| Literature DB >> 21754754 |
Mehrdad Pourayoubi, Mahnaz Rostami Chaijan, Laura Torre-Fernández, Santiago García-Granda.
Abstract
In the title compound, C(19)H(30)N(3)O(2)P, the central P atom has a distorted tetra-hedral configuration. The N atoms in both cyclo-hexyl-amide moieties exhibit a slight deviation [0.32 (7) and 0.44 (6) Å] from planarity, while the benzoyl-amide N atom is planar [0.11 (3) Å]. In the crystal, mol-ecules are linked via N-H⋯O(P) and N-H⋯O(C) hydrogen bonds, forming R(2) (2)(10) rings within linear arrangements parallel to the b axis.Entities:
Year: 2011 PMID: 21754754 PMCID: PMC3120389 DOI: 10.1107/S1600536811016679
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C19H30N3O2P | |
| Monoclinic, | Cu |
| Hall symbol: C -2yc | Cell parameters from 1733 reflections |
| θ = 4.2–70.2° | |
| µ = 1.39 mm−1 | |
| β = 121.955 (11)° | Prismatic, colorless |
| 0.28 × 0.05 × 0.01 mm | |
| Oxford Diffraction Xcalibur Ruby Gemini diffractometer | 2758 independent reflections |
| Radiation source: Enhance (Cu) X-ray Source | 2294 reflections with |
| graphite | |
| Detector resolution: 10.2673 pixels mm-1 | θmax = 70.3°, θmin = 4.8° |
| ω scans | |
| Absorption correction: multi-scan ( | |
| 2758 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| (Δ/σ)max < 0.001 | |
| 2758 reflections | Δρmax = 0.46 e Å−3 |
| 239 parameters | Δρmin = −0.18 e Å−3 |
| 2 restraints | Absolute structure: Flack (1983), 908 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: 0.11 (4) |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| P1 | 0.00072 (6) | 0.2629 (2) | 0.30701 (6) | 0.0403 (2) | |
| O2 | −0.02706 (18) | 0.5292 (5) | 0.30029 (19) | 0.0504 (8) | |
| O3 | 0.11281 (18) | −0.1251 (6) | 0.3206 (2) | 0.0578 (9) | |
| N4 | 0.0865 (2) | 0.3029 (6) | 0.3150 (2) | 0.0435 (8) | |
| N5 | −0.0520 (2) | 0.0724 (7) | 0.2376 (2) | 0.0438 (9) | |
| N6 | 0.0150 (2) | 0.0959 (8) | 0.3781 (2) | 0.0458 (9) | |
| C7 | 0.1289 (2) | 0.1008 (8) | 0.3169 (2) | 0.0398 (9) | |
| C8 | 0.1958 (2) | 0.1615 (7) | 0.3117 (2) | 0.0401 (9) | |
| C9 | 0.1990 (3) | 0.3714 (9) | 0.2727 (3) | 0.0490 (11) | |
| H9 | 0.1598 | 0.4905 | 0.2518 | 0.059* | |
| C10 | 0.2585 (3) | 0.4083 (11) | 0.2640 (3) | 0.0616 (13) | |
| H10 | 0.2590 | 0.5492 | 0.2367 | 0.074* | |
| C11 | 0.3180 (3) | 0.2347 (12) | 0.2961 (3) | 0.0677 (14) | |
| H11 | 0.3587 | 0.2600 | 0.2907 | 0.081* | |
| C12 | 0.3169 (3) | 0.0239 (12) | 0.3362 (3) | 0.0722 (16) | |
