Literature DB >> 10805128

Transverse relaxation optimised spin-state selective NMR experiments for measurement of residual dipolar couplings.

P Permi1, A Annila.   

Abstract

Three transverse relaxation optimised NMR experiments (TROSY) for the measurement of scalar and dipolar couplings suitable for proteins dissolved in aqueous iso- and anisotropic solutions are described. The triple-spin-state-selective experiments yield couplings between 1HN-13Calpha, 15N-13Calpha, 1HN-13Calpha(i-1), 15N-13Calpha(i-1), 1HN-13C'(i-1), 15N-13C'(i-1) and 13C'(i-1)-13Calpha(i-1) without introducing nonessential spectral crowding compared with an ordinary two-dimensional 15N-1H correlation spectrum and without requiring explicit knowledge of carbon assignments. This set of alpha/beta-J-TROSY experiments is most useful for perdeuterated proteins in studies of structure-activity relationships by NMR to observe, in addition to epitopes for ligands, also conformational changes induced by binding of ligands.

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Year:  2000        PMID: 10805128     DOI: 10.1023/a:1008362211560

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  28 in total

1.  The role of coherence transfer efficiency in design of TROSY-type multidimensional NMR experiments.

Authors:  A Meissner; O W Sørensen
Journal:  J Magn Reson       Date:  1999-08       Impact factor: 2.229

2.  Structural constraints from residual tensorial couplings in high resolution NMR without an explicit term for the alignment tensor.

Authors:  S Moltke; S Grzesiek
Journal:  J Biomol NMR       Date:  1999-09       Impact factor: 2.835

3.  Integration of spin-state-selective excitation into 2D NMR correlation experiments with the heteronuclear ZQ/2Q pi rotations for 1JXH- resolved E.COSY-type measurements of heteronuclear coupling constants in proteins.

Authors:  A Meissner; J O Duus; O W Sørensen
Journal:  J Biomol NMR       Date:  1997-07       Impact factor: 2.835

4.  High-resolution heteronuclear NMR of human ubiquitin in an aqueous liquid crystalline medium.

Authors:  A Bax; N Tjandra
Journal:  J Biomol NMR       Date:  1997-10       Impact factor: 2.835

5.  Discovering high-affinity ligands for proteins.

Authors:  P J Hajduk; R P Meadows; S W Fesik
Journal:  Science       Date:  1997-10-17       Impact factor: 47.728

Review 6.  Measurement of J and dipolar couplings from simplified two-dimensional NMR spectra.

Authors:  M Ottiger; F Delaglio; A Bax
Journal:  J Magn Reson       Date:  1998-04       Impact factor: 2.229

7.  Single Transition-to-single Transition Polarization Transfer (ST2-PT) in [15N,1H]-TROSY.

Authors:  K V Pervushin; G Wider; K Wüthrich
Journal:  J Biomol NMR       Date:  1998-08       Impact factor: 2.835

8.  Measurement of 15N-13C J couplings in staphylococcal nuclease.

Authors:  F Delaglio; D A Torchia; A Bax
Journal:  J Biomol NMR       Date:  1991-11       Impact factor: 2.835

9.  Sensitivity improvement of transverse relaxation-optimized spectroscopy.

Authors:  M Rance; J P Loria
Journal:  J Magn Reson       Date:  1999-01       Impact factor: 2.229

10.  Heteronuclear correlation experiments for the determination of one-bond coupling constants.

Authors:  P Andersson; K Nordstrand; M Sunnerhagen; E Liepinsh; I Turovskis; G Otting
Journal:  J Biomol NMR       Date:  1998-05       Impact factor: 2.835

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  15 in total

1.  A new approach for obtaining sequential assignment of large proteins.

Authors:  P Permi; A Annila
Journal:  J Biomol NMR       Date:  2001-06       Impact factor: 2.835

2.  Angular dependence of 1J(Ni,Calphai) and 2J(Ni,Calpha(i-1)) coupling constants measured in J-modulated HSQCs.

Authors:  Julia Wirmer; Harald Schwalbe
Journal:  J Biomol NMR       Date:  2002-05       Impact factor: 2.835

3.  Simultaneous measurement of protein one-bond and two-bond nitrogen-carbon coupling constants using an internally referenced quantitative J-correlated [(15)N,(1)H]-TROSY-HNC experiment.

Authors:  Hans L J Wienk; Mitcheell M Martínez; Gary N Yalloway; Jürgen M Schmidt; Carlos Pérez; Heinz Rüterjans; Frank Löhr
Journal:  J Biomol NMR       Date:  2003-02       Impact factor: 2.835

4.  Quaternary structure built from subunits combining NMR and small-angle x-ray scattering data.

Authors:  Maija-Liisa Mattinen; Kimmo Pääkkönen; Teemu Ikonen; Jeremy Craven; Torbjörn Drakenberg; Ritva Serimaa; Jonathan Waltho; Arto Annila
Journal:  Biophys J       Date:  2002-08       Impact factor: 4.033

5.  A set of HA-detected experiments for measuring scalar and residual dipolar couplings.

Authors:  Peter Würtz; Kai Fredriksson; Perttu Permi
Journal:  J Biomol NMR       Date:  2005-04       Impact factor: 2.835

6.  Paramagnetic-based NMR restraints lift residual dipolar coupling degeneracy in multidomain detergent-solubilized membrane proteins.

Authors:  Lei Shi; Nathaniel J Traaseth; Raffaello Verardi; Martin Gustavsson; Jiali Gao; Gianluigi Veglia
Journal:  J Am Chem Soc       Date:  2011-02-02       Impact factor: 15.419

7.  Improved accuracy in measuring one-bond and two-bond (15)N, (13)C (α) coupling constants in proteins by double-inphase/antiphase (DIPAP) spectroscopy.

Authors:  Frank Löhr; Sina Reckel; Susanne Stefer; Volker Dötsch; Jürgen M Schmidt
Journal:  J Biomol NMR       Date:  2011-06-07       Impact factor: 2.835

8.  A spin-state-selective experiment for measuring heteronuclear one-bond and homonuclear two-bond couplings from an HSQC-type spectrum.

Authors:  Perttu Permi
Journal:  J Biomol NMR       Date:  2002-01       Impact factor: 2.835

9.  Measurement of one-bond 15N-13C' dipolar couplings in medium sized proteins.

Authors:  J J Chou; F Delaglio; A Bax
Journal:  J Biomol NMR       Date:  2000-10       Impact factor: 2.835

10.  Measurement of residual dipolar couplings from 1Halpha to 13Calpha and 15N using a simple HNCA-based experiment.

Authors:  Perttu Permi
Journal:  J Biomol NMR       Date:  2003-12       Impact factor: 2.835

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