| Literature DB >> 22059015 |
Mehrdad Pourayoubi, Atekeh Tarahhomi, Arnold L Rheingold, James A Golen.
Abstract
The phosphoryl and carbonyl groups in the title compound, C(15)H(20)F(2)N(3)O(2)P, are anti with respect to each other (but the P- and C-groups are separated by another atom) and the P atom is in a tetra-hedral coordination environment. Two C atoms in one of the pyrrolidinyl fragments are disordered over two sets of sites with occupancies of 0.746 (8) and 0.254 (8). The environments of the pyrrolidinyl N atoms show a slight deviation from planarity and none of the three N atoms is involved in any hydrogen bond as an acceptor. In the crystal, pairs of inter-molecular N-H⋯O hydrogen bonds form inversion dimers.Entities:
Year: 2011 PMID: 22059015 PMCID: PMC3200646 DOI: 10.1107/S1600536811033216
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C15H20F2N3O2P | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 7152 reflections |
| θ = 2.5–27.9° | |
| µ = 0.20 mm−1 | |
| β = 99.296 (3)° | Block, colourless |
| 0.40 × 0.30 × 0.25 mm | |
| Bruker APEXII CCD diffractometer | 3776 independent reflections |
| Radiation source: fine-focus sealed tube | 2953 reflections with |
| graphite | |
| φ and ω scans | θmax = 27.9°, θmin = 2.3° |
| Absorption correction: multi-scan ( | |
| 13279 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3776 reflections | (Δ/σ)max < 0.001 |
| 230 parameters | Δρmax = 0.39 e Å−3 |
| 7 restraints | Δρmin = −0.41 e Å−3 |
| Experimental. IR (KBr, ν, cm-1): 3062 (NH), 2846, 1684, 1622, 1465, 1442, 1284, 1218, 1181, 1092, 1008, 876, 800, 768, 708, 586. |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| P1 | 0.58132 (4) | 0.60634 (4) | 0.14444 (5) | 0.02623 (15) | |
| F1 | 0.06841 (11) | 0.66217 (8) | 0.14052 (12) | 0.0357 (3) | |
| F2 | 0.33806 (10) | 0.40553 (8) | 0.20332 (11) | 0.0333 (3) | |
| O1 | 0.34013 (13) | 0.65942 (10) | 0.26101 (14) | 0.0340 (4) | |
| O2 | 0.65277 (12) | 0.54022 (11) | 0.07877 (12) | 0.0322 (4) | |
| N1 | 0.42250 (14) | 0.57290 (13) | 0.12010 (15) | 0.0283 (4) | |
| H1A | 0.402 (2) | 0.5349 (12) | 0.0604 (16) | 0.034* | |
| N2 | 0.64224 (15) | 0.60885 (11) | 0.29142 (15) | 0.0260 (4) | |