| H12 | 0.3569 | −0.0923 | 0.3577 | 0.087* | |
| C13 | 0.2559 (3) | −0.0130 (10) | 0.3440 (3) | 0.0533 (12) | |
| H13 | 0.2549 | −0.1546 | 0.3708 | 0.064* | |
| C14 | −0.0945 (2) | 0.1484 (9) | 0.1595 (2) | 0.0451 (10) | |
| H14 | −0.1203 | 0.3120 | 0.1554 | 0.054* | |
| C15 | −0.1535 (3) | −0.0560 (13) | 0.1154 (3) | 0.0727 (17) | |
| H15A | −0.1872 | −0.0665 | 0.1336 | 0.087* | |
| H15B | −0.1292 | −0.2234 | 0.1235 | 0.087* | |
| C16 | −0.1994 (3) | 0.0014 (16) | 0.0314 (3) | 0.0846 (19) | |
| H16A | −0.2337 | −0.1413 | 0.0055 | 0.102* | |
| H16B | −0.2290 | 0.1571 | 0.0225 | 0.102* | |
| C17 | −0.1502 (3) | 0.0381 (11) | 0.0011 (3) | 0.0638 (13) | |
| H17B | −0.1806 | 0.0862 | −0.0511 | 0.077* | |
| H17A | −0.1251 | −0.1241 | 0.0045 | 0.077* | |
| C18 | −0.0922 (4) | 0.2463 (12) | 0.0436 (4) | 0.0774 (17) | |
| H18A | −0.1172 | 0.4125 | 0.0352 | 0.093* | |
| H18B | −0.0589 | 0.2579 | 0.0250 | 0.093* | |
| C19 | −0.0464 (3) | 0.1896 (13) | 0.1269 (3) | 0.0683 (16) | |
| H19A | −0.0162 | 0.0356 | 0.1356 | 0.082* | |
| H19B | −0.0124 | 0.3335 | 0.1525 | 0.082* | |
| C20 | 0.0677 (2) | 0.1637 (8) | 0.4557 (2) | 0.0426 (9) | |
| H20 | 0.0962 | 0.3151 | 0.4562 | 0.051* | |
| C21 | 0.1229 (3) | −0.0486 (12) | 0.4978 (3) | 0.0685 (15) | |
| H21A | 0.1533 | −0.0758 | 0.4763 | 0.082* | |
| H21B | 0.0956 | −0.2081 | 0.4916 | 0.082* | |
| C22 | 0.1746 (3) | 0.0067 (15) | 0.5810 (3) | 0.0805 (19) | |
| H22A | 0.2054 | −0.1448 | 0.6055 | 0.097* | |
| H22B | 0.2077 | 0.1498 | 0.5878 | 0.097* | |
| C23 | 0.1303 (3) | 0.0742 (10) | 0.6167 (3) | 0.0650 (14) | |
| H23B | 0.1019 | −0.0762 | 0.6155 | 0.078* | |
| H23A | 0.1646 | 0.1218 | 0.6685 | 0.078* | |
| C24 | 0.0777 (4) | 0.2951 (13) | 0.5762 (3) | 0.0771 (18) | |
| H24A | 0.1068 | 0.4505 | 0.5829 | 0.093* | |
| H24B | 0.0477 | 0.3271 | 0.5979 | 0.093* | |
| C25 | 0.0261 (3) | 0.2433 (12) | 0.4937 (3) | 0.0654 (15) | |
| H25A | −0.0029 | 0.3987 | 0.4697 | 0.078* | |
| H25B | −0.0088 | 0.1066 | 0.4868 | 0.078* | |
| H4 | 0.1046 (19) | 0.457 (7) | 0.3124 (19) | 0.015 (8)* | |
| H6 | 0.014 (3) | −0.052 (9) | 0.371 (3) | 0.037 (13)* | |
| H5 | −0.038 (3) | −0.067 (11) | 0.248 (3) | 0.062 (17)* |
| P1 | 0.0447 (5) | 0.0336 (4) | 0.0472 (5) | 0.0016 (5) | 0.0276 (4) | 0.0017 (5) |
| O2 | 0.0546 (17) | 0.0351 (15) | 0.071 (2) | 0.0019 (13) | 0.0401 (17) | 0.0037 (14) |
| O3 | 0.061 (2) | 0.0334 (17) | 0.089 (3) | 0.0009 (14) | 0.047 (2) | 0.0017 (15) |
