Literature DB >> 32900574

Circular RNAs in Immune Response and Viral Infection.

Lichong Yan1, Y Grace Chen2.   

Abstract

Circular RNAs (circRNAs) are a diverse class of RNAs with varying sizes, cellular abundance, and biological functions. Investigations from the past decade have revealed that circRNAs are ubiquitously found in eukaryotes and have defined the different biological roles of circRNAs to illuminate this previously unrecognized class of molecules. In the context of the immune system, immune responses and immune-related diseases alter circRNA expression. More recently, several oncogenic double-stranded DNA viruses have been found to encode circRNAs. In this review, we summarize the current understanding of circRNAs and their emerging functions in immune regulation and autoimmune disorders, and discuss the identification and potential roles of viral circRNAs during infections. Finally, we present promising areas for future investigations in the nascent field of circRNAs.
Copyright © 2020 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  DNA virus; N6-methyladenosine (m(6)A); autoimmune disease; self/non-self; virus-encoded circRNA

Year:  2020        PMID: 32900574      PMCID: PMC7642119          DOI: 10.1016/j.tibs.2020.08.006

Source DB:  PubMed          Journal:  Trends Biochem Sci        ISSN: 0968-0004            Impact factor:   13.807


  95 in total

1.  Cap-independent translation is required for starvation-induced differentiation in yeast.

Authors:  Wendy V Gilbert; Kaihong Zhou; Tamira K Butler; Jennifer A Doudna
Journal:  Science       Date:  2007-08-31       Impact factor: 47.728

2.  Initiation of protein synthesis by the eukaryotic translational apparatus on circular RNAs.

Authors:  C Y Chen; P Sarnow
Journal:  Science       Date:  1995-04-21       Impact factor: 47.728

3.  Analysis of intron sequences reveals hallmarks of circular RNA biogenesis in animals.

Authors:  Andranik Ivanov; Sebastian Memczak; Emanuel Wyler; Francesca Torti; Hagit T Porath; Marta R Orejuela; Michael Piechotta; Erez Y Levanon; Markus Landthaler; Christoph Dieterich; Nikolaus Rajewsky
Journal:  Cell Rep       Date:  2014-12-31       Impact factor: 9.423

4.  Exon-intron circular RNAs regulate transcription in the nucleus.

Authors:  Zhaoyong Li; Chuan Huang; Chun Bao; Liang Chen; Mei Lin; Xiaolin Wang; Guolin Zhong; Bin Yu; Wanchen Hu; Limin Dai; Pengfei Zhu; Zhaoxia Chang; Qingfa Wu; Yi Zhao; Ya Jia; Ping Xu; Huijie Liu; Ge Shan
Journal:  Nat Struct Mol Biol       Date:  2015-02-09       Impact factor: 15.369

5.  circRNA biogenesis competes with pre-mRNA splicing.

Authors:  Reut Ashwal-Fluss; Markus Meyer; Nagarjuna Reddy Pamudurti; Andranik Ivanov; Osnat Bartok; Mor Hanan; Naveh Evantal; Sebastian Memczak; Nikolaus Rajewsky; Sebastian Kadener
Journal:  Mol Cell       Date:  2014-09-18       Impact factor: 17.970

6.  Loss of a mammalian circular RNA locus causes miRNA deregulation and affects brain function.

Authors:  Monika Piwecka; Petar Glažar; Luis R Hernandez-Miranda; Sebastian Memczak; Susanne A Wolf; Agnieszka Rybak-Wolf; Andrei Filipchyk; Filippos Klironomos; Cledi Alicia Cerda Jara; Pascal Fenske; Thorsten Trimbuch; Vera Zywitza; Mireya Plass; Luisa Schreyer; Salah Ayoub; Christine Kocks; Ralf Kühn; Christian Rosenmund; Carmen Birchmeier; Nikolaus Rajewsky
Journal:  Science       Date:  2017-08-10       Impact factor: 47.728

7.  Genome-Wide Maps of m6A circRNAs Identify Widespread and Cell-Type-Specific Methylation Patterns that Are Distinct from mRNAs.

Authors:  Chan Zhou; Benoit Molinie; Kaveh Daneshvar; Joshua V Pondick; Jinkai Wang; Nicholas Van Wittenberghe; Yi Xing; Cosmas C Giallourakis; Alan C Mullen
Journal:  Cell Rep       Date:  2017-08-29       Impact factor: 9.423

Review 8.  Circular RNA in cardiovascular disease.

