3) | C16—C15—H15A | 108.8 |
| C13—C12—C14 | 117.4 (3) | N2—C15—H15A | 108.8 |
| C11—C12—C14 | 123.8 (3) | C16—C15—H15B | 108.8 |
| N1—C13—C12 | 123.4 (3) | N2—C15—H15B | 108.8 |
| N1—C13—H13 | 118.3 | H15A—C15—H15B | 107.7 |
| C12—C13—H13 | 118.3 | C15—C16—H16A | 109.5 |
| C6—C7—C2 | 120.9 (3) | C15—C16—H16B | 109.5 |
| C6—C7—H7 | 119.6 | H16A—C16—H16B | 109.5 |
| C2—C7—H7 | 119.6 | C15—C16—H16C | 109.5 |
| N1—C9—C10 | 123.0 (3) | H16A—C16—H16C | 109.5 |
| N1—C9—H9 | 118.5 | H16B—C16—H16C | 109.5 |
| C10—C9—H9 | 118.5 | O3—C8—C5 | 126.2 (4) |
| C3—C2—C7 | 119.0 (3) | O3—C8—H8 | 116.9 |
| C3—C2—C1 | 119.8 (3) | C5—C8—H8 | 116.9 |
| C7—C2—C1 | 121.2 (3) | C17—C18—H18A | 109.5 |
| C14—N2—C15 | 125.2 (3) | C17—C18—H18B | 109.5 |
| C14—N2—C17 | 117.6 (3) | H18A—C18—H18B | 109.5 |
| C15—N2—C17 | 117.1 (3) | C17—C18—H18C | 109.5 |
| C4—C3—C2 | 119.9 (3) | H18A—C18—H18C | 109.5 |
| C4—C3—H3 | 120.1 | H18B—C18—H18C | 109.5 |
| C2—C3—H3 | 120.1 | ||
| O5—Ni1—O1—C1 | 10.8 (3) | C7—C2—C3—C4 | 1.2 (5) |
| O5i—Ni1—O1—C1 | −169.2 (3) | C1—C2—C3—C4 | −179.4 (3) |
| N1—Ni1—O1—C1 | −82.9 (3) | C13—C12—C11—C10 | 0.4 (5) |
| N1i—Ni1—O1—C1 | 97.1 (3) | C14—C12—C11—C10 | −171.1 (3) |
| O1—Ni1—N1—C9 | 146.8 (3) | C15—N2—C14—O4 | 178.1 (4) |
| O1i—Ni1—N1—C9 | −33.2 (3) | C17—N2—C14—O4 | −3.2 (6) |
| O5—Ni1—N1—C9 | 54.0 (3) | C15—N2—C14—C12 | −4.0 (6) |
| O5i—Ni1—N1—C9 | −126.0 (3) | C17—N2—C14—C12 | 174.7 (3) |
| O1—Ni1—N1—C13 | −31.7 (2) | C13—C12—C14—O4 | −57.3 (5) |
| O1i—Ni1—N1—C13 | 148.3 (2) | C11—C12—C14—O4 | 114.3 (4) |
| O5—Ni1—N1—C13 | −124.5 (3) | C13—C12—C14—N2 | 124.7 (4) |
| O5i—Ni1—N1—C13 | 55.5 (3) | C11—C12—C14—N2 | −63.7 (5) |
| Ni1—O1—C1—O2 | −26.2 (5) | C2—C3—C4—C5 | 0.1 (6) |
| Ni1—O1—C1—C2 | 152.2 (2) | C2—C7—C6—C5 | 0.7 (5) |
| C9—N1—C13—C12 | −2.3 (5) | C12—C11—C10—C9 | −1.6 (5) |
| Ni1—N1—C13—C12 | 176.3 (2) | N1—C9—C10—C11 | 0.8 (6) |
| C11—C12—C13—N1 | 1.6 (5) | C3—C4—C5—C6 | −1.0 (6) |
| C14—C12—C13—N1 | 173.7 (3) | C3—C4—C5—C8 | 179.0 (4) |
| C13—N1—C9—C10 | 1.1 (5) | C7—C6—C5—C4 | 0.7 (6) |
| Ni1—N1—C9—C10 | −177.5 (3) | C7—C6—C5—C8 | −179.4 (4) |
| C6—C7—C2—C3 | −1.6 (5) | C14—N2—C17—C18 | 78.7 (5) |
| C6—C7—C2—C1 | 179.0 (3) | C15—N2—C17—C18 | −102.4 (5) |
| O2—C1—C2—C3 | 3.7 (5) | C14—N2—C15—C16 | −110.3 (5) |
| O1—C1—C2—C3 | −174.9 (3) | C17—N2—C15—C16 | 71.0 (6) |
| O2—C1—C2—C7 | −177.0 (3) | C4—C5—C8—O3 | −175.0 (5) |
| O1—C1—C2—C7 | 4.5 (5) | C6—C5—C8—O3 | 5.1 (7) |
| H··· | ||||
| O5—H51···O4ii | 0.84 (2) | 1.97 (2) | 2.796 (4) | 170 (3) |
| O5—H52···O2 | 0.85 (3) | 1.81 (3) | 2.646 (4) | 168 (4) |
Selected bond lengths (Å)
| O5—Ni1 | 2.084 (2) |
| Ni1—O1 | 2.069 (2) |
| Ni1—N1 | 2.100 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O5—H51⋯O4i | 0.84 (2) | 1.97 (2) | 2.796 (4) | 170 (3) |
| O5—H52⋯O2 | 0.85 (3) | 1.81 (3) | 2.646 (4) | 168 (4) |
Symmetry code: (i) .