| N3 | 0.57871 (16) | 0.71092 (14) | 0.10109 (18) | 0.0396 (5) | |
| C1 | 0.08224 (17) | 0.57212 (14) | 0.15613 (17) | 0.0249 (4) | |
| C2 | −0.02954 (17) | 0.52080 (14) | 0.15101 (18) | 0.0282 (4) | |
| H2A | −0.1144 | 0.5478 | 0.1386 | 0.034* | |
| C3 | −0.01492 (18) | 0.42859 (15) | 0.16440 (19) | 0.0304 (5) | |
| H3A | −0.0908 | 0.3919 | 0.1621 | 0.036* | |
| C4 | 0.10900 (19) | 0.38887 (14) | 0.18117 (18) | 0.0284 (4) | |
| H4A | 0.1190 | 0.3256 | 0.1904 | 0.034* | |
| C5 | 0.21675 (17) | 0.44419 (14) | 0.18402 (17) | 0.0260 (4) | |
| C6 | 0.20909 (16) | 0.53694 (13) | 0.17294 (16) | 0.0225 (4) | |
| C7 | 0.32904 (17) | 0.59659 (14) | 0.18895 (17) | 0.0249 (4) | |
| C8 | 0.6309 (2) | 0.68401 (14) | 0.3773 (2) | 0.0328 (5) | |
| H8A | 0.5548 | 0.7229 | 0.3452 | 0.039* | |
| H8B | 0.7120 | 0.7209 | 0.3900 | 0.039* | |
| C9 | 0.6109 (3) | 0.63821 (17) | 0.4964 (2) | 0.0440 (6) | |
| H9A | 0.5167 | 0.6244 | 0.4962 | 0.053* | |
| H9B | 0.6438 | 0.6761 | 0.5695 | 0.053* | |
| C10 | 0.6916 (3) | 0.55236 (17) | 0.4966 (2) | 0.0450 (6) | |
| H10A | 0.6603 | 0.5057 | 0.5497 | 0.054* | |
| H10B | 0.7862 | 0.5641 | 0.5265 | 0.054* | |
| C11 | 0.6688 (2) | 0.52362 (14) | 0.36086 (18) | 0.0334 (5) | |
| H11A | 0.7477 | 0.4934 | 0.3391 | 0.040* | |
| H11B | 0.5926 | 0.4823 | 0.3431 | 0.040* | |
| C12 | 0.7037 (2) | 0.75855 (18) | 0.0940 (3) | 0.0512 (7) | |
| H12A | 0.7311 | 0.7953 | 0.1693 | 0.061* | 0.746 (8) |
| H12B | 0.7748 | 0.7152 | 0.0857 | 0.061* | 0.746 (8) |
| H12C | 0.7680 | 0.7205 | 0.0597 | 0.061* | 0.254 (8) |
| H12D | 0.7447 | 0.7840 | 0.1748 | 0.061* | 0.254 (8) |
| C13 | 0.6757 (6) | 0.8164 (5) | −0.0173 (6) | 0.0601 (19) | 0.746 (8) |
| H13A | 0.6871 | 0.7829 | −0.0933 | 0.072* | 0.746 (8) |
| H13B | 0.7335 | 0.8700 | −0.0094 | 0.072* | 0.746 (8) |
| C14 | 0.5338 (4) | 0.8424 (3) | −0.0195 (4) | 0.0520 (13) | 0.746 (8) |
| H14A | 0.4933 | 0.8646 | −0.1024 | 0.062* | 0.746 (8) |
| H14B | 0.5252 | 0.8890 | 0.0434 | 0.062* | 0.746 (8) |
| C13A | 0.6387 (15) | 0.8325 (12) | 0.0017 (13) | 0.043 (4) | 0.254 (8) |
| H13C | 0.6062 | 0.8819 | 0.0495 | 0.051* | 0.254 (8) |
| H13D | 0.7061 | 0.8577 | −0.0438 | 0.051* | 0.254 (8) |
