Literature DB >> 11885978

A spin-state-selective experiment for measuring heteronuclear one-bond and homonuclear two-bond couplings from an HSQC-type spectrum.

Perttu Permi1.   

Abstract

Recently, a set of selective 1D experiments with spin-state-selective excitation for CH spin systems was introduced by Parella and Belloc (J. Magn. Reson., 148, 78-87 (2001)). We have expanded and generalized this concept further, and demonstrated that a very simple experiment utilizing spin-state-selective filtering can be used for simultaneous measurement of heteronuclear 1JNH (or 1JCH) and geminal 2JHH couplings from two-dimensional 15N-1H (or 13C-1H) correlation spectrum. The experiment has very high sensitivity owing to the preservation of equivalent coherence transfer pathways analogous to the sensitivity and gradient enhanced HSQC experiment. However, overall length of the pulse sequence is 1/(2J) shorter than the gradient selected SE-HSQC experiment. Furthermore, the spin-state-selection can be utilized between NH and NH2 (or CH and CH2) moieties by changing the phase of only one pulse. The pulse scheme will be useful for the measurement of scalar and residual dipolar couplings in wide variety of samples, due to its high sensitivity and artifact suppression efficiency. The method is tested on NH2 and CH2 moieties in 15N- and 15N/13C-labeled ubiquitin samples.

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Year:  2002        PMID: 11885978     DOI: 10.1023/a:1013877104045

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  24 in total

1.  The 3D NOESY-[(1)H,(15)N,(1)H]-ZQ-TROSY NMR experiment with diagonal peak suppression.

Authors:  K V Pervushin; G Wider; R Riek; K Wüthrich
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-17       Impact factor: 11.205

2.  Measurement of homonuclear (2)J-couplings from spin-state selective double-/zero-quantum two-dimensional NMR spectra.

Authors:  P Permi; S Heikkinen; I Kilpeläinen; A Annila
Journal:  J Magn Reson       Date:  1999-08       Impact factor: 2.229

3.  Residual dipolar (1)H-(1)H couplings of methyl groups in weakly aligned proteins.

Authors:  A Kaikkonen; G Otting
Journal:  J Am Chem Soc       Date:  2001-02-28       Impact factor: 15.419

4.  Protein side-chain rotamers from dipolar couplings in a liquid crystalline phase.

Authors:  J J Chou; A Bax
Journal:  J Am Chem Soc       Date:  2001-04-25       Impact factor: 15.419

5.  Chi1 torsion angle dynamics in proteins from dipolar couplings.

Authors:  A Mittermaier; L E Kay
Journal:  J Am Chem Soc       Date:  2001-07-18       Impact factor: 15.419

6.  NMR experiments for the sign determination of homonuclear scalar and residual dipolar couplings.

Authors:  G Otting; M Rückert; M H Levitt; A Moshref
Journal:  J Biomol NMR       Date:  2000-04       Impact factor: 2.835

7.  Integration of spin-state-selective excitation into 2D NMR correlation experiments with the heteronuclear ZQ/2Q pi rotations for 1JXH- resolved E.COSY-type measurements of heteronuclear coupling constants in proteins.

Authors:  A Meissner; J O Duus; O W Sørensen
Journal:  J Biomol NMR       Date:  1997-07       Impact factor: 2.835

8.  High-resolution heteronuclear NMR of human ubiquitin in an aqueous liquid crystalline medium.

Authors:  A Bax; N Tjandra
Journal:  J Biomol NMR       Date:  1997-10       Impact factor: 2.835

Review 9.  Measurement of J and dipolar couplings from simplified two-dimensional NMR spectra.

Authors:  M Ottiger; F Delaglio; A Bax
Journal:  J Magn Reson       Date:  1998-04       Impact factor: 2.229

10.  Nuclear magnetic dipole interactions in field-oriented proteins: information for structure determination in solution.

Authors:  J R Tolman; J M Flanagan; M A Kennedy; J H Prestegard
Journal:  Proc Natl Acad Sci U S A       Date:  1995-09-26       Impact factor: 11.205

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  8 in total

1.  MQ-HNCO-TROSY for the measurement of scalar and residual dipolar couplings in larger proteins: application to a 557-residue IgFLNa16-21.

Authors:  Sampo Mäntylahti; Outi Koskela; Pengju Jiang; Perttu Permi
Journal:  J Biomol NMR       Date:  2010-05-08       Impact factor: 2.835

2.  A set of HA-detected experiments for measuring scalar and residual dipolar couplings.

Authors:  Peter Würtz; Kai Fredriksson; Perttu Permi
Journal:  J Biomol NMR       Date:  2005-04       Impact factor: 2.835

3.  Simultaneous alpha/beta spin-state selection for (13)C and (15)N from a time-shared HSQC-IPAP experiment.

Authors:  Pau Nolis; Teodor Parella
Journal:  J Biomol NMR       Date:  2006-12-12       Impact factor: 2.835

4.  J-Spectroscopy in the presence of residual dipolar couplings: determination of one-bond coupling constants and scalable resolution.

Authors:  Julien Furrer; Michael John; Horst Kessler; Burkhard Luy
Journal:  J Biomol NMR       Date:  2007-01-19       Impact factor: 2.835

5.  Measurement of residual dipolar couplings from 1Halpha to 13Calpha and 15N using a simple HNCA-based experiment.

Authors:  Perttu Permi
Journal:  J Biomol NMR       Date:  2003-12       Impact factor: 2.835

6.  A comparison of BRCT domains involved in nonhomologous end-joining: introducing the solution structure of the BRCT domain of polymerase lambda.

Authors:  Geoffrey A Mueller; Andrea F Moon; Eugene F Derose; Jody M Havener; Dale A Ramsden; Lars C Pedersen; Robert E London
Journal:  DNA Repair (Amst)       Date:  2008-06-26

7.  Solution structure of polymerase mu's BRCT Domain reveals an element essential for its role in nonhomologous end joining.

Authors:  Eugene F DeRose; Michael W Clarkson; Steven A Gilmore; Cristina J Galban; Ashutosh Tripathy; Jody M Havener; Geoffrey A Mueller; Dale A Ramsden; Robert E London; Andrew L Lee
Journal:  Biochemistry       Date:  2007-10-04       Impact factor: 3.162

8.  Leiomodin creates a leaky cap at the pointed end of actin-thin filaments.

Authors:  Dmitri Tolkatchev; Garry E Smith; Lauren E Schultz; Mert Colpan; Gregory L Helms; John R Cort; Carol C Gregorio; Alla S Kostyukova
Journal:  PLoS Biol       Date:  2020-09-08       Impact factor: 8.029

  8 in total

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