| Literature DB >> 21582108 |
F Elif Ozbek, Barış Tercan, Ertan Sahin, Hacali Necefoğlu, Tuncer Hökelek.
Abstract
The title complex, [Co(C(6)H(6)N(2)O)(2)(H(2)O)(4)](C(7)H(4)FO(2))(2), contains one Co(II) atom (site symmetry ), two monodentate nicotin-amide (NA) ligands, four coordinated water mol-ecules and two 2-fluoro-benzoate (FB) anions. The four O atoms in the equatorial plane around the Co atom form a slightly distorted square-planar arrangement, while the slightly distorted octa-hedral coordination is completed by the two N atoms of the NA ligands in the axial positions. The dihedral angle between the carboxyl group and the adjacent benzene ring is 29.8 (3)°, while the pyridine and benzene rings are oriented at a dihedral angle of 7.97 (12)°. In the crystal structure, mol-ecules are linked by O-H⋯O, N-H⋯O and N-H⋯F hydrogen bonds, forming an infinite three-dimensional network. π-π Contacts between the pyridine and benzene rings [centroid-centroid distance = 3.673 (3) Å] may further stabilize the crystal structure.Entities:
Year: 2009 PMID: 21582108 PMCID: PMC2968619 DOI: 10.1107/S1600536809006771
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Co(C6H6N2O)2(H2O)4](C7H4FO2)2 | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 4045 reflections | |
| θ = 2.9–26.4° | |
| µ = 0.70 mm−1 | |
| α = 82.160 (2)° | |
| β = 77.275 (3)° | Prism, pink |
| γ = 63.740 (3)° | 0.35 × 0.25 × 0.20 mm |
| Rigaku R-AXIS RAPID-S diffractometer | 2817 independent reflections |
| Radiation source: fine-focus sealed tube | 2679 reflections with |
| graphite | |
| ω scans | θmax = 26.4°, θmin = 2.9° |
| Absorption correction: multi-scan (Blessing, 1995) | |
| 14875 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 2817 reflections | (Δ/σ)max < 0.001 |
| 220 parameters | Δρmax = 1.37 e Å−3 |
| 10 restraints | Δρmin = −0.42 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Co1 | 0.5000 | 0.5000 | 0.5000 | 0.0306 (2) | |
| F1 | 0.6929 (4) | 0.9615 (4) | 0.85873 (18) | 0.0632 (7) | |
| O1 | 0.2777 (4) | 0.4281 (5) | 0.97121 (18) | 0.0544 (7) | |
| O2 | 0.9068 (4) | 0.8007 (4) | 0.68460 (17) | 0.0433 (6) | |
| O3 | 0.7033 (4) | 0.9537 (4) | 0.57755 (17) | 0.0414 (6) | |
| O4 | 0.6387 (4) | 0.7065 (4) | 0.46282 (17) | 0.0398 (6) | |
| H41 | 0.695 (6) | 0.741 (6) | 0.504 (3) | 0.057 (13)* | |
| H42 | 0.529 (7) | 0.818 (6) | 0.449 (4) | 0.10 (2)* | |
| O5 | 0.7856 (4) | 0.2570 (4) | 0.46679 (18) | 0.0450 (6) | |
| H51 | 0.896 (5) | 0.227 (7) | 0.419 (3) | 0.070 (15)* | |
| H52 | 0.799 (7) | 0.140 (5) | 0.499 (3) | 0.053 (12)* | |
| N1 | 0.5506 (4) | 0.4540 (4) | 0.64340 (18) | 0.0334 (6) | |