| C14A | 0.5278 (10) | 0.7968 (8) | −0.0887 (9) | 0.048 (3) | 0.254 (8) |
| H14C | 0.5559 | 0.7543 | −0.1492 | 0.057* | 0.254 (8) |
| H14D | 0.4704 | 0.8443 | −0.1318 | 0.057* | 0.254 (8) |
| C15 | 0.4701 (2) | 0.7512 (2) | 0.0127 (3) | 0.0557 (8) | |
| H15A | 0.3910 | 0.7613 | 0.0518 | 0.067* | 0.746 (8) |
| H15B | 0.4462 | 0.7131 | −0.0620 | 0.067* | 0.746 (8) |
| H15C | 0.4195 | 0.7936 | 0.0565 | 0.067* | 0.254 (8) |
| H15D | 0.4095 | 0.7034 | −0.0250 | 0.067* | 0.254 (8) |
| P1 | 0.0153 (2) | 0.0358 (3) | 0.0272 (3) | −0.00273 (19) | 0.00216 (18) | 0.0048 (2) |
| F1 | 0.0267 (6) | 0.0268 (7) | 0.0548 (8) | 0.0024 (5) | 0.0109 (5) | −0.0006 (6) |
| F2 | 0.0230 (5) | 0.0356 (7) | 0.0407 (7) | 0.0057 (5) | 0.0034 (5) | 0.0040 (5) |
| O1 | 0.0278 (7) | 0.0339 (9) | 0.0410 (8) | −0.0075 (6) | 0.0079 (6) | −0.0103 (7) |
| O2 | 0.0182 (6) | 0.0502 (10) | 0.0279 (7) | −0.0018 (6) | 0.0030 (5) | −0.0034 (7) |
| N1 | 0.0187 (7) | 0.0436 (11) | 0.0230 (8) | −0.0054 (7) | 0.0046 (6) | −0.0037 (8) |
| N2 | 0.0261 (8) | 0.0215 (9) | 0.0284 (8) | −0.0003 (6) | −0.0019 (6) | 0.0007 (7) |
| N3 | 0.0218 (8) | 0.0465 (12) | 0.0508 (12) | 0.0006 (8) | 0.0067 (7) | 0.0229 (10) |
| C1 | 0.0244 (8) | 0.0237 (10) | 0.0277 (9) | 0.0011 (7) | 0.0079 (7) | −0.0022 (8) |
| C2 | 0.0179 (8) | 0.0351 (12) | 0.0325 (10) | −0.0003 (8) | 0.0067 (7) | −0.0042 (9) |
| C3 | 0.0251 (9) | 0.0355 (12) | 0.0318 (10) | −0.0099 (8) | 0.0083 (8) | −0.0042 (9) |
| C4 | 0.0305 (9) | 0.0264 (11) | 0.0291 (10) | −0.0035 (8) | 0.0074 (8) | 0.0001 (8) |
| C5 | 0.0215 (8) | 0.0323 (11) | 0.0242 (9) | 0.0032 (8) | 0.0035 (7) | 0.0001 (8) |
| C6 | 0.0180 (8) | 0.0289 (11) | 0.0213 (9) | −0.0024 (7) | 0.0055 (7) | −0.0018 (8) |
| C7 | 0.0189 (8) | 0.0306 (11) | 0.0250 (9) | −0.0026 (7) | 0.0027 (7) | 0.0014 (8) |
| C8 | 0.0306 (10) | 0.0233 (11) | 0.0408 (12) | 0.0019 (8) | −0.0047 (8) | −0.0049 (9) |
| C9 | 0.0621 (15) | 0.0340 (13) | 0.0371 (12) | 0.0038 (11) | 0.0115 (11) | −0.0074 (10) |
| C10 | 0.0674 (16) | 0.0360 (14) | 0.0287 (11) | 0.0082 (12) | −0.0009 (11) | −0.0024 (10) |
| C11 | 0.0458 (12) | 0.0254 (11) | 0.0272 (10) | 0.0066 (9) | 0.0004 (9) | −0.0005 (9) |
