| Literature DB >> 21579772 |
Fahimeh Sabbaghi, Mehrdad Pourayoubi, Maryam Toghraee, Vladimir Divjakovic.
Abstract
The P atom in the title compound, C(19)H(29)N(4)O(4)P, exhibits a tetra-hedral coordination and the phosphoryl and carbonyl groups are anti to each other. Adjacent mol-ecules are linked by N-H⋯O hydrogen bonds to form a layer motif.Entities:
Year: 2010 PMID: 21579772 PMCID: PMC2979854 DOI: 10.1107/S1600536810000851
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C19H29N4O4P | |
| Triclinic, | |
| Hall symbol: -P 1 | Mo |
| Cell parameters from 4113 reflections | |
| θ = 3.3–29.2° | |
| µ = 0.16 mm−1 | |
| α = 99.764 (7)° | |
| β = 110.881 (7)° | Prism, colorles |
| γ = 108.158 (7)° | 0.52 × 0.31 × 0.28 mm |
| Oxford Diffraction Xcalibur diffractometer with a Sapphire3 (Gemini Mo) detector | 2915 reflections with |
| Radiation source: Enhance (Mo) X-ray Source | |
| graphite | θmax = 25.0°, θmin = 3.3° |
| Detector resolution: 16.3280 pixels mm-1 | |
| ω scans | |
| 6746 measured reflections | |
| 3713 independent reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max = 0.001 | |
| 3713 reflections | Δρmax = 0.38 e Å−3 |
| 254 parameters | Δρmin = −0.37 e Å−3 |
| 0 restraints | Extinction correction: |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.015 (3) |
| Experimental. #__ type_ start__ end____ width___ exp.time_ 1 omega -7.00 53.00 1.0000 3.6500 omega____ theta____ kappa____ phi______ frames - 21.1985 77.0000 150.0000 60#__ type_ start__ end____ width___ exp.time_ 2 omega -4.00 91.00 1.0000 3.6500 omega____ theta____ kappa____ phi______ frames - 21.1985 77.0000 30.0000 95#__ type_ start__ end____ width___ exp.time_ 3 omega -51.00 47.00 1.0000 3.6500 omega____ theta____ kappa____ phi______ frames - 21.1985 - 37.0000 240.0000 98#__ type_ start__ end____ width___ exp.time_ 4 omega -51.00 34.00 1.0000 3.6500 omega____ theta____ kappa____ phi______ frames - 21.1985 - 37.0000 150.0000 85#__ type_ start__ end____ width___ exp.time_ 5 omega -6.00 33.00 1.0000 3.6500 omega____ theta____ kappa____ phi______ frames - 21.1985 77.0000 270.0000 39 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| P | 0.69819 (5) | 0.43097 (5) | 0.04401 (5) | 0.03153 (17) | |
| O1 | 0.59696 (13) | 0.43337 (14) | 0.10845 (13) | 0.0427 (3) | |
