Literature DB >> 16089422

Direct probe of iron vibrations elucidates NO activation of heme proteins.

Weiqiao Zeng1, Nathan J Silvernail, David C Wharton, Georgi Y Georgiev, Bogdan M Leu, W Robert Scheidt, Jiyong Zhao, Wolfgang Sturhahn, E Ercan Alp, J Timothy Sage.   

Abstract

We use nuclear resonance vibrational spectroscopy (NRVS) to identify the Fe-NO stretching frequency in the NO adduct of myoglobin (MbNO) and in the related six-coordinate porphyrin Fe(TPP)(1-MeIm)(NO). Frequency shifts observed in MbNO Raman spectra upon isotopic substitution of Fe or the nitrosyl nitrogen confirm and extend the NRVS results. In contrast with previous assignments, the Fe-NO frequency of these six-coordinate complexes lies 70-100 cm-1 lower than in the analogous five-coordinate nitrosyl complexes, indicating a significant weakening of the Fe-NO bond in the presence of a trans imidazole ligand. This result supports proposed mechanisms for NO activation of heme proteins and underscores the value of NRVS as a direct probe of metal reactivity in complex biomolecules.

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Year:  2005        PMID: 16089422      PMCID: PMC1502376          DOI: 10.1021/ja051052x

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  20 in total

1.  Observation of Fe-H/D modes by nuclear resonant vibrational spectroscopy.

Authors:  Uwe Bergmann; Wolfgang Sturhahn; Donald E Linn; Francis E Jenney; Michael W W Adams; Kresimir Rupnik; Brian J Hales; Ercan E Alp; Aaron Mayse; Stephen P Cramer
Journal:  J Am Chem Soc       Date:  2003-04-09       Impact factor: 15.419

2.  Crystal structure of an oxygen-binding heme domain related to soluble guanylate cyclases.

Authors:  Patricia Pellicena; David S Karow; Elizabeth M Boon; Michael A Marletta; John Kuriyan
Journal:  Proc Natl Acad Sci U S A       Date:  2004-08-23       Impact factor: 11.205

3.  Determination of the phonon spectrum of iron in myoglobin using inelastic X-ray scattering of synchrotron radiation.

Authors:  C Keppler; K Achterhold; A Ostermann; U van Bürck; W Potzel; A I Chumakov; A Q Baron; R Rüffer; F Parak
Journal:  Eur Biophys J       Date:  1997       Impact factor: 1.733

4.  Six- to five-coordinate heme-nitrosyl conversion in cytochrome c' and its relevance to guanylate cyclase.

Authors:  Colin R Andrew; Simon J George; David M Lawson; Robert R Eady
Journal:  Biochemistry       Date:  2002-02-19       Impact factor: 3.162

5.  Electron paramagnetic resonance studies of nitrosyl ferrous heme complexes. Determination of an equilibrium between two conformations.

Authors:  R H Morse; S I Chan
Journal:  J Biol Chem       Date:  1980-08-25       Impact factor: 5.157

6.  Iron normal mode dynamics in (nitrosyl)iron(II)tetraphenylporphyrin from X-ray nuclear resonance data.

Authors:  Brajesh K Rai; Stephen M Durbin; Earl W Prohofsky; J Timothy Sage; Graeme R A Wyllie; W Robert Scheidt; Wolfgang Sturhahn; E Ercan Alp
Journal:  Biophys J       Date:  2002-06       Impact factor: 4.033

7.  FeNO structure in distal pocket mutants of myoglobin based on resonance Raman spectroscopy.

Authors:  Candace M Coyle; Kathleen M Vogel; Thomas S Rush; Pawel M Kozlowski; Robert Williams; Thomas G Spiro; Yi Dou; Masao Ikeda-Saito; John S Olson; Marek Z Zgierski
Journal:  Biochemistry       Date:  2003-05-06       Impact factor: 3.162

8.  Direct determination of the complete set of iron normal modes in a porphyrin-imidazole model for carbonmonoxy-heme proteins: [Fe(TPP)(CO)(1-MeIm)].