| C12 | 0.0343 (11) | 0.0389 (15) | 0.085 (2) | −0.0063 (10) | 0.0237 (12) | 0.0122 (14) |
| C13 | 0.091 (4) | 0.038 (3) | 0.064 (3) | −0.025 (3) | 0.052 (3) | −0.008 (2) |
| C14 | 0.081 (3) | 0.040 (2) | 0.036 (2) | −0.0016 (19) | 0.0119 (19) | 0.0143 (18) |
| C13A | 0.048 (8) | 0.046 (9) | 0.035 (7) | −0.004 (6) | 0.010 (6) | 0.013 (6) |
| C14A | 0.072 (7) | 0.037 (6) | 0.032 (6) | 0.001 (5) | 0.004 (5) | 0.007 (5) |
| C15 | 0.0462 (13) | 0.068 (2) | 0.0523 (16) | 0.0092 (13) | 0.0052 (12) | 0.0353 (14) |
| P1—O2 | 1.4803 (16) | C9—H9B | 0.9900 |
| P1—N3 | 1.625 (2) | C10—C11 | 1.524 (3) |
| P1—N2 | 1.6261 (17) | C10—H10A | 0.9900 |
| P1—N1 | 1.6872 (16) | C10—H10B | 0.9900 |
| F1—C1 | 1.355 (2) | C11—H11A | 0.9900 |
| F2—C5 | 1.359 (2) | C11—H11B | 0.9900 |
| O1—C7 | 1.215 (2) | C12—C13 | 1.479 (7) |
| N1—C7 | 1.359 (2) | C12—C13A | 1.566 (14) |
| N1—H1A | 0.863 (9) | C12—H12A | 0.9900 |
| N2—C8 | 1.476 (3) | C12—H12B | 0.9900 |
| N2—C11 | 1.480 (3) | C12—H12C | 0.9891 |
| N3—C15 | 1.480 (3) | C12—H12D | 0.9903 |
| N3—C12 | 1.481 (3) | C13—C14 | 1.507 (7) |
| C1—C2 | 1.374 (3) | C13—H13A | 0.9900 |
| C1—C6 | 1.390 (2) | C13—H13B | 0.9900 |
| C2—C3 | 1.385 (3) | C14—C15 | 1.571 (4) |
| C2—H2A | 0.9500 | C14—H14A | 0.9900 |
| C3—C4 | 1.390 (3) | C14—H14B | 0.9900 |
| C3—H3A | 0.9500 | C13A—C14A | 1.481 (15) |
| C4—C5 | 1.377 (3) | C13A—H13C | 0.9900 |
| C4—H4A | 0.9500 | C13A—H13D | 0.9900 |
| C5—C6 | 1.386 (3) | C14A—C15 | 1.500 (9) |
| C6—C7 | 1.507 (2) | C14A—H14C | 0.9900 |
| C8—C9 | 1.512 (3) | C14A—H14D | 0.9900 |
| C8—H8A | 0.9900 | C15—H15A | 0.9900 |
| C8—H8B | 0.9900 | C15—H15B | 0.9900 |
| C9—C10 | 1.523 (3) | C15—H15C | 0.9892 |
| C9—H9A | 0.9900 | C15—H15D | 0.9898 |
| O2—P1—N3 | 118.75 (10) | C13—C12—N3 | 105.4 (3) |
| O2—P1—N2 | 110.54 (8) | N3—C12—C13A | 94.9 (6) |
| N3—P1—N2 | 104.53 (10) | C13—C12—H12A | 110.7 |
| O2—P1—N1 | 105.77 (9) | N3—C12—H12A | 110.7 |
| N3—P1—N1 | 105.44 (9) | C13A—C12—H12A | 100.4 |
| N2—P1—N1 | 111.79 (8) | C13—C12—H12B | 110.7 |
| C7—N1—P1 | 126.16 (14) | N3—C12—H12B | 110.7 |
| C7—N1—H1A | 118.4 (15) | C13A—C12—H12B | 130.1 |
| P1—N1—H1A | 115.3 (15) | H12A—C12—H12B | 108.8 |
| C8—N2—C11 | 110.53 (16) | C13—C12—H12C | 94.3 |