| O2 | 0.86256 (14) | 0.52969 (15) | −0.11240 (13) | 0.0494 (4) | |
| O3 | 0.6421 (2) | 0.7685 (2) | −0.64611 (17) | 0.0824 (6) | |
| O4 | 0.4469 (2) | 0.7627 (2) | −0.62270 (19) | 0.0973 (7) | |
| N1 | 0.67651 (16) | 0.28654 (15) | −0.04742 (16) | 0.0416 (4) | |
| H1 | 0.6103 | 0.2583 | −0.1305 | 0.050* | |
| N2 | 0.87293 (15) | 0.49971 (15) | 0.15558 (14) | 0.0337 (4) | |
| H2 | 0.9336 | 0.4661 | 0.1431 | 0.040* | |
| N3 | 0.66090 (15) | 0.51363 (15) | −0.07230 (14) | 0.0329 (4) | |
| H3 | 0.5844 | 0.5345 | −0.0898 | 0.039* | |
| N4 | 0.5646 (2) | 0.74999 (18) | −0.58613 (18) | 0.0558 (5) | |
| C11 | 0.7533 (2) | 0.19656 (18) | −0.00942 (18) | 0.0385 (4) | |
| H11 | 0.8616 | 0.2500 | 0.0263 | 0.046* | |
| C12 | 0.7254 (3) | 0.1419 (2) | 0.0981 (2) | 0.0670 (7) | |
| H12A | 0.6181 | 0.0940 | 0.0675 | 0.080* | |
| H12B | 0.7635 | 0.2172 | 0.1799 | 0.080* | |
| C13 | 0.8027 (4) | 0.0438 (3) | 0.1304 (3) | 0.0905 (10) | |
| H13A | 0.9108 | 0.0945 | 0.1720 | 0.109* | |
| H13B | 0.7765 | 0.0044 | 0.1949 | 0.109* | |
| C14 | 0.7562 (3) | −0.0698 (2) | 0.0036 (3) | 0.0779 (8) | |
| H14A | 0.8118 | −0.1262 | 0.0263 | 0.093* | |
| H14B | 0.6500 | −0.1271 | −0.0324 | 0.093* | |
| C15 | 0.7858 (3) | −0.0128 (3) | −0.1009 (3) | 0.0711 (7) | |
| H15A | 0.7513 | −0.0870 | −0.1825 | 0.085* | |
| H15B | 0.8931 | 0.0377 | −0.0678 | 0.085* | |
| C16 | 0.7059 (3) | 0.0814 (2) | −0.1346 (2) | 0.0537 (6) | |
| H16A | 0.7290 | 0.1189 | −0.2012 | 0.064* | |
| H16B | 0.5981 | 0.0292 | −0.1739 | 0.064* | |
| C21 | 0.9318 (2) | 0.61724 (18) | 0.27734 (18) | 0.0372 (4) | |
| H21 | 0.8543 | 0.6058 | 0.3101 | 0.045* | |
| C22 | 0.9661 (3) | 0.7503 (2) | 0.2469 (2) | 0.0772 (8) | |
| H22A | 0.8738 | 0.7497 | 0.1823 | 0.093* | |
| H22B | 1.0344 | 0.7586 | 0.2051 | 0.093* | |
| C23 | 1.0354 (4) | 0.8726 (3) | 0.3722 (3) | 0.0995 (10) | |
| H23A | 1.0617 | 0.9557 | 0.3479 | 0.119* | |
| H23B | 0.9625 | 0.8708 | 0.4078 | 0.119* | |
| C24 | 1.1732 (3) | 0.8739 (3) | 0.4796 (3) | 0.0952 (11) | |
| H24A | 1.2118 | 0.9505 | 0.5605 | 0.114* | |
| H24B | 1.2503 | 0.8853 | 0.4477 | 0.114* | |
| C25 | 1.1371 (3) | 0.7418 (3) | 0.5140 (2) | 0.0760 (8) | |
| H25A | 1.0672 | 0.7350 | 0.5540 | 0.091* | |
| H25B | 1.2284 | 0.7426 | 0.5803 | 0.091* | |
| C26 | 1.0679 (2) | 0.6172 (2) | 0.3871 (2) | 0.0556 (6) | |