Authors:  Brajesh K Rai; Stephen M Durbin; Earl W Prohofsky; J Timothy Sage; Mary K Ellison; Arne Roth; W Robert Scheidt; Wolfgang Sturhahn; E Ercan Alp
Journal:  J Am Chem Soc       Date:  2003-06-11       Impact factor: 15.419

9.  Quantitative vibrational dynamics of iron in nitrosyl porphyrins.

Authors:  Bogdan M Leu; Marek Z Zgierski; Graeme R A Wyllie; W Robert Scheidt; Wolfgang Sturhahn; E Ercan Alp; Stephen M Durbin; J Timothy Sage
Journal:  J Am Chem Soc       Date:  2004-04-07       Impact factor: 15.419

10.  Five- to six-coordination in (nitrosyl)iron(II) porphyrinates: effects of binding the sixth ligand.

Authors:  Graeme R A Wyllie; Charles E Schulz; W Robert Scheidt
Journal:  Inorg Chem       Date:  2003-09-08       Impact factor: 5.165

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  22 in total

1.  Spectroscopic characterization of mononitrosyl complexes in heme--nonheme diiron centers within the myoglobin scaffold (Fe(B)Mbs): relevance to denitrifying NO reductase.

Authors:  Takahiro Hayashi; Kyle D Miner; Natasha Yeung; Ying-Wu Lin; Yi Lu; Pierre Moënne-Loccoz
Journal:  Biochemistry       Date:  2011-06-14       Impact factor: 3.162

2.  Differential sensing of protein influences by NO and CO vibrations in heme adducts.

Authors:  Mohammed Ibrahim; Changliang Xu; Thomas G Spiro
Journal:  J Am Chem Soc       Date:  2006-12-27       Impact factor: 15.419

3.  Nuclear resonance vibrational spectroscopy applied to [Fe(OEP)(NO)]: the vibrational assignments of five-coordinate ferrous heme-nitrosyls and implications for electronic structure.

Authors:  Nicolai Lehnert; Mary Grace I Galinato; Florian Paulat; George B Richter-Addo; Wolfgang Sturhahn; Nan Xu; Jiyong Zhao
Journal:  Inorg Chem       Date:  2010-05-03       Impact factor: 5.165

4.  Modeling nuclear resonance vibrational spectroscopic data of binuclear non-heme iron enzymes using density functional theory.

Authors:  Kiyoung Park; Edward I Solomon
Journal:  Can J Chem       Date:  2014-04-15       Impact factor: 1.118

5.  NMR studies of nitrophorin distal pocket side chain effects on the heme orientation and seating of NP2 as compared to NP1.

Authors:  Tatiana K Shokhireva; Robert E Berry; Hongjun Zhang; Nikolai V Shokhirev; F Ann Walker
Journal:  J Inorg Biochem       Date:  2011-06-17       Impact factor: 4.155

6.  New perspectives on iron-ligand vibrations of oxyheme complexes.

Authors:  Jianfeng Li; Qian Peng; Alexander Barabanschikov; Jeffrey W Pavlik; E Ercan Alp; Wolfgang Sturhahn; Jiyong Zhao; Charles E Schulz; J Timothy Sage; W Robert Scheidt
Journal:  Chemistry       Date:  2011-08-29       Impact factor: 5.236

7.  Spectroscopic identification of reactive porphyrin motions.

Authors:  Alexander Barabanschikov; Alexander Demidov; Minoru Kubo; Paul M Champion; J Timothy Sage; Jiyong Zhao; Wolfgang Sturhahn; E Ercan Alp
Journal:  J Chem Phys       Date:  2011-07-07       Impact factor: 3.488

Review 8.  Ambidentate H-bonding of NO and O2 in heme proteins.

Authors:  Thomas G Spiro; Alexandra V Soldatova
Journal:  J Inorg Biochem       Date:  2012-06-01       Impact factor: 4.155

9.  Ambidentate H-bonding by heme-bound NO: structural and spectral effects of -O versus -N H-bonding.

Authors:  Changliang Xu; G Spiro Thomas
Journal:  J Biol Inorg Chem       Date:  2008-05       Impact factor: 3.358

10.  3D Motions of Iron in Six-Coordinate {FeNO}(7) Hemes by Nuclear Resonance Vibration Spectroscopy.

Authors:  Qian Peng; Jeffrey W Pavlik; Nathan J Silvernail; E Ercan Alp; Michael Y Hu; Jiyong Zhao; J Timothy Sage; W Robert Scheidt
Journal:  Chemistry       Date:  2016-03-21       Impact factor: 5.236

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