| N4 | 0.0453 (19) | 0.0326 (18) | 0.060 (2) | 0.0006 (15) | 0.0333 (18) | −0.0008 (15) |
| N5 | 0.048 (2) | 0.035 (2) | 0.047 (2) | 0.0003 (16) | 0.0244 (18) | 0.0047 (16) |
| N6 | 0.054 (2) | 0.044 (2) | 0.046 (2) | −0.0048 (18) | 0.0301 (19) | −0.0002 (17) |
| C7 | 0.0389 (19) | 0.036 (2) | 0.045 (2) | 0.0004 (17) | 0.0228 (18) | 0.0000 (17) |
| C8 | 0.041 (2) | 0.0367 (19) | 0.042 (2) | 0.0018 (17) | 0.0213 (18) | −0.0041 (17) |
| C9 | 0.052 (3) | 0.045 (2) | 0.059 (3) | 0.002 (2) | 0.035 (2) | −0.003 (2) |
| C10 | 0.068 (3) | 0.062 (3) | 0.076 (3) | −0.003 (3) | 0.053 (3) | −0.003 (3) |
| C11 | 0.055 (3) | 0.074 (4) | 0.091 (4) | −0.011 (3) | 0.050 (3) | −0.019 (3) |
| C12 | 0.037 (3) | 0.076 (4) | 0.091 (4) | 0.011 (2) | 0.026 (3) | −0.016 (3) |
| C13 | 0.046 (2) | 0.049 (3) | 0.057 (3) | 0.006 (2) | 0.022 (2) | −0.002 (2) |
| C14 | 0.048 (2) | 0.042 (2) | 0.045 (3) | 0.0027 (19) | 0.024 (2) | 0.0002 (19) |
| C15 | 0.064 (3) | 0.103 (5) | 0.050 (3) | −0.034 (3) | 0.030 (3) | −0.006 (3) |
| C16 | 0.059 (3) | 0.116 (5) | 0.064 (4) | −0.015 (3) | 0.023 (3) | −0.008 (4) |
| C17 | 0.079 (3) | 0.057 (3) | 0.052 (3) | 0.003 (3) | 0.032 (3) | 0.004 (2) |
| C18 | 0.107 (4) | 0.070 (4) | 0.067 (4) | −0.019 (4) | 0.054 (4) | −0.003 (3) |
| C19 | 0.060 (3) | 0.091 (4) | 0.056 (3) | −0.024 (3) | 0.033 (3) | 0.001 (3) |
| C20 | 0.045 (2) | 0.041 (2) | 0.045 (2) | 0.0004 (18) | 0.025 (2) | 0.0032 (18) |
| C21 | 0.074 (3) | 0.077 (4) | 0.057 (3) | 0.027 (3) | 0.037 (3) | 0.010 (3) |
| C22 | 0.065 (3) | 0.114 (5) | 0.051 (4) | 0.028 (4) | 0.022 (3) | 0.018 (3) |
| C23 | 0.083 (4) | 0.055 (3) | 0.053 (3) | −0.001 (3) | 0.034 (3) | 0.004 (2) |
| C24 | 0.102 (5) | 0.075 (4) | 0.056 (3) | 0.017 (4) | 0.043 (3) | 0.000 (3) |
| C25 | 0.071 (3) | 0.078 (4) | 0.057 (3) | 0.023 (3) | 0.040 (3) | 0.006 (3) |
| P1—O2 | 1.468 (3) | C16—C17 | 1.487 (8) |
| P1—N6 | 1.615 (4) | C16—H16A | 0.9700 |
| P1—N5 | 1.618 (4) | C16—H16B | 0.9700 |
| P1—N4 | 1.730 (4) | C17—C18 | 1.509 (8) |
| O3—C7 | 1.225 (5) | C17—H17B | 0.9700 |
| N4—C7 | 1.356 (5) | C17—H17A | 0.9700 |
| N4—H4 | 0.90 (4) | C18—C19 | 1.521 (9) |
| N5—C14 | 1.454 (6) | C18—H18A | 0.9700 |
| N5—H5 | 0.77 (5) | C18—H18B | 0.9700 |
| N6—C20 | 1.453 (6) | C19—H19A | 0.9700 |
| N6—H6 | 0.78 (4) | C19—H19B | 0.9700 |
| C7—C8 | 1.499 (6) | C20—C21 | 1.496 (7) |
| C8—C9 | 1.382 (6) | C20—C25 | 1.521 (6) |
| C8—C13 | 1.397 (6) | C20—H20 | 0.9800 |