| H26A | 1.1422 | 0.6182 | 0.3533 | 0.067* | |
| H26B | 1.0395 | 0.5342 | 0.4110 | 0.067* | |
| C30 | 0.74698 (18) | 0.54829 (18) | −0.13909 (17) | 0.0333 (4) | |
| C31 | 0.69513 (18) | 0.60806 (17) | −0.25097 (17) | 0.0314 (4) | |
| C32 | 0.79254 (19) | 0.65206 (19) | −0.30874 (19) | 0.0399 (5) | |
| H32 | 0.8865 | 0.6487 | −0.2739 | 0.048* | |
| C33 | 0.7513 (2) | 0.7005 (2) | −0.41680 (19) | 0.0434 (5) | |
| H33 | 0.8163 | 0.7296 | −0.4556 | 0.052* | |
| C34 | 0.6122 (2) | 0.70486 (19) | −0.46623 (17) | 0.0396 (5) | |
| C35 | 0.5142 (2) | 0.6639 (2) | −0.41019 (19) | 0.0426 (5) | |
| H35 | 0.4210 | 0.6688 | −0.4449 | 0.051* | |
| C36 | 0.55611 (19) | 0.61538 (19) | −0.30166 (18) | 0.0387 (4) | |
| H36 | 0.4911 | 0.5876 | −0.2625 | 0.046* |
| P | 0.0300 (3) | 0.0420 (3) | 0.0339 (3) | 0.0222 (2) | 0.0166 (2) | 0.0181 (2) |
| O1 | 0.0394 (7) | 0.0653 (9) | 0.0482 (8) | 0.0331 (6) | 0.0286 (6) | 0.0328 (7) |
| O2 | 0.0414 (7) | 0.0855 (11) | 0.0506 (8) | 0.0435 (7) | 0.0294 (7) | 0.0358 (8) |
| O3 | 0.0942 (13) | 0.1094 (15) | 0.0620 (11) | 0.0376 (11) | 0.0452 (11) | 0.0528 (11) |
| O4 | 0.0850 (13) | 0.159 (2) | 0.0865 (13) | 0.0732 (13) | 0.0370 (11) | 0.0858 (14) |
| N1 | 0.0420 (8) | 0.0447 (9) | 0.0346 (8) | 0.0248 (7) | 0.0071 (7) | 0.0117 (7) |
| N2 | 0.0320 (8) | 0.0443 (9) | 0.0326 (8) | 0.0249 (7) | 0.0149 (7) | 0.0108 (7) |
| N3 | 0.0298 (7) | 0.0472 (9) | 0.0370 (8) | 0.0261 (7) | 0.0186 (7) | 0.0207 (7) |
| N4 | 0.0583 (11) | 0.0567 (12) | 0.0434 (10) | 0.0178 (9) | 0.0139 (9) | 0.0231 (9) |
| C11 | 0.0371 (9) | 0.0358 (10) | 0.0421 (10) | 0.0194 (8) | 0.0116 (9) | 0.0146 (9) |
| C12 | 0.1058 (19) | 0.0580 (14) | 0.0472 (13) | 0.0402 (14) | 0.0349 (13) | 0.0232 (12) |
| C13 | 0.140 (3) | 0.0675 (17) | 0.0624 (16) | 0.0553 (17) | 0.0237 (17) | 0.0380 (15) |
| C14 | 0.0989 (19) | 0.0490 (14) | 0.0778 (17) | 0.0416 (14) | 0.0189 (16) | 0.0225 (14) |
| C15 | 0.0883 (18) | 0.0575 (15) | 0.0794 (17) | 0.0467 (14) | 0.0356 (15) | 0.0188 (14) |
| C16 | 0.0703 (14) | 0.0544 (13) | 0.0483 (12) | 0.0356 (11) | 0.0280 (11) | 0.0199 (11) |
| C21 | 0.0390 (10) | 0.0445 (11) | 0.0358 (10) | 0.0222 (8) | 0.0204 (8) | 0.0114 (9) |
| C22 | 0.115 (2) | 0.0475 (14) | 0.0572 (15) | 0.0301 (14) | 0.0266 (15) | 0.0183 (12) |
