Literature DB >> 21922552

New perspectives on iron-ligand vibrations of oxyheme complexes.

Jianfeng Li1, Qian Peng, Alexander Barabanschikov, Jeffrey W Pavlik, E Ercan Alp, Wolfgang Sturhahn, Jiyong Zhao, Charles E Schulz, J Timothy Sage, W Robert Scheidt.   

Abstract

We report our studies of the vibrational dynamics of iron for three imidazole-ligated oxyheme derivatives that mimic the active sites of histidine-ligated heme proteins complexed with dioxygen. The experimental vibrational data are obtained from nuclear resonance vibrational spectroscopy (NRVS) measurements conducted on both powder samples and oriented single crystals, and which includes several in-plane (ip) and out-of-plane (oop) measurements. Vibrational spectral assignments have been made through a combination of the oriented sample spectra and predictions based on density functional theory (DFT) calculations. The two Fe-O(2) modes that have been previously observed by resonance Raman spectroscopy in heme proteins are clearly shown to be very strongly mixed and are not simply either a bending or stretching mode. In addition, a third Fe-O(2) mode, not previously reported, has been identified. The long-sought Fe-Im stretch, not observed in resonance Raman spectra, has been identified and compared with the frequencies observed for the analogous CO and NO species. The studies also suggest that the in-plane iron motion is anisotropic and is controlled by the orientation of the Fe-O(2) group and not sensitive to the in-plane Fe-N(p) bonds and/or imidazole orientations.
Copyright © 2011 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

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Year:  2011        PMID: 21922552      PMCID: PMC3234299          DOI: 10.1002/chem.201101352

Source DB:  PubMed          Journal:  Chemistry        ISSN: 0947-6539            Impact factor:   5.236


  44 in total

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Authors:  J J WEISS
Journal:  Nature       Date:  1964-07-11       Impact factor: 49.962

2.  NATURE OF THE IRON-OXYGEN BOND IN OXYHAEMOGLOBIN.

Authors:  J J WEISS
Journal:  Nature       Date:  1964-04-04       Impact factor: 49.962

Review 3.  Nuclear resonance vibrational spectroscopy--NRVS.

Authors:  W Robert Scheidt; Stephen M Durbin; J Timothy Sage
Journal:  J Inorg Biochem       Date:  2005-01       Impact factor: 4.155

4.  Direct probe of iron vibrations elucidates NO activation of heme proteins.

Authors:  Weiqiao Zeng; Nathan J Silvernail; David C Wharton; Georgi Y Georgiev; Bogdan M Leu; W Robert Scheidt; Jiyong Zhao; Wolfgang Sturhahn; E Ercan Alp; J Timothy Sage
Journal:  J Am Chem Soc       Date:  2005-08-17       Impact factor: 15.419

5.  Steric disposition of O2 in oxyhemoglobin as revealed by its resonance Raman spectrum.

Authors:  L L Duff; E H Appelman; D F Shriver; I M Klotz
Journal:  Biochem Biophys Res Commun       Date:  1979-10-29       Impact factor: 3.575

6.  Neutron diffraction reveals oxygen-histidine hydrogen bond in oxymyoglobin.

Authors:  S E Phillips; B P Schoenborn
Journal:  Nature       Date:  1981-07-02       Impact factor: 49.962

7.  Probing vibrational anisotropy with nuclear resonance vibrational spectroscopy.

Authors:  Jeffrey W Pavlik; Alexander Barabanschikov; Allen G Oliver; E Ercan Alp; Wolfgang Sturhahn; Jiyong Zhao; J Timothy Sage; W Robert Scheidt
Journal:  Angew Chem Int Ed Engl       Date:  2010-06-14       Impact factor: 15.336

8.  Nitrosylmetalloporphyrins. III. Synthesis and molecular stereochemistry of nitrosyl-alpha, beta, gamma, delta-tetraphenylporphinato(1-methylimidazole)iron(II).

