Literature DB >> 11841228

Six- to five-coordinate heme-nitrosyl conversion in cytochrome c' and its relevance to guanylate cyclase.

Colin R Andrew1, Simon J George, David M Lawson, Robert R Eady.   

Abstract

The 5-coordinate ferrous heme of Alcaligenes xylosoxidans cytochrome c' reacts with NO to form a 6-coordinate nitrosyl intermediate (lambdaSoret at 415 nm) which subsequently converts to a 5-coordinate nitrosyl end product (lambdaSoret at 395 nm) in a rate-determining step. Stopped-flow measurements at pH 8.9, 25 degrees C, yield a rate constant for the formation of the 6-coordinate nitrosyl adduct, k(on) = (4.4 +/- 0.5) x 10(4) M(-1) x s(-1), which is 3-4 orders of magnitude lower than the values for other pentacoordinate ferrous hemes and is consistent with NO binding within the sterically crowded distal heme pocket. Resonance Raman measurements of the freeze-trapped 6-coordinate nitrosyl intermediate reveal an unusually high Fe-NO stretching frequency of 579 cm(-1), suggesting a distorted Fe-N-O coordination geometry. The rate of 6- to 5-coordinate heme nitrosyl conversion is also dependent upon NO concentration, with a rate constant, k(6-5) = (8.1 +/- 0.7) x 10(3) M(-1) x s(-1), implying that an additional molecule of NO is required to form the 5c-NO adduct. Since crystallographic studies have shown that the 5-coordinate nitrosyl complex of cytochrome c' binds NO to the proximal (rather than distal) face of the heme, the NO dependence of the 6- to 5-coordinate NO conversion supports a mechanism in which the weakened His ligand, as well as the distally bound NO, is displaced by a second NO molecule which attacks and is retained in the proximal coordination position. The fact that a dependent 6- to 5-coordinate nitrosyl conversion has been previously reported for soluble guanylate cyclase suggests that the mechanism of Fe-His bond cleavage may be similar to that of cytochrome c' and strengthens the recent proposal that both proteins exhibit proximal NO binding in their 5-coordinate nitrosyl adducts.

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Year:  2002        PMID: 11841228     DOI: 10.1021/bi011419k

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  33 in total

1.  Revisiting the kinetics of nitric oxide (NO) binding to soluble guanylate cyclase: the simple NO-binding model is incorrect.

Authors:  David P Ballou; Yunde Zhao; Philip E Brandish; Michael A Marletta
Journal:  Proc Natl Acad Sci U S A       Date:  2002-09-03       Impact factor: 11.205

2.  Nitric oxide binds to the proximal heme coordination site of the ferrocytochrome c/cardiolipin complex: formation mechanism and dynamics.

Authors:  Gary Silkstone; Sofia M Kapetanaki; Ivan Husu; Marten H Vos; Michael T Wilson
Journal:  J Biol Chem       Date:  2010-04-15       Impact factor: 5.157

3.  Interplay of structure and vibrational dynamics in six-coordinate heme nitrosyls.

Authors:  Nathan J Silvernail; Alexander Barabanschikov; Jeffrey W Pavlik; Bruce C Noll; Jiyong Zhao; E Ercan Alp; Wolfgang Sturhahn; J Timothy Sage; W Robert Scheidt
Journal:  J Am Chem Soc       Date:  2007-02-02       Impact factor: 15.419

Review 4.  Spectroscopic characterization of heme iron-nitrosyl species and their role in NO reductase mechanisms in diiron proteins.

Authors:  Pierre Moënne-Loccoz
Journal:  Nat Prod Rep       Date:  2007-03-23       Impact factor: 13.423

5.  Modulation of NO binding to cytochrome c' by distal and proximal haem pocket residues.

Authors:  Sonia Barbieri; Loretta M Murphy; R Gary Sawers; Robert R Eady; S Samar Hasnain
Journal:  J Biol Inorg Chem       Date:  2008-05       Impact factor: 3.358

6.  Differential sensing of protein influences by NO and CO vibrations in heme adducts.

Authors:  Mohammed Ibrahim; Changliang Xu; Thomas G Spiro
Journal:  J Am Chem Soc       Date:  2006-12-27       Impact factor: 15.419

7.  A nitric oxide-binding heterodimeric cytochrome c complex from the anammox bacterium Kuenenia stuttgartiensis binds to hydrazine synthase.

Authors:  Mohd Akram; Joachim Reimann; Andreas Dietl; Andreas Menzel; Wouter Versantvoort; Boran Kartal; Mike S M Jetten; Thomas R M Barends
Journal:  J Biol Chem       Date:  2019-09-22       Impact factor: 5.157

8.  H-NOX from Clostridium botulinum, like H-NOX from Thermoanaerobacter tengcongensis, Binds Oxygen but with a Less Stable Oxyferrous Heme Intermediate.

Authors:  Gang Wu; Wen Liu; Vladimir Berka; Ah-Lim Tsai
Journal:  Biochemistry       Date:  2015-11-25       Impact factor: 3.162

Review 9.  The heme oxygenase-carbon monoxide system: regulation and role in stress response and organ failure.

Authors:  Michael Bauer; Klaus Huse; Utz Settmacher; Ralf A Claus
Journal:  Intensive Care Med       Date:  2008-02-20       Impact factor: 17.440

10.  CO, NO and O2 as Vibrational Probes of Heme Protein Interactions.

Authors:  Thomas G Spiro; Alexandra V Soldatova; Gurusamy Balakrishnan
Journal:  Coord Chem Rev       Date:  2012-06-06       Impact factor: 22.315

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