| C23 | 0.140 (3) | 0.0415 (15) | 0.088 (2) | 0.0229 (16) | 0.036 (2) | 0.0070 (15) |
| C24 | 0.090 (2) | 0.069 (2) | 0.083 (2) | −0.0029 (16) | 0.0424 (18) | −0.0226 (17) |
| C25 | 0.0643 (15) | 0.105 (2) | 0.0405 (13) | 0.0401 (15) | 0.0111 (12) | −0.0041 (14) |
| C26 | 0.0570 (13) | 0.0683 (15) | 0.0364 (11) | 0.0329 (11) | 0.0125 (10) | 0.0075 (11) |
| C30 | 0.0309 (9) | 0.0421 (10) | 0.0314 (9) | 0.0196 (8) | 0.0145 (8) | 0.0107 (8) |
| C31 | 0.0305 (9) | 0.0338 (9) | 0.0306 (9) | 0.0141 (7) | 0.0142 (8) | 0.0081 (8) |
| C32 | 0.0320 (9) | 0.0478 (11) | 0.0426 (11) | 0.0169 (8) | 0.0175 (8) | 0.0168 (9) |
| C33 | 0.0419 (10) | 0.0517 (12) | 0.0413 (11) | 0.0162 (9) | 0.0235 (9) | 0.0187 (10) |
| C34 | 0.0466 (11) | 0.0377 (10) | 0.0287 (9) | 0.0137 (8) | 0.0124 (9) | 0.0120 (8) |
| C35 | 0.0360 (10) | 0.0548 (12) | 0.0412 (11) | 0.0238 (9) | 0.0141 (9) | 0.0209 (10) |
| C36 | 0.0351 (9) | 0.0524 (12) | 0.0390 (10) | 0.0224 (9) | 0.0204 (9) | 0.0205 (9) |
| P—O1 | 1.4739 (13) | C16—H16B | 0.9700 |
| P—N1 | 1.6174 (16) | C21—C22 | 1.502 (3) |
| P—N2 | 1.6233 (14) | C21—C26 | 1.505 (3) |
| P—N3 | 1.6966 (14) | C21—H21 | 0.9800 |
| O2—C30 | 1.222 (2) | C22—C23 | 1.510 (3) |
| O3—N4 | 1.210 (2) | C22—H22A | 0.9700 |
| O4—N4 | 1.206 (2) | C22—H22B | 0.9700 |
| N1—C11 | 1.468 (2) | C23—C24 | 1.498 (4) |
| N1—H1 | 0.8600 | C23—H23A | 0.9700 |
| N2—C21 | 1.473 (2) | C23—H23B | 0.9700 |
| N2—H2 | 0.8600 | C24—C25 | 1.514 (4) |
| N3—C30 | 1.362 (2) | C24—H24A | 0.9700 |
| N3—H3 | 0.8600 | C24—H24B | 0.9700 |
| N4—C34 | 1.471 (2) | C25—C26 | 1.536 (3) |
| C11—C12 | 1.498 (3) | C25—H25A | 0.9700 |
| C11—C16 | 1.509 (3) | C25—H25B | 0.9700 |
| C11—H11 | 0.9800 | C26—H26A | 0.9700 |
| C12—C13 | 1.538 (3) | C26—H26B | 0.9700 |
| C12—H12A | 0.9700 | C30—C31 | 1.507 (2) |
| C12—H12B | 0.9700 | C31—C36 | 1.387 (2) |
| C13—C14 | 1.514 (4) | C31—C32 | 1.391 (2) |
| C13—H13A | 0.9700 | C32—C33 | 1.374 (3) |
| C13—H13B | 0.9700 | C32—H32 | 0.9300 |
| C14—C15 | 1.485 (4) | C33—C34 | 1.373 (3) |
| C14—H14A | 0.9700 | C33—H33 | 0.9300 |
| C14—H14B | 0.9700 | C34—C35 | 1.375 (3) |
| C15—C16 | 1.521 (3) | C35—C36 | 1.380 (3) |
| C15—H15A | 0.9700 | C35—H35 | 0.9300 |
| C15—H15B | 0.9700 | C36—H36 | 0.9300 |
| C16—H16A | 0.9700 | ||
| O1—P—N1 | 119.46 (8) | C22—C21—C26 | 111.50 (17) |
