Literature DB >> 14872130

Fast reconstruction of four-dimensional NMR spectra from plane projections.

Eriks Kupce1, Ray Freeman.   

Abstract

Four-dimensional NMR spectroscopy can be speeded up by a large factor by a projection-reconstruction technique related to that used in X-ray tomography. The limited amount of information recorded in a few suitably-tilted projection planes suffices to recreate the entire four-dimensional spectrum. The method is demonstrated by reference to the 500 MHz spectrum of 1 millimolar aqueous solution of ubiquitin by dispersing the responses of the three-dimensional HNCO spectrum into the C(alpha) dimension of a four-dimensional HNCOCA spectrum obtained by projection-reconstruction.

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Year:  2004        PMID: 14872130     DOI: 10.1023/B:JNMR.0000015421.60023.e5

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  8 in total

1.  Reconstruction of the three-dimensional NMR spectrum of a protein from a set of plane projections.

Authors:  Eriks Kupce; Ray Freeman
Journal:  J Biomol NMR       Date:  2003-12       Impact factor: 2.835

2.  Novel 2D triple-resonance NMR experiments for sequential resonance assignments of proteins.

Authors:  Keyang Ding; Angela M Gronenborn
Journal:  J Magn Reson       Date:  2002-06       Impact factor: 2.229

3.  Reduced-dimensionality NMR spectroscopy for high-throughput protein resonance assignment.

Authors:  Thomas Szyperski; Deok C Yeh; Dinesh K Sukumaran; Hunter N B Moseley; Gaetano T Montelione
Journal:  Proc Natl Acad Sci U S A       Date:  2002-06-11       Impact factor: 11.205

4.  Multiple quadrature detection in reduced dimensionality experiments.

Authors:  Wiktor Koźmiński; Igor Zhukov
Journal:  J Biomol NMR       Date:  2003-06       Impact factor: 2.835

5.  GFT NMR, a new approach to rapidly obtain precise high-dimensional NMR spectral information.

Authors:  Seho Kim; Thomas Szyperski
Journal:  J Am Chem Soc       Date:  2003-02-05       Impact factor: 15.419

6.  New methods for fast multidimensional NMR.

Authors:  Ray Freeman; Eriks Kupce
Journal:  J Biomol NMR       Date:  2003-10       Impact factor: 2.835

7.  Projection-reconstruction of three-dimensional NMR spectra.

Authors:  Eriks Kupce; Ray Freeman
Journal:  J Am Chem Soc       Date:  2003-11-19       Impact factor: 15.419

8.  Computerized transverse axial scanning (tomography). 1. Description of system.

Authors:  G N Hounsfield
Journal:  Br J Radiol       Date:  1973-12       Impact factor: 3.039

  8 in total
  11 in total

Review 1.  Radial sampling for fast NMR: Concepts and practices over three decades.

Authors:  Brian E Coggins; Ronald A Venters; Pei Zhou
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2010-07-30       Impact factor: 9.795

2.  Addressing the overlap problem in the quantitative analysis of two dimensional NMR spectra: application to (15)N relaxation measurements.

Authors:  Vitali Tugarinov; Wing-Yiu Choy; Eriks Kupce; Lewis E Kay
Journal:  J Biomol NMR       Date:  2004-11       Impact factor: 2.835

3.  PR-CALC: a program for the reconstruction of NMR spectra from projections.

Authors:  Brian E Coggins; Pei Zhou
Journal:  J Biomol NMR       Date:  2006-03       Impact factor: 2.835

4.  Random sampling of evolution time space and Fourier transform processing.

Authors:  Krzysztof Kazimierczuk; Anna Zawadzka; Wiktor Koźmiński; Igor Zhukov
Journal:  J Biomol NMR       Date:  2006-09-21       Impact factor: 2.835

5.  Optimized co-solute paramagnetic relaxation enhancement for the rapid NMR analysis of a highly fibrillogenic peptide.

Authors:  Nur Alia Oktaviani; Michael W Risør; Young-Ho Lee; Rik P Megens; Djurre H de Jong; Renee Otten; Ruud M Scheek; Jan J Enghild; Niels Chr Nielsen; Takahisa Ikegami; Frans A A Mulder
Journal:  J Biomol NMR       Date:  2015-03-28       Impact factor: 2.835

Review 6.  Biomolecular NMR data analysis.

Authors:  Michael R Gryk; Jay Vyas; Mark W Maciejewski
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2010-05       Impact factor: 9.795

7.  Deterministic schedules for robust and reproducible non-uniform sampling in multidimensional NMR.

Authors:  Matthew T Eddy; David Ruben; Robert G Griffin; Judith Herzfeld
Journal:  J Magn Reson       Date:  2011-12-10       Impact factor: 2.229

Review 8.  Applications of non-uniform sampling and processing.

Authors:  Sven G Hyberts; Haribabu Arthanari; Gerhard Wagner
Journal:  Top Curr Chem       Date:  2012

9.  Spectroscopy by integration of frequency and time domain information for fast acquisition of high-resolution dark spectra.

Authors:  Yoh Matsuki; Matthew T Eddy; Judith Herzfeld
Journal:  J Am Chem Soc       Date:  2009-04-08       Impact factor: 15.419

10.  FM reconstruction of non-uniformly sampled protein NMR data at higher dimensions and optimization by distillation.

Authors:  Sven G Hyberts; Dominique P Frueh; Haribabu Arthanari; Gerhard Wagner
Journal:  J Biomol NMR       Date:  2009-08-25       Impact factor: 2.835

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