Literature DB >> 31270581

Guidance of circular RNAs to proteins' behavior as binding partners.

Junyun Luo1, Hui Liu1, Siyu Luan1, Zhaoyong Li2.   

Abstract

Circular RNAs (circRNAs) are single-stranded and covalently closed back-splicing products of pre-mRNAs. They can be derived from exons, introns, or exons with intron retained between exons of transcripts, as well as antisense transcripts. CircRNAs have been reported to function as microRNA sponges, regulate gene transcription mediated by RNA polymerase II, and modulate the splicing or stability of mRNA. However, emerging studies demonstrate that they affect the behavior of proteins via direct interactions with them. Here, we summarize that by binding directly with proteins; circRNAs can facilitate their nuclear or cytoplasmic localizations, regulate their functions or stability, promote or inhibit the interactions between them, or influence the interactions between them and DNA. Furthermore, these circRNA-binding proteins contain transcription factors, RNA processing proteins, proteases, and some other RNA-binding proteins. As a consequence, circRNAs are involved in the regulation of multiple physiological or pathological processes, including tumorigenesis, atherosclerosis, wound repair, cardiac senescence, myocardial ischemia/reperfusion injury, and so forth. Nonetheless, it is worthwhile to further explore more types of proteins that interact with circRNAs, which would be helpful in revealing other unknown biological functions of circRNAs that guide the variation in behavior of cellular proteins.

Entities:  

Keywords:  CircRNA–protein interaction; Circular RNA; Protein function; Protein localization

Mesh:

Substances:

Year:  2019        PMID: 31270581     DOI: 10.1007/s00018-019-03216-z

Source DB:  PubMed          Journal:  Cell Mol Life Sci        ISSN: 1420-682X            Impact factor:   9.261


  82 in total

Review 1.  Argonaute proteins: key players in RNA silencing.

Authors:  Gyorgy Hutvagner; Martin J Simard
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2.  Overexpression of HuR, a nuclear-cytoplasmic shuttling protein, increases the in vivo stability of ARE-containing mRNAs.

Authors:  X C Fan; J A Steitz
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3.  Exon-intron circular RNAs regulate transcription in the nucleus.

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Journal:  Nat Struct Mol Biol       Date:  2015-02-09       Impact factor: 15.369

4.  circRNA biogenesis competes with pre-mRNA splicing.

Authors:  Reut Ashwal-Fluss; Markus Meyer; Nagarjuna Reddy Pamudurti; Andranik Ivanov; Osnat Bartok; Mor Hanan; Naveh Evantal; Sebastian Memczak; Nikolaus Rajewsky; Sebastian Kadener
Journal:  Mol Cell       Date:  2014-09-18       Impact factor: 17.970

5.  Induction of tumor apoptosis through a circular RNA enhancing Foxo3 activity.

Authors:  William W Du; Ling Fang; Weining Yang; Nan Wu; Faryal Mehwish Awan; Zhenguo Yang; Burton B Yang
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6.  The absence of p53 accelerates atherosclerosis by increasing cell proliferation in vivo.

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Journal:  J Cell Biol       Date:  2002-12-16       Impact factor: 10.539

8.  The circRNA circAGFG1 acts as a sponge of miR-195-5p to promote triple-negative breast cancer progression through regulating CCNE1 expression.

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Journal:  Mol Cancer       Date:  2019-01-08       Impact factor: 41.444

Review 9.  Identifying and Characterizing circRNA-Protein Interaction.

Authors:  William W Du; Chao Zhang; Weining Yang; Tianqiao Yong; Faryal Mehwish Awan; Burton B Yang
Journal:  Theranostics       Date:  2017-09-26       Impact factor: 11.556

10.  A Circular RNA Binds To and Activates AKT Phosphorylation and Nuclear Localization Reducing Apoptosis and Enhancing Cardiac Repair.