| O1—P—N2 | 111.42 (7) | N2—C21—H21 | 107.9 |
| N1—P—N2 | 105.05 (8) | C22—C21—H21 | 107.9 |
| O1—P—N3 | 105.89 (7) | C26—C21—H21 | 107.9 |
| N1—P—N3 | 101.89 (8) | C21—C22—C23 | 112.7 (2) |
| N2—P—N3 | 112.93 (7) | C21—C22—H22A | 109.0 |
| C11—N1—P | 129.49 (13) | C23—C22—H22A | 109.0 |
| C11—N1—H1 | 115.3 | C21—C22—H22B | 109.0 |
| P—N1—H1 | 115.3 | C23—C22—H22B | 109.0 |
| C21—N2—P | 122.67 (11) | H22A—C22—H22B | 107.8 |
| C21—N2—H2 | 118.7 | C24—C23—C22 | 111.5 (3) |
| P—N2—H2 | 118.7 | C24—C23—H23A | 109.3 |
| C30—N3—P | 122.74 (11) | C22—C23—H23A | 109.3 |
| C30—N3—H3 | 118.6 | C24—C23—H23B | 109.3 |
| P—N3—H3 | 118.6 | C22—C23—H23B | 109.3 |
| O4—N4—O3 | 122.9 (2) | H23A—C23—H23B | 108.0 |
| O4—N4—C34 | 118.1 (2) | C23—C24—C25 | 110.5 (2) |
| O3—N4—C34 | 118.90 (19) | C23—C24—H24A | 109.6 |
| N1—C11—C12 | 112.89 (17) | C25—C24—H24A | 109.6 |
| N1—C11—C16 | 109.24 (15) | C23—C24—H24B | 109.6 |
| C12—C11—C16 | 110.75 (16) | C25—C24—H24B | 109.6 |
| N1—C11—H11 | 107.9 | H24A—C24—H24B | 108.1 |
| C12—C11—H11 | 107.9 | C24—C25—C26 | 111.3 (2) |
| C16—C11—H11 | 107.9 | C24—C25—H25A | 109.4 |
| C11—C12—C13 | 111.0 (2) | C26—C25—H25A | 109.4 |
| C11—C12—H12A | 109.4 | C24—C25—H25B | 109.4 |
| C13—C12—H12A | 109.4 | C26—C25—H25B | 109.4 |
| C11—C12—H12B | 109.4 | H25A—C25—H25B | 108.0 |
| C13—C12—H12B | 109.4 | C21—C26—C25 | 111.20 (18) |
| H12A—C12—H12B | 108.0 | C21—C26—H26A | 109.4 |
| C14—C13—C12 | 111.5 (2) | C25—C26—H26A | 109.4 |
| C14—C13—H13A | 109.3 | C21—C26—H26B | 109.4 |
| C12—C13—H13A | 109.3 | C25—C26—H26B | 109.4 |
| C14—C13—H13B | 109.3 | H26A—C26—H26B | 108.0 |
| C12—C13—H13B | 109.3 | O2—C30—N3 | 121.79 (16) |
| H13A—C13—H13B | 108.0 | O2—C30—C31 | 119.65 (16) |
| C15—C14—C13 | 110.7 (2) | N3—C30—C31 | 118.55 (14) |
| C15—C14—H14A | 109.5 | C36—C31—C32 | 119.53 (17) |
| C13—C14—H14A | 109.5 | C36—C31—C30 | 123.97 (16) |
| C15—C14—H14B | 109.5 | C32—C31—C30 | 116.44 (15) |
| C13—C14—H14B | 109.5 | C33—C32—C31 | 120.64 (17) |
| H14A—C14—H14B | 108.1 | C33—C32—H32 | 119.7 |
| C14—C15—C16 | 111.0 (2) | C31—C32—H32 | 119.7 |
| C14—C15—H15A | 109.4 | C34—C33—C32 | 118.64 (18) |
| C16—C15—H15A | 109.4 | C34—C33—H33 | 120.7 |
| C14—C15—H15B | 109.4 | C32—C33—H33 | 120.7 |
| C16—C15—H15B | 109.4 | C33—C34—C35 | 122.12 (17) |