| C8—N2—P1 | 125.92 (13) | N3—C12—H12C | 112.7 |
| C11—N2—P1 | 119.72 (13) | C13A—C12—H12C | 113.6 |
| C15—N3—C12 | 110.05 (19) | H12A—C12—H12C | 120.9 |
| C15—N3—P1 | 123.53 (17) | C13—C12—H12D | 120.5 |
| C12—N3—P1 | 119.96 (15) | N3—C12—H12D | 112.6 |
| F1—C1—C2 | 118.29 (16) | C13A—C12—H12D | 112.4 |
| F1—C1—C6 | 117.78 (16) | H12B—C12—H12D | 96.8 |
| C2—C1—C6 | 123.90 (19) | H12C—C12—H12D | 110.0 |
| C1—C2—C3 | 118.04 (17) | C12—C13—C14 | 102.8 (4) |
| C1—C2—H2A | 121.0 | C12—C13—H13A | 111.2 |
| C3—C2—H2A | 121.0 | C14—C13—H13A | 111.2 |
| C2—C3—C4 | 121.09 (18) | C12—C13—H13B | 111.2 |
| C2—C3—H3A | 119.5 | C14—C13—H13B | 111.2 |
| C4—C3—H3A | 119.5 | H13A—C13—H13B | 109.1 |
| C5—C4—C3 | 117.83 (19) | C13—C14—C15 | 102.3 (4) |
| C5—C4—H4A | 121.1 | C13—C14—H14A | 111.3 |
| C3—C4—H4A | 121.1 | C15—C14—H14A | 111.3 |
| F2—C5—C4 | 117.79 (18) | C13—C14—H14B | 111.3 |
| F2—C5—C6 | 118.20 (16) | C15—C14—H14B | 111.3 |
| C4—C5—C6 | 123.97 (17) | H14A—C14—H14B | 109.2 |
| C5—C6—C1 | 115.16 (16) | C14A—C13A—C12 | 112.3 (12) |
| C5—C6—C7 | 122.82 (16) | C14A—C13A—H13C | 109.1 |
| C1—C6—C7 | 121.82 (18) | C12—C13A—H13C | 109.1 |
| O1—C7—N1 | 123.83 (17) | C14A—C13A—H13D | 109.1 |
| O1—C7—C6 | 121.16 (17) | C12—C13A—H13D | 109.1 |
| N1—C7—C6 | 114.99 (17) | H13C—C13A—H13D | 107.9 |
| N2—C8—C9 | 103.94 (17) | C13A—C14A—C15 | 91.4 (9) |
| N2—C8—H8A | 111.0 | C13A—C14A—H14C | 113.4 |
| C9—C8—H8A | 111.0 | C15—C14A—H14C | 113.4 |
| N2—C8—H8B | 111.0 | C13A—C14A—H14D | 113.4 |
| C9—C8—H8B | 111.0 | C15—C14A—H14D | 113.4 |
| H8A—C8—H8B | 109.0 | H14C—C14A—H14D | 110.7 |
| C8—C9—C10 | 103.24 (19) | N3—C15—C14A | 108.5 (4) |
| C8—C9—H9A | 111.1 | N3—C15—C14 | 101.4 (2) |
| C10—C9—H9A | 111.1 | N3—C15—H15A | 111.5 |
| C8—C9—H9B | 111.1 | C14A—C15—H15A | 134.5 |
| C10—C9—H9B | 111.1 | C14—C15—H15A | 111.5 |
| H9A—C9—H9B | 109.1 | N3—C15—H15B | 111.5 |
| C9—C10—C11 | 103.61 (18) | C14A—C15—H15B | 74.1 |
| C9—C10—H10A | 111.0 | C14—C15—H15B | 111.5 |
| C11—C10—H10A | 111.0 | H15A—C15—H15B | 109.3 |
| C9—C10—H10B | 111.0 | N3—C15—H15C | 110.1 |
| C11—C10—H10B | 111.0 | C14A—C15—H15C | 111.7 |
| H10A—C10—H10B | 109.0 | C14—C15—H15C | 80.1 |
| N2—C11—C10 | 104.16 (17) | H15B—C15—H15C | 133.1 |