Authors:  W R Scheidt; P L Piciulo
Journal:  J Am Chem Soc       Date:  1976-03-31       Impact factor: 15.419

9.  Iron porphyrins with different imidazole ligands. A theoretical comparative study.

Authors:  Meng-Sheng Liao; Ming-Ju Huang; John D Watts
Journal:  J Phys Chem A       Date:  2010-09-09       Impact factor: 2.781

10.  The effect of oxygen on biochemical networks and the evolution of complex life.

Authors:  Jason Raymond; Daniel Segrè
Journal:  Science       Date:  2006-03-24       Impact factor: 47.728

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  9 in total

1.  Correlated ligand dynamics in oxyiron picket fence porphyrins: structural and Mössbauer investigations.

Authors:  Jianfeng Li; Bruce C Noll; Allen G Oliver; Charles E Schulz; W Robert Scheidt
Journal:  J Am Chem Soc       Date:  2013-10-01       Impact factor: 15.419

2.  Heme-protein vibrational couplings in cytochrome c provide a dynamic link that connects the heme-iron and the protein surface.

Authors:  Mary Grace I Galinato; Jesse G Kleingardner; Sarah E J Bowman; E Ercan Alp; Jiyong Zhao; Kara L Bren; Nicolai Lehnert
Journal:  Proc Natl Acad Sci U S A       Date:  2012-05-22       Impact factor: 11.205

Review 3.  What Can Be Learned from Nuclear Resonance Vibrational Spectroscopy: Vibrational Dynamics and Hemes.

Authors:  W Robert Scheidt; Jianfeng Li; J Timothy Sage
Journal:  Chem Rev       Date:  2017-09-18       Impact factor: 60.622

4.  Predicting Nuclear Resonance Vibrational Spectra of [Fe(OEP)(NO)].

Authors:  Qian Peng; Jeffrey W Pavlik; W Robert Scheidt; Olaf Wiest
Journal:  J Chem Theory Comput       Date:  2011-11-29       Impact factor: 6.006

5.  3D Motions of Iron in Six-Coordinate {FeNO}(7) Hemes by Nuclear Resonance Vibration Spectroscopy.

Authors:  Qian Peng; Jeffrey W Pavlik; Nathan J Silvernail; E Ercan Alp; Michael Y Hu; Jiyong Zhao; J Timothy Sage; W Robert Scheidt
Journal:  Chemistry       Date:  2016-03-21       Impact factor: 5.236

6.  Electronic structure and ligand vibrations in FeNO, CoNO, and FeOO porphyrin adducts.

Authors:  Alexandra V Soldatova; Mohammed Ibrahim; Thomas G Spiro
Journal:  Inorg Chem       Date:  2013-06-13       Impact factor: 5.165

Review 7.  Synthetic Fe/Cu Complexes: Toward Understanding Heme-Copper Oxidase Structure and Function.

Authors:  Suzanne M Adam; Gayan B Wijeratne; Patrick J Rogler; Daniel E Diaz; David A Quist; Jeffrey J Liu; Kenneth D Karlin
Journal:  Chem Rev       Date:  2018-10-29       Impact factor: 60.622

8.  Anisotropic iron motion in nitrosyl iron porphyrinates: natural and synthetic hemes.

Authors:  Jeffrey W Pavlik; Qian Peng; Nathan J Silvernail; E Ercan Alp; Michael Y Hu; Jiyong Zhao; J Timothy Sage; W Robert Scheidt
Journal:  Inorg Chem       Date:  2014-02-14       Impact factor: 5.165

9.  Comprehensive Fe-ligand vibration identification in {FeNO}6 hemes.

Authors:  Jianfeng Li; Qian Peng; Allen G Oliver; E Ercan Alp; Michael Y Hu; Jiyong Zhao; J Timothy Sage; W Robert Scheidt
Journal:  J Am Chem Soc       Date:  2014-12-18       Impact factor: 15.419

  9 in total

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