| N2 | 0.0471 (5) | 0.5743 (5) | 0.8720 (2) | 0.0460 (8) | |
| H21 | −0.056 (5) | 0.588 (6) | 0.918 (2) | 0.047 (11)* | |
| H22 | 0.019 (6) | 0.640 (5) | 0.819 (2) | 0.041 (10)* | |
| C1 | 0.3949 (5) | 0.4742 (5) | 0.7168 (2) | 0.0337 (7) | |
| H1 | 0.2679 | 0.4926 | 0.7042 | 0.040* | |
| C2 | 0.4139 (5) | 0.4691 (5) | 0.8104 (2) | 0.0348 (7) | |
| C3 | 0.6044 (6) | 0.4392 (5) | 0.8293 (2) | 0.0393 (8) | |
| H3 | 0.6229 | 0.4340 | 0.8913 | 0.047* | |
| C4 | 0.7650 (5) | 0.4175 (5) | 0.7546 (3) | 0.0408 (8) | |
| H4 | 0.8937 | 0.3981 | 0.7654 | 0.049* | |
| C5 | 0.7332 (5) | 0.4248 (5) | 0.6634 (2) | 0.0380 (7) | |
| H5 | 0.8434 | 0.4089 | 0.6135 | 0.046* | |
| C6 | 0.2384 (6) | 0.4906 (6) | 0.8914 (2) | 0.0393 (8) | |
| C7 | 0.7326 (5) | 0.8934 (5) | 0.6617 (2) | 0.0326 (7) | |
| C8 | 0.5407 (5) | 0.9340 (5) | 0.7363 (2) | 0.0330 (7) | |
| C9 | 0.3610 (5) | 0.9450 (5) | 0.7114 (3) | 0.0381 (7) | |
| H9 | 0.3613 | 0.9304 | 0.6486 | 0.046* | |
| C10 | 0.1833 (6) | 0.9768 (6) | 0.7779 (3) | 0.0474 (9) | |
| H10 | 0.0663 | 0.9813 | 0.7601 | 0.057* | |
| C11 | 0.1798 (7) | 1.0021 (7) | 0.8708 (3) | 0.0572 (11) | |
| H11 | 0.0593 | 1.0261 | 0.9155 | 0.069* | |
| C12 | 0.3539 (7) | 0.9920 (7) | 0.8980 (3) | 0.0544 (10) | |
| H12 | 0.3526 | 1.0070 | 0.9609 | 0.065* | |
| C13 | 0.5296 (6) | 0.9593 (6) | 0.8305 (2) | 0.0411 (8) |
| Co1 | 0.0292 (3) | 0.0361 (4) | 0.0231 (3) | −0.0124 (3) | −0.0019 (2) | −0.0010 (2) |
| F1 | 0.0543 (14) | 0.0868 (19) | 0.0507 (14) | −0.0276 (14) | −0.0144 (11) | −0.0109 (13) |
| O1 | 0.0510 (16) | 0.084 (2) | 0.0263 (13) | −0.0306 (15) | −0.0069 (11) | 0.0080 (13) |
| O2 | 0.0319 (12) | 0.0595 (16) | 0.0341 (13) | −0.0166 (11) | −0.0066 (10) | 0.0025 (11) |
| O3 | 0.0418 (13) | 0.0504 (14) | 0.0300 (12) | −0.0196 (11) | −0.0077 (10) | 0.0065 (10) |
| O4 | 0.0449 (14) | 0.0440 (14) | 0.0350 (13) | −0.0226 (12) | −0.0102 (11) | 0.0017 (10) |
| O5 | 0.0385 (14) | 0.0435 (14) | 0.0371 (14) | −0.0100 (11) | 0.0063 (11) | 0.0005 (11) |
| N1 | 0.0340 (14) | 0.0389 (15) | 0.0252 (13) | −0.0145 (12) | −0.0041 (10) | −0.0003 (11) |
| N2 | 0.0397 (17) | 0.063 (2) | 0.0298 (16) | −0.0209 (15) | −0.0032 (13) | 0.0059 (14) |
| C1 | 0.0331 (16) | 0.0400 (17) | 0.0272 (15) | −0.0151 (14) | −0.0060 (12) | −0.0001 (13) |
| C2 | 0.0388 (17) | 0.0374 (17) | 0.0269 (15) | −0.0161 (14) | −0.0057 (13) | 0.0014 (13) |
| C3 | 0.0453 (19) | 0.0452 (19) | 0.0297 (16) | −0.0196 (16) | −0.0137 (14) | 0.0028 (14) |
| C4 | 0.0348 (17) | 0.047 (2) | 0.0424 (19) | −0.0175 (15) | −0.0128 (14) | 0.0020 (15) |
| C5 | 0.0325 (16) | 0.0429 (18) | 0.0353 (17) | −0.0147 (14) | −0.0032 (13) | −0.0005 (14) |