Authors:  M-Ashraf Altesha; Tiffany Ni; Afaan Khan; Kexiang Liu; Xiufen Zheng
Journal:  J Cell Physiol       Date:  2018-10-20       Impact factor: 6.384

9.  N6-methyladenosine-dependent regulation of messenger RNA stability.

Authors:  Xiao Wang; Zhike Lu; Adrian Gomez; Gary C Hon; Yanan Yue; Dali Han; Ye Fu; Marc Parisien; Qing Dai; Guifang Jia; Bing Ren; Tao Pan; Chuan He
Journal:  Nature       Date:  2013-11-27       Impact factor: 49.962

10.  The Epstein Barr virus circRNAome.

Authors:  Nathan Ungerleider; Monica Concha; Zhen Lin; Claire Roberts; Xia Wang; Subing Cao; Melody Baddoo; Walter N Moss; Yi Yu; Michael Seddon; Terri Lehman; Scott Tibbetts; Rolf Renne; Yan Dong; Erik K Flemington
Journal:  PLoS Pathog       Date:  2018-08-06       Impact factor: 6.823

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  18 in total

1.  Circular RNA circNEURL4 inhibits cell proliferation and invasion of papillary thyroid carcinoma by sponging miR-1278 and regulating LATS1 expression.

Authors:  Wei Ding; Ying Shi; Hong Zhang
Journal:  Am J Transl Res       Date:  2021-06-15       Impact factor: 4.060

2.  circRNA expression patterns and circRNA-miRNA-mRNA networks during CV-A16 infection of SH-SY5Y cells.

Authors:  Yajie Hu; Ruian Yang; Wei Zhao; Chen Liu; Yan Tan; Dandan Pu; Jie Song; Yunhui Zhang
Journal:  Arch Virol       Date:  2021-08-19       Impact factor: 2.574

3.  circFAM120B functions as a tumor suppressor in esophageal squamous cell carcinoma via the miR-661/PPM1L axis and the PKR/p38 MAPK/EMT pathway.

Authors:  Huan Song; Dan Tian; Jian Sun; Xuhua Mao; Weimin Kong; Dian Xu; Ye Ji; Beibei Qiu; Mengyao Zhan; Jianming Wang
Journal:  Cell Death Dis       Date:  2022-04-18       Impact factor: 9.685

4.  Comprehensive analysis of circRNA expression profiles and circRNA-associated competing endogenous RNA networks in IgA nephropathy.

Authors:  Haiyang Liu; Di Liu; Yexin Liu; Ming Xia; Yan Li; Mei Li; Hong Liu
Journal:  PeerJ       Date:  2020-12-03       Impact factor: 2.984

5.  Identification of a circRNA-miRNA-mRNA regulatory network for exploring novel therapeutic options for glioma.

Authors:  Yi He; Yihong Chen; Yuxin Tong; Wenyong Long; Qing Liu
Journal:  PeerJ       Date:  2021-08-06       Impact factor: 2.984

6.  Circular RNA FOXP1 Induced by ZNF263 Upregulates U2AF2 Expression to Accelerate Renal Cell Carcinoma Tumorigenesis and Warburg Effect through Sponging miR-423-5p.

Authors:  Li Fang; Ting Ye; Yanmei An
Journal:  J Immunol Res       Date:  2021-09-03       Impact factor: 4.818

7.  The circRNA circSIAE Inhibits Replication of Coxsackie Virus B3 by Targeting miR-331-3p and Thousand and One Amino-Acid Kinase 2.

Authors:  Qingru Yang; Yuhan Li; Yan Wang; Xiaorong Qiao; Tingjun Liu; Hua Wang; Hongxing Shen
Journal:  Front Cell Infect Microbiol       Date:  2022-01-24       Impact factor: 5.293

Review 8.  Novel insights into the interaction between N6-methyladenosine modification and circular RNA.

Authors:  Tao Xu; Bangshun He; Huiling Sun; Mengqiu Xiong; Junjie Nie; Shukui Wang; Yuqin Pan
Journal:  Mol Ther Nucleic Acids       Date:  2022-01-10       Impact factor: 8.886

9.  Identification of Key CircRNAs Related to Pulmonary Tuberculosis Based on Bioinformatics Analysis.

Authors:  Qin Yuan; Zilu Wen; Ke Yang; Shulin Zhang; Ning Zhang; Yanzheng Song; Fuxue Chen
Journal:  Biomed Res Int       Date:  2022-04-04       Impact factor: 3.411

10.  SARS-CoV-2 Nsp14 mediates the effects of viral infection on the host cell transcriptome.

Authors:  Michela Zaffagni; Jenna M Harris; Ines L Patop; Nagarjuna Reddy Pamudurti; Sinead Nguyen; Sebastian Kadener
Journal:  Elife       Date:  2022-03-16       Impact factor: 8.713

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