Authors:  Yan Zeng; William W Du; Yingya Wu; Zhenguo Yang; Faryal Mehwish Awan; Xiangmin Li; Weining Yang; Chao Zhang; Qi Yang; Albert Yee; Yu Chen; Fenghua Yang; Huan Sun; Ren Huang; Albert J Yee; Ren-Ke Li; Zhongkai Wu; Peter H Backx; Burton B Yang
Journal:  Theranostics       Date:  2017-08-29       Impact factor: 11.556

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  13 in total

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Authors:  Feng Pan; Jun Zhang; Benseng Tang; Li Jing; Bing Qiu; Zhengang Zha
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Review 2.  Recent advances in understanding circular RNAs.

Authors:  Constanze Ebermann; Theodor Schnarr; Sabine Müller
Journal:  F1000Res       Date:  2020-06-29

3.  Islet-expressed circular RNAs are associated with type 2 diabetes status in human primary islets and in peripheral blood.

Authors:  Shahnaz Haque; Ryan M Ames; Karen Moore; Benjamin P Lee; Nicola Jeffery; Lorna W Harries
Journal:  BMC Med Genomics       Date:  2020-04-20       Impact factor: 3.063

4.  circRNA‑0006896‑miR1264‑DNMT1 axis plays an important role in carotid plaque destabilization by regulating the behavior of endothelial cells in atherosclerosis.

Authors:  Yan Wen; Yao Chun; Zhong Qing Lian; Zhang Wei Yong; Yang Mei Lan; Liao Huan; Chen Yi Xi; Li Shu Juan; Zhong Wen Qing; Cheng Jia; Zhang Huan Ji
Journal:  Mol Med Rep       Date:  2021-03-02       Impact factor: 2.952

Review 5.  Circular RNAs in Sudden Cardiac Death Related Diseases: Novel Biomarker for Clinical and Forensic Diagnosis.

Authors:  Meihui Tian; Zhipeng Cao; Hao Pang
Journal:  Molecules       Date:  2021-02-21       Impact factor: 4.411

Review 6.  Circular RNA: metabolism, functions and interactions with proteins.

Authors:  Wei-Yi Zhou; Ze-Rong Cai; Jia Liu; De-Shen Wang; Huai-Qiang Ju; Rui-Hua Xu
Journal:  Mol Cancer       Date:  2020-12-14       Impact factor: 27.401

7.  Circular RNA circRNA_0067934 promotes glioma development by modulating the microRNA miR-7/ Wnt/β-catenin axis.

Authors:  Yunlong Pei; Hongying Zhang; Kongye Lu; Xiaojia Tang; Jialing Li; Enpeng Zhang; Jun Zhang; Yujia Huang; Zhijie Yang; Zhenggang Lu; Yuping Li; Hengzhu Zhang; Lun Dong
Journal:  Bioengineered       Date:  2022-03       Impact factor: 3.269

8.  The possible involvement of circRNA DMNT1/p53/JAK/STAT in gestational diabetes mellitus and preeclampsia.

Authors:  Dongqin Bao; Chaohui Zhuang; Yan Jiao; Li Yang
Journal:  Cell Death Discov       Date:  2022-03-16

9.  Circ_0061140 stimulates the malignant development of prostate cancer by targeting miR-1193.

Authors:  Kai Wang; Yi Fan; Ji Sun; Liwei Zhao; Yufu Yu; Gonghui Li
Journal:  Transl Androl Urol       Date:  2021-05

10.  UBAC2 promotes bladder cancer proliferation through BCRC-3/miRNA-182-5p/p27 axis.

Authors:  Chaohui Gu; Keyuan Zhao; Naichun Zhou; Feng Liu; Fei Xie; Shunli Yu; Yongjie Feng; Long Chen; Jinjian Yang; Fengyan Tian; Guosong Jiang
Journal:  Cell Death Dis       Date:  2020-09-10       Impact factor: 8.469

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