| C6 | 0.048 (2) | 0.048 (2) | 0.0246 (16) | −0.0241 (17) | −0.0045 (14) | 0.0009 (14) |
| C7 | 0.0362 (17) | 0.0342 (16) | 0.0306 (16) | −0.0177 (14) | −0.0068 (13) | −0.0004 (12) |
| C8 | 0.0335 (16) | 0.0317 (16) | 0.0322 (16) | −0.0137 (13) | −0.0052 (13) | 0.0012 (12) |
| C9 | 0.0386 (18) | 0.0392 (18) | 0.0396 (18) | −0.0188 (15) | −0.0092 (14) | 0.0000 (14) |
| C10 | 0.0323 (18) | 0.050 (2) | 0.060 (2) | −0.0193 (16) | −0.0063 (16) | 0.0021 (18) |
| C11 | 0.042 (2) | 0.068 (3) | 0.052 (2) | −0.022 (2) | 0.0101 (18) | −0.008 (2) |
| C12 | 0.051 (2) | 0.070 (3) | 0.035 (2) | −0.022 (2) | 0.0032 (17) | −0.0094 (18) |
| C13 | 0.0383 (18) | 0.047 (2) | 0.0354 (18) | −0.0158 (16) | −0.0067 (14) | −0.0024 (15) |
| Co1—O4i | 2.143 (3) | C2—C1 | 1.387 (4) |
| Co1—O4 | 2.143 (3) | C2—C3 | 1.390 (5) |
| Co1—O5i | 2.075 (3) | C3—H3 | 0.9300 |
| Co1—O5 | 2.075 (3) | C4—C3 | 1.375 (5) |
| Co1—N1 | 2.145 (3) | C4—H4 | 0.9300 |
| Co1—N1i | 2.145 (3) | C5—C4 | 1.381 (5) |
| F1—C13 | 1.348 (4) | C5—H5 | 0.9300 |
| O1—C6 | 1.232 (4) | C6—C2 | 1.499 (5) |
| O2—C7 | 1.244 (4) | C7—C8 | 1.505 (5) |
| O3—C7 | 1.270 (4) | C8—C9 | 1.399 (5) |
| O4—H41 | 0.91 (5) | C8—C13 | 1.384 (5) |
| O4—H42 | 0.90 (3) | C9—C10 | 1.379 (5) |
| O5—H51 | 0.90 (4) | C9—H9 | 0.9300 |
| O5—H52 | 0.91 (2) | C10—H10 | 0.9300 |
| N1—C1 | 1.342 (4) | C11—C10 | 1.377 (6) |
| N1—C5 | 1.342 (4) | C11—H11 | 0.9300 |
| N2—C6 | 1.330 (5) | C12—C11 | 1.378 (6) |
| N2—H21 | 0.87 (2) | C12—C13 | 1.376 (5) |
| N2—H22 | 0.87 (2) | C12—H12 | 0.9300 |
| C1—H1 | 0.9300 | ||
| O4i—Co1—O4 | 180.0 | C2—C3—H3 | 120.6 |
| O4i—Co1—N1 | 86.31 (10) | C4—C3—C2 | 118.7 (3) |
| O4—Co1—N1 | 93.69 (10) | C4—C3—H3 | 120.6 |
| O4i—Co1—N1i | 93.69 (10) | C3—C4—C5 | 119.3 (3) |
| O4—Co1—N1i | 86.31 (10) | C3—C4—H4 | 120.3 |
| O5i—Co1—O4i | 91.75 (12) | C5—C4—H4 | 120.3 |
| O5—Co1—O4i | 88.25 (12) | N1—C5—C4 | 123.0 (3) |
| O5i—Co1—O4 | 88.25 (12) | N1—C5—H5 | 118.5 |
| O5—Co1—O4 | 91.75 (12) | C4—C5—H5 | 118.5 |
| O5i—Co1—O5 | 180.0 | O1—C6—N2 | 123.5 (3) |
| O5i—Co1—N1 | 92.59 (11) | O1—C6—C2 | 119.1 (3) |
| O5—Co1—N1 | 87.41 (11) | N2—C6—C2 | 117.3 (3) |
| O5i—Co1—N1i | 87.41 (11) | O2—C7—O3 | 124.3 (3) |
| O5—Co1—N1i | 92.59 (11) | O2—C7—C8 | 119.3 (3) |
| N1—Co1—N1i | 180.000 (1) | O3—C7—C8 | 116.3 (3) |
| Co1—O4—H41 | 124 (3) | C9—C8—C7 | 119.6 (3) |
| Co1—O4—H42 | 101 (4) | C13—C8—C7 | 123.9 (3) |
| H41—O4—H42 | 106 (3) | C13—C8—C9 | 116.5 (3) |
| Co1—O5—H51 | 136 (3) | C8—C9—H9 | 119.2 |
| Co1—O5—H52 | 116 (3) | C10—C9—C8 | 121.5 (3) |
| H51—O5—H52 | 107 (3) | C10—C9—H9 | 119.2 |
| C1—N1—Co1 | 121.3 (2) | C9—C10—H10 | 120.1 |
| C5—N1—C1 | 117.3 (3) | C11—C10—C9 | 119.7 (4) |
