Literature DB >> 30902547

RNA Circularization Diminishes Immunogenicity and Can Extend Translation Duration In Vivo.

R Alexander Wesselhoeft1, Piotr S Kowalski2, Frances C Parker-Hale3, Yuxuan Huang4, Namita Bisaria5, Daniel G Anderson6.   

Abstract

Circular RNAs (circRNAs) are a class of single-stranded RNAs with a contiguous structure that have enhanced stability and a lack of end motifs necessary for interaction with various cellular proteins. Here, we show that unmodified exogenous circRNA is able to bypass cellular RNA sensors and thereby avoid provoking an immune response in RIG-I and Toll-like receptor (TLR) competent cells and in mice. The immunogenicity and protein expression stability of circRNA preparations are found to be dependent on purity, with small amounts of contaminating linear RNA leading to robust cellular immune responses. Unmodified circRNA is less immunogenic than unmodified linear mRNA in vitro, in part due to the evasion of TLR sensing. Finally, we provide the first demonstration to our knowledge of exogenous circRNA delivery and translation in vivo, and we show that circRNA translation is extended in adipose tissue in comparison to unmodified and uridine-modified linear mRNAs.
Copyright © 2019 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  RIG-I; RNA sensors; circular RNA; immunogenicity; protein expression; synthetic

Mesh:

Substances:

Year:  2019        PMID: 30902547      PMCID: PMC6724735          DOI: 10.1016/j.molcel.2019.02.015

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  38 in total

1.  Exon-intron circular RNAs regulate transcription in the nucleus.

Authors:  Zhaoyong Li; Chuan Huang; Chun Bao; Liang Chen; Mei Lin; Xiaolin Wang; Guolin Zhong; Bin Yu; Wanchen Hu; Limin Dai; Pengfei Zhu; Zhaoxia Chang; Qingfa Wu; Yi Zhao; Ya Jia; Ping Xu; Huijie Liu; Ge Shan
Journal:  Nat Struct Mol Biol       Date:  2015-02-09       Impact factor: 15.369

2.  Lipopeptide nanoparticles for potent and selective siRNA delivery in rodents and nonhuman primates.

Authors:  Yizhou Dong; Kevin T Love; J Robert Dorkin; Sasilada Sirirungruang; Yunlong Zhang; Delai Chen; Roman L Bogorad; Hao Yin; Yi Chen; Arturo J Vegas; Christopher A Alabi; Gaurav Sahay; Karsten T Olejnik; Weiheng Wang; Avi Schroeder; Abigail K R Lytton-Jean; Daniel J Siegwart; Akin Akinc; Carmen Barnes; Scott A Barros; Mary Carioto; Kevin Fitzgerald; Julia Hettinger; Varun Kumar; Tatiana I Novobrantseva; June Qin; William Querbes; Victor Koteliansky; Robert Langer; Daniel G Anderson
Journal:  Proc Natl Acad Sci U S A       Date:  2014-02-10       Impact factor: 11.205

3.  Structural Analysis Reveals that Toll-like Receptor 7 Is a Dual Receptor for Guanosine and Single-Stranded RNA.

Authors:  Zhikuan Zhang; Umeharu Ohto; Takuma Shibata; Elena Krayukhina; Masato Taoka; Yoshio Yamauchi; Hiromi Tanji; Toshiaki Isobe; Susumu Uchiyama; Kensuke Miyake; Toshiyuki Shimizu
Journal:  Immunity       Date:  2016-10-11       Impact factor: 31.745

4.  Characterization of RNase R-digested cellular RNA source that consists of lariat and circular RNAs from pre-mRNA splicing.

Authors:  Hitoshi Suzuki; Yuhong Zuo; Jinhua Wang; Michael Q Zhang; Arun Malhotra; Akila Mayeda
Journal:  Nucleic Acids Res       Date:  2006-05-08       Impact factor: 16.971

5.  Efficient backsplicing produces translatable circular mRNAs.

Authors:  Yang Wang; Zefeng Wang
Journal:  RNA       Date:  2014-12-01       Impact factor: 4.942

Review 6.  Advances in the delivery of RNA therapeutics: from concept to clinical reality.