| C9—C10 | 1.366 (7) | C21—C22 | 1.525 (8) |
| C9—H9 | 0.9300 | C21—H21A | 0.9700 |
| C10—C11 | 1.387 (8) | C21—H21B | 0.9700 |
| C10—H10 | 0.9300 | C22—C23 | 1.514 (8) |
| C11—C12 | 1.383 (9) | C22—H22A | 0.9700 |
| C11—H11 | 0.9300 | C22—H22B | 0.9700 |
| C12—C13 | 1.389 (7) | C23—C24 | 1.498 (8) |
| C12—H12 | 0.9300 | C23—H23B | 0.9700 |
| C13—H13 | 0.9300 | C23—H23A | 0.9700 |
| C14—C19 | 1.507 (7) | C24—C25 | 1.511 (8) |
| C14—C15 | 1.513 (7) | C24—H24A | 0.9700 |
| C14—H14 | 0.9800 | C24—H24B | 0.9700 |
| C15—C16 | 1.533 (8) | C25—H25A | 0.9700 |
| C15—H15A | 0.9700 | C25—H25B | 0.9700 |
| C15—H15B | 0.9700 | ||
| O2—P1—N6 | 117.2 (2) | C16—C17—C18 | 111.1 (5) |
| O2—P1—N5 | 115.7 (2) | C16—C17—H17B | 109.4 |
| N6—P1—N5 | 102.73 (19) | C18—C17—H17B | 109.4 |
| O2—P1—N4 | 103.77 (18) | C16—C17—H17A | 109.4 |
| N6—P1—N4 | 107.5 (2) | C18—C17—H17A | 109.4 |
| N5—P1—N4 | 109.79 (19) | H17B—C17—H17A | 108.0 |
| C7—N4—P1 | 123.0 (3) | C17—C18—C19 | 111.6 (5) |
| C7—N4—H4 | 113 (2) | C17—C18—H18A | 109.3 |
| P1—N4—H4 | 124 (2) | C19—C18—H18A | 109.3 |
| C14—N5—P1 | 125.4 (3) | C17—C18—H18B | 109.3 |
| C14—N5—H5 | 120 (4) | C19—C18—H18B | 109.3 |
| P1—N5—H5 | 109 (4) | H18A—C18—H18B | 108.0 |
| C20—N6—P1 | 125.2 (3) | C14—C19—C18 | 112.8 (5) |
| C20—N6—H6 | 113 (4) | C14—C19—H19A | 109.0 |
| P1—N6—H6 | 112 (4) | C18—C19—H19A | 109.0 |
| O3—C7—N4 | 122.2 (4) | C14—C19—H19B | 109.0 |
| O3—C7—C8 | 120.2 (4) | C18—C19—H19B | 109.0 |
| N4—C7—C8 | 117.6 (3) | H19A—C19—H19B | 107.8 |
| C9—C8—C13 | 118.6 (4) | N6—C20—C21 | 112.4 (4) |
| C9—C8—C7 | 123.4 (4) | N6—C20—C25 | 110.6 (4) |
| C13—C8—C7 | 117.9 (4) | C21—C20—C25 | 111.4 (4) |
| C10—C9—C8 | 121.6 (5) | N6—C20—H20 | 107.4 |
| C10—C9—H9 | 119.2 | C21—C20—H20 | 107.4 |
| C8—C9—H9 | 119.2 | C25—C20—H20 | 107.4 |
| C9—C10—C11 | 119.7 (5) | C20—C21—C22 | 113.7 (5) |
| C9—C10—H10 | 120.1 | C20—C21—H21A | 108.8 |
| C11—C10—H10 | 120.1 | C22—C21—H21A | 108.8 |
| C12—C11—C10 | 120.2 (5) | C20—C21—H21B | 108.8 |
| C12—C11—H11 | 119.9 | C22—C21—H21B | 108.8 |
| C10—C11—H11 | 119.9 | H21A—C21—H21B | 107.7 |
| C11—C12—C13 | 119.6 (5) | C23—C22—C21 | 111.5 (5) |
| C11—C12—H12 | 120.2 | C23—C22—H22A | 109.3 |
| C13—C12—H12 | 120.2 | C21—C22—H22A | 109.3 |
| C12—C13—C8 | 120.3 (5) | C23—C22—H22B | 109.3 |
| C12—C13—H13 | 119.9 | C21—C22—H22B | 109.3 |
| C8—C13—H13 | 119.9 | H22A—C22—H22B | 108.0 |
| N5—C14—C19 | 113.5 (4) | C24—C23—C22 | 110.6 (5) |