| N2—C11—H11A | 110.9 | N3—C15—H15D | 109.8 |
| C10—C11—H11A | 110.9 | C14A—C15—H15D | 108.4 |
| N2—C11—H11B | 110.9 | C14—C15—H15D | 141.7 |
| C10—C11—H11B | 110.9 | H15A—C15—H15D | 77.4 |
| H11A—C11—H11B | 108.9 | H15C—C15—H15D | 108.3 |
| O2—P1—N1—C7 | 160.11 (17) | P1—N1—C7—C6 | −162.13 (14) |
| N3—P1—N1—C7 | −73.26 (19) | C5—C6—C7—O1 | −126.8 (2) |
| N2—P1—N1—C7 | 39.7 (2) | C1—C6—C7—O1 | 47.8 (3) |
| O2—P1—N2—C8 | 157.70 (16) | C5—C6—C7—N1 | 51.5 (2) |
| N3—P1—N2—C8 | 28.81 (18) | C1—C6—C7—N1 | −133.96 (19) |
| N1—P1—N2—C8 | −84.76 (18) | C11—N2—C8—C9 | −16.4 (2) |
| O2—P1—N2—C11 | −46.49 (17) | P1—N2—C8—C9 | 141.28 (16) |
| N3—P1—N2—C11 | −175.38 (15) | N2—C8—C9—C10 | 33.4 (2) |
| N1—P1—N2—C11 | 71.05 (17) | C8—C9—C10—C11 | −38.2 (2) |
| O2—P1—N3—C15 | 95.4 (2) | C8—N2—C11—C10 | −7.4 (2) |
| N2—P1—N3—C15 | −140.9 (2) | P1—N2—C11—C10 | −166.62 (15) |
| N1—P1—N3—C15 | −22.9 (2) | C9—C10—C11—N2 | 28.0 (2) |
| O2—P1—N3—C12 | −53.6 (2) | C15—N3—C12—C13 | −11.0 (4) |
| N2—P1—N3—C12 | 70.2 (2) | P1—N3—C12—C13 | 141.7 (3) |
| N1—P1—N3—C12 | −171.80 (19) | C15—N3—C12—C13A | 5.5 (7) |
| F1—C1—C2—C3 | 178.66 (18) | P1—N3—C12—C13A | 158.3 (6) |
| C6—C1—C2—C3 | 0.5 (3) | N3—C12—C13—C14 | 33.6 (5) |
| C1—C2—C3—C4 | −0.7 (3) | C13A—C12—C13—C14 | −25 (2) |
| C2—C3—C4—C5 | 0.0 (3) | C12—C13—C14—C15 | −42.7 (5) |
| C3—C4—C5—F2 | 178.50 (17) | C13—C12—C13A—C14A | 89 (3) |
| C3—C4—C5—C6 | 0.9 (3) | N3—C12—C13A—C14A | −35.5 (12) |
| F2—C5—C6—C1 | −178.62 (16) | C12—C13A—C14A—C15 | 47.7 (13) |
| C4—C5—C6—C1 | −1.1 (3) | C12—N3—C15—C14A | 23.9 (6) |
| F2—C5—C6—C7 | −3.8 (3) | P1—N3—C15—C14A | −127.7 (5) |
| C4—C5—C6—C7 | 173.80 (18) | C12—N3—C15—C14 | −15.1 (3) |
| F1—C1—C6—C5 | −177.82 (17) | P1—N3—C15—C14 | −166.7 (2) |
| C2—C1—C6—C5 | 0.3 (3) | C13A—C14A—C15—N3 | −40.9 (10) |
| F1—C1—C6—C7 | 7.3 (3) | C13A—C14A—C15—C14 | 44.1 (8) |
| C2—C1—C6—C7 | −174.62 (18) | C13—C14—C15—N3 | 35.1 (4) |
| P1—N1—C7—O1 | 16.1 (3) | C13—C14—C15—C14A | −70.4 (8) |
| H··· | ||||
| N1—H1A···O2i | 0.86 (1) | 1.90 (1) | 2.757 (2) | 175 (2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1 | 0.86 (1) | 1.90 (1) | 2.757 (2) | 175 (2) |
Symmetry code: (i) .