| C5—N1—Co1 | 121.1 (2) | C11—C10—H10 | 120.1 |
| C6—N2—H21 | 118 (3) | C10—C11—C12 | 120.4 (4) |
| C6—N2—H22 | 122 (3) | C10—C11—H11 | 119.8 |
| H21—N2—H22 | 118 (4) | C12—C11—H11 | 119.8 |
| N1—C1—C2 | 123.3 (3) | C11—C12—H12 | 120.6 |
| N1—C1—H1 | 118.3 | C13—C12—C11 | 118.8 (4) |
| C2—C1—H1 | 118.3 | C13—C12—H12 | 120.6 |
| C1—C2—C3 | 118.4 (3) | F1—C13—C12 | 117.1 (3) |
| C1—C2—C6 | 122.5 (3) | F1—C13—C8 | 119.8 (3) |
| C3—C2—C6 | 119.1 (3) | C12—C13—C8 | 123.0 (4) |
| O4i—Co1—N1—C1 | −51.9 (3) | O1—C6—C2—C3 | −19.9 (5) |
| O4—Co1—N1—C1 | 128.1 (3) | N2—C6—C2—C1 | −20.0 (5) |
| O4i—Co1—N1—C5 | 135.3 (3) | N2—C6—C2—C3 | 161.2 (3) |
| O4—Co1—N1—C5 | −44.7 (3) | O2—C7—C8—C9 | −149.0 (3) |
| O5i—Co1—N1—C1 | 39.7 (3) | O2—C7—C8—C13 | 30.0 (5) |
| O5—Co1—N1—C1 | −140.3 (3) | O3—C7—C8—C9 | 29.2 (4) |
| O5i—Co1—N1—C5 | −133.1 (3) | O3—C7—C8—C13 | −151.7 (3) |
| O5—Co1—N1—C5 | 46.9 (3) | C7—C8—C9—C10 | 178.3 (3) |
| Co1—N1—C1—C2 | −172.2 (3) | C13—C8—C9—C10 | −0.8 (5) |
| C5—N1—C1—C2 | 0.9 (5) | C7—C8—C13—F1 | 4.5 (5) |
| Co1—N1—C5—C4 | 172.4 (3) | C7—C8—C13—C12 | −178.5 (4) |
| C1—N1—C5—C4 | −0.8 (5) | C9—C8—C13—F1 | −176.4 (3) |
| C3—C2—C1—N1 | −0.8 (5) | C9—C8—C13—C12 | 0.5 (6) |
| C6—C2—C1—N1 | −179.5 (3) | C8—C9—C10—C11 | 1.1 (6) |
| C1—C2—C3—C4 | 0.5 (5) | C12—C11—C10—C9 | −1.2 (7) |
| C6—C2—C3—C4 | 179.3 (3) | C11—C12—C13—F1 | 176.4 (4) |
| C5—C4—C3—C2 | −0.4 (5) | C11—C12—C13—C8 | −0.6 (7) |
| N1—C5—C4—C3 | 0.5 (6) | C13—C12—C11—C10 | 1.0 (7) |
| O1—C6—C2—C1 | 158.9 (4) |
| H··· | ||||
| N2—H21···O1ii | 0.87 (2) | 2.04 (3) | 2.902 (5) | 171 (4) |
| N2—H22···F1iii | 0.87 (2) | 2.54 (4) | 2.916 (5) | 107 (2) |
| N2—H22···O2iii | 0.87 (2) | 2.26 (3) | 3.116 (5) | 172 (4) |
| O4—H41···O3 | 0.91 (5) | 2.06 (4) | 2.885 (4) | 151 (4) |
| O4—H42···O3iv | 0.90 (3) | 1.86 (5) | 2.761 (4) | 178 (5) |
| O5—H51···O2v | 0.90 (4) | 1.80 (4) | 2.695 (4) | 172 (4) |
| O5—H52···O3vi | 0.91 (2) | 1.95 (4) | 2.798 (4) | 156 (4) |
| Co1—O4 | 2.143 (3) |
| Co1—O5 | 2.075 (3) |
| Co1—N1 | 2.145 (3) |
| O4—Co1—N1 | 93.69 (10) |
| O4—Co1—N1i | 86.31 (10) |
| O5i—Co1—N1 | 92.59 (11) |
| O5—Co1—N1 | 87.41 (11) |
Symmetry code: (i) .
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H21⋯O1ii | 0.87 (2) | 2.04 (3) | 2.902 (5) | 171 (4) |
| N2—H22⋯F1iii | 0.87 (2) | 2.54 (4) | 2.916 (5) | 107 (2) |
| N2—H22⋯O2iii | 0.87 (2) | 2.26 (3) | 3.116 (5) | 172 (4) |
| O4—H41⋯O3 | 0.91 (5) | 2.06 (4) | 2.885 (4) | 151 (4) |
| O4—H42⋯O3iv | 0.90 (3) | 1.86 (5) | 2.761 (4) | 178 (5) |
| O5—H51⋯O2v | 0.90 (4) | 1.80 (4) | 2.695 (4) | 172 (4) |
| O5—H52⋯O3vi | 0.91 (2) | 1.95 (4) | 2.798 (4) | 156 (4) |
Symmetry codes: (ii) ; (iii) ; (iv) ; (v) ; (vi) .