| N5—C14—C15 | 108.8 (4) | C24—C23—H23B | 109.5 |
| C19—C14—C15 | 110.2 (4) | C22—C23—H23B | 109.5 |
| N5—C14—H14 | 108.1 | C24—C23—H23A | 109.5 |
| C19—C14—H14 | 108.1 | C22—C23—H23A | 109.5 |
| C15—C14—H14 | 108.1 | H23B—C23—H23A | 108.1 |
| C14—C15—C16 | 112.7 (5) | C23—C24—C25 | 112.7 (5) |
| C14—C15—H15A | 109.1 | C23—C24—H24A | 109.1 |
| C16—C15—H15A | 109.1 | C25—C24—H24A | 109.1 |
| C14—C15—H15B | 109.1 | C23—C24—H24B | 109.1 |
| C16—C15—H15B | 109.1 | C25—C24—H24B | 109.1 |
| H15A—C15—H15B | 107.8 | H24A—C24—H24B | 107.8 |
| C17—C16—C15 | 111.6 (5) | C24—C25—C20 | 113.2 (5) |
| C17—C16—H16A | 109.3 | C24—C25—H25A | 108.9 |
| C15—C16—H16A | 109.3 | C20—C25—H25A | 108.9 |
| C17—C16—H16B | 109.3 | C24—C25—H25B | 108.9 |
| C15—C16—H16B | 109.3 | C20—C25—H25B | 108.9 |
| H16A—C16—H16B | 108.0 | H25A—C25—H25B | 107.8 |
| O2—P1—N4—C7 | −174.9 (4) | C7—C8—C13—C12 | 175.4 (4) |
| N6—P1—N4—C7 | 60.3 (4) | P1—N5—C14—C19 | 74.0 (5) |
| N5—P1—N4—C7 | −50.7 (4) | P1—N5—C14—C15 | −162.9 (4) |
| O2—P1—N5—C14 | 37.2 (4) | N5—C14—C15—C16 | −177.7 (5) |
| N6—P1—N5—C14 | 166.0 (4) | C19—C14—C15—C16 | −52.6 (7) |
| N4—P1—N5—C14 | −79.8 (4) | C14—C15—C16—C17 | 54.8 (8) |
| O2—P1—N6—C20 | −61.0 (4) | C15—C16—C17—C18 | −55.0 (8) |
| N5—P1—N6—C20 | 171.1 (4) | C16—C17—C18—C19 | 55.1 (8) |
| N4—P1—N6—C20 | 55.2 (4) | N5—C14—C19—C18 | 175.1 (5) |
| P1—N4—C7—O3 | −7.5 (6) | C15—C14—C19—C18 | 52.8 (7) |
| P1—N4—C7—C8 | 170.5 (3) | C17—C18—C19—C14 | −54.7 (8) |
| O3—C7—C8—C9 | 147.1 (4) | P1—N6—C20—C21 | −124.3 (4) |
| N4—C7—C8—C9 | −31.0 (6) | P1—N6—C20—C25 | 110.5 (4) |
| O3—C7—C8—C13 | −28.7 (6) | N6—C20—C21—C22 | −174.9 (5) |
| N4—C7—C8—C13 | 153.3 (4) | C25—C20—C21—C22 | −50.1 (7) |
| C13—C8—C9—C10 | 1.2 (7) | C20—C21—C22—C23 | 53.6 (7) |
| C7—C8—C9—C10 | −174.5 (5) | C21—C22—C23—C24 | −54.7 (7) |
| C8—C9—C10—C11 | −1.2 (8) | C22—C23—C24—C25 | 55.0 (7) |
| C9—C10—C11—C12 | 0.5 (8) | C23—C24—C25—C20 | −52.9 (7) |
| C10—C11—C12—C13 | 0.1 (8) | N6—C20—C25—C24 | 175.3 (5) |
| C11—C12—C13—C8 | −0.1 (8) | C21—C20—C25—C24 | 49.5 (7) |
| C9—C8—C13—C12 | −0.6 (7) |
| H··· | ||||
| N4—H4···O3i | 0.90 (4) | 2.16 (4) | 2.988 (4) | 154 (3) |
| N5—H5···O2ii | 0.77 (5) | 2.30 (6) | 3.019 (5) | 156 (6) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N4—H4⋯O3i | 0.90 (4) | 2.16 (4) | 2.988 (4) | 154 (3) |
| N5—H5⋯O2ii | 0.77 (5) | 2.30 (6) | 3.019 (5) | 156 (6) |
Symmetry codes: (i) ; (ii) .