Authors:  James C Kaczmarek; Piotr S Kowalski; Daniel G Anderson
Journal:  Genome Med       Date:  2017-06-27       Impact factor: 11.117

7.  Circ-ZNF609 Is a Circular RNA that Can Be Translated and Functions in Myogenesis.

Authors:  Ivano Legnini; Gaia Di Timoteo; Francesca Rossi; Mariangela Morlando; Francesca Briganti; Olga Sthandier; Alessandro Fatica; Tiziana Santini; Adrian Andronache; Mark Wade; Pietro Laneve; Nikolaus Rajewsky; Irene Bozzoni
Journal:  Mol Cell       Date:  2017-03-23       Impact factor: 17.970

8.  Engineering circular RNA for potent and stable translation in eukaryotic cells.

Authors:  R Alexander Wesselhoeft; Piotr S Kowalski; Daniel G Anderson
Journal:  Nat Commun       Date:  2018-07-06       Impact factor: 14.919

Review 9.  Toll-like receptor signaling pathways.

Authors:  Takumi Kawasaki; Taro Kawai
Journal:  Front Immunol       Date:  2014-09-25       Impact factor: 7.561

10.  Extensive translation of circular RNAs driven by N6-methyladenosine.

Authors:  Yun Yang; Xiaojuan Fan; Miaowei Mao; Xiaowei Song; Ping Wu; Yang Zhang; Yongfeng Jin; Yi Yang; Ling-Ling Chen; Yang Wang; Catherine Cl Wong; Xinshu Xiao; Zefeng Wang
Journal:  Cell Res       Date:  2017-03-10       Impact factor: 25.617

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  78 in total

Review 1.  Guidance of circular RNAs to proteins' behavior as binding partners.

Authors:  Junyun Luo; Hui Liu; Siyu Luan; Zhaoyong Li
Journal:  Cell Mol Life Sci       Date:  2019-07-03       Impact factor: 9.261

Review 2.  Past, present, and future of circRNAs.

Authors:  Ines Lucia Patop; Stas Wüst; Sebastian Kadener
Journal:  EMBO J       Date:  2019-07-25       Impact factor: 11.598

Review 3.  Circular RNAs in Immune Response and Viral Infection.

Authors:  Lichong Yan; Y Grace Chen
Journal:  Trends Biochem Sci       Date:  2020-09-06       Impact factor: 13.807

4.  N6-Methyladenosine Modification Controls Circular RNA Immunity.

Authors:  Y Grace Chen; Robert Chen; Sadeem Ahmad; Rohit Verma; Sudhir Pai Kasturi; Laura Amaya; James P Broughton; Jeewon Kim; Cristhian Cadena; Bali Pulendran; Sun Hur; Howard Y Chang
Journal:  Mol Cell       Date:  2019-08-29       Impact factor: 17.970

5.  DAMP-driven metabolic adaptation.

Authors:  Kirsty Minton
Journal:  Nat Rev Immunol       Date:  2020-01       Impact factor: 53.106

Review 6.  The expanding regulatory mechanisms and cellular functions of circular RNAs.

Authors:  Ling-Ling Chen
Journal:  Nat Rev Mol Cell Biol       Date:  2020-05-04       Impact factor: 94.444

7.  Molecular entrapment by RNA: an emerging tool for disrupting protein-RNA interactions in vivo.

Authors:  Tarjani N Shukla; Jane Song; Zachary T Campbell
Journal:  RNA Biol       Date:  2020-01-28       Impact factor: 4.652

Review 8.  Biogenesis and Functions of Circular RNAs Come into Focus.

Authors:  Mei-Sheng Xiao; Yuxi Ai; Jeremy E Wilusz
Journal:  Trends Cell Biol       Date:  2020-01-20       Impact factor: 20.808

Review 9.  Viral non-coding RNAs: Stealth strategies in the tug-of-war between humans and herpesviruses.

Authors:  Takanobu Tagawa; Anna Serquiña; Insun Kook; Joseph Ziegelbauer
Journal:  Semin Cell Dev Biol       Date:  2020-07-03       Impact factor: 7.727

Review 10.  The RNA modification N6-methyladenosine as a novel regulator of the immune system.

Authors:  Ziv Shulman; Noam Stern-Ginossar
Journal:  Nat Immunol       Date:  2020-04-13       Impact factor: 25.606

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