| H15A—C15—H15B | 108.0 | C33—C34—N4 | 118.82 (18) |
| C11—C16—C15 | 111.21 (18) | C35—C34—N4 | 119.03 (17) |
| C11—C16—H16A | 109.4 | C34—C35—C36 | 119.04 (17) |
| C15—C16—H16A | 109.4 | C34—C35—H35 | 120.5 |
| C11—C16—H16B | 109.4 | C36—C35—H35 | 120.5 |
| C15—C16—H16B | 109.4 | C35—C36—C31 | 120.01 (17) |
| H16A—C16—H16B | 108.0 | C35—C36—H36 | 120.0 |
| N2—C21—C22 | 112.00 (16) | C31—C36—H36 | 120.0 |
| N2—C21—C26 | 109.51 (15) | ||
| O1—P—N1—C11 | −95.68 (17) | C23—C24—C25—C26 | 56.3 (3) |
| N2—P—N1—C11 | 30.22 (19) | N2—C21—C26—C25 | 177.50 (18) |
| N3—P—N1—C11 | 148.19 (16) | C22—C21—C26—C25 | 53.0 (3) |
| O1—P—N2—C21 | −35.25 (16) | C24—C25—C26—C21 | −55.1 (3) |
| N1—P—N2—C21 | −166.00 (13) | P—N3—C30—O2 | −4.9 (2) |
| N3—P—N2—C21 | 83.79 (15) | P—N3—C30—C31 | 173.61 (12) |
| O1—P—N3—C30 | 170.69 (13) | O2—C30—C31—C36 | 170.60 (17) |
| N1—P—N3—C30 | −63.67 (15) | N3—C30—C31—C36 | −8.0 (3) |
| N2—P—N3—C30 | 48.50 (15) | O2—C30—C31—C32 | −6.5 (2) |
| P—N1—C11—C12 | 62.5 (2) | N3—C30—C31—C32 | 174.97 (15) |
| P—N1—C11—C16 | −173.78 (14) | C36—C31—C32—C33 | −1.1 (3) |
| N1—C11—C12—C13 | 177.69 (19) | C30—C31—C32—C33 | 176.11 (16) |
| C16—C11—C12—C13 | 54.8 (3) | C31—C32—C33—C34 | 0.2 (3) |
| C11—C12—C13—C14 | −54.6 (3) | C32—C33—C34—C35 | 0.7 (3) |
| C12—C13—C14—C15 | 55.3 (3) | C32—C33—C34—N4 | −176.94 (17) |
| C13—C14—C15—C16 | −56.7 (3) | O4—N4—C34—C33 | −174.8 (2) |
| N1—C11—C16—C15 | 178.52 (19) | O3—N4—C34—C33 | 7.5 (3) |
| C12—C11—C16—C15 | −56.5 (3) | O4—N4—C34—C35 | 7.5 (3) |
| C14—C15—C16—C11 | 57.7 (3) | O3—N4—C34—C35 | −170.23 (19) |
| P—N2—C21—C22 | −81.3 (2) | C33—C34—C35—C36 | −0.7 (3) |
| P—N2—C21—C26 | 154.44 (15) | N4—C34—C35—C36 | 176.95 (17) |
| N2—C21—C22—C23 | −176.5 (2) | C34—C35—C36—C31 | −0.2 (3) |
| C26—C21—C22—C23 | −53.4 (3) | C32—C31—C36—C35 | 1.1 (3) |
| C21—C22—C23—C24 | 55.0 (4) | C30—C31—C36—C35 | −175.88 (17) |
| C22—C23—C24—C25 | −55.9 (3) |
| H··· | ||||
| N1—H1···O4i | 0.86 | 2.54 | 3.305 (2) | 148 |
| N2—H2···O2ii | 0.86 | 2.25 | 3.0578 (18) | 156 |
| N3—H3···O1iii | 0.86 | 1.97 | 2.8229 (18) | 170 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯O4i | 0.86 | 2.54 | 3.305 (2) | 148 |
| N2—H2⋯O2ii | 0.86 | 2.25 | 3.0578 (18) | 156 |
| N3—H3⋯O1iii | 0.86 | 1.97 | 2.8229 (18) | 170 |
Symmetry codes: (i) ; (ii) ; (iii) .