Literature DB >> 32366901

The expanding regulatory mechanisms and cellular functions of circular RNAs.

Ling-Ling Chen1,2.   

Abstract

Many protein-coding genes in higher eukaryotes can produce circular RNAs (circRNAs) through back-splicing of exons. CircRNAs differ from mRNAs in their production, structure and turnover and thereby have unique cellular functions and potential biomedical applications. In this Review, I discuss recent progress in our understanding of the biogenesis of circRNAs and the regulation of their abundance and of their biological functions, including in transcription and splicing, sequestering or scaffolding of macromolecules to interfere with microRNA activities or signalling pathways, and serving as templates for translation. I further discuss the emerging roles of circRNAs in regulating immune responses and cell proliferation, and the possibilities of applying circRNA technologies in biomedical research.

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Year:  2020        PMID: 32366901     DOI: 10.1038/s41580-020-0243-y

Source DB:  PubMed          Journal:  Nat Rev Mol Cell Biol        ISSN: 1471-0072            Impact factor:   94.444


  156 in total

Review 1.  Mechanisms of alternative pre-messenger RNA splicing.

Authors:  Douglas L Black
Journal:  Annu Rev Biochem       Date:  2003-02-27       Impact factor: 23.643

2.  Viroids are single-stranded covalently closed circular RNA molecules existing as highly base-paired rod-like structures.

Authors:  H L Sanger; G Klotz; D Riesner; H J Gross; A K Kleinschmidt
Journal:  Proc Natl Acad Sci U S A       Date:  1976-11       Impact factor: 11.205

3.  Scrambled exons.

Authors:  J M Nigro; K R Cho; E R Fearon; S E Kern; J M Ruppert; J D Oliner; K W Kinzler; B Vogelstein
Journal:  Cell       Date:  1991-02-08       Impact factor: 41.582

4.  Mis-splicing yields circular RNA molecules.

Authors:  C Cocquerelle; B Mascrez; D Hétuin; B Bailleul
Journal:  FASEB J       Date:  1993-01       Impact factor: 5.191

Review 5.  The Biogenesis, Functions, and Challenges of Circular RNAs.

Authors:  Xiang Li; Li Yang; Ling-Ling Chen
Journal:  Mol Cell       Date:  2018-07-26       Impact factor: 17.970

Review 6.  Expansion of the eukaryotic proteome by alternative splicing.

Authors:  Timothy W Nilsen; Brenton R Graveley
Journal:  Nature       Date:  2010-01-28       Impact factor: 49.962

7.  Circular intronic long noncoding RNAs.

Authors:  Yang Zhang; Xiao-Ou Zhang; Tian Chen; Jian-Feng Xiang; Qing-Fei Yin; Yu-Hang Xing; Shanshan Zhu; Li Yang; Ling-Ling Chen
Journal:  Mol Cell       Date:  2013-09-12       Impact factor: 17.970

Review 8.  Circular RNAs: diversity of form and function.

Authors:  Erika Lasda; Roy Parker
Journal:  RNA       Date:  2014-12       Impact factor: 4.942

9.  Splicing with inverted order of exons occurs proximal to large introns.

Authors:  C Cocquerelle; P Daubersies; M A Majérus; J P Kerckaert; B Bailleul
Journal:  EMBO J       Date:  1992-03       Impact factor: 11.598

10.  Circular transcripts of the testis-determining gene Sry in adult mouse testis.

Authors:  B Capel; A Swain; S Nicolis; A Hacker; M Walter; P Koopman; P Goodfellow; R Lovell-Badge
Journal:  Cell       Date:  1993-06-04       Impact factor: 41.582

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  266 in total

1.  CircRNAs in lifespan.

Authors:  Kim Baumann
Journal:  Nat Rev Mol Cell Biol       Date:  2020-08       Impact factor: 94.444

Review 2.  A narrative review of circular RNAs as potential biomarkers and therapeutic targets for cardiovascular diseases.

Authors:  Chi Liu; Nan Li; Guifeng Dai; Omer Cavdar; Hong Fang
Journal:  Ann Transl Med       Date:  2021-04

Review 3.  Expression and function of circular RNAs in the mammalian brain.

Authors:  Kaiyu Xu; Ying Zhang; Jiali Li
Journal:  Cell Mol Life Sci       Date:  2021-02-08       Impact factor: 9.261

Review 4.  RNA structure probing uncovers RNA structure-dependent biological functions.

Authors:  Xi-Wen Wang; Chu-Xiao Liu; Ling-Ling Chen; Qiangfeng Cliff Zhang
Journal:  Nat Chem Biol       Date:  2021-06-25       Impact factor: 15.040

5.  Use of circular RNAs as markers of readthrough transcription to identify factors regulating cleavage/polyadenylation events.

Authors:  Dongming Liang; Deirdre C Tatomer; Jeremy E Wilusz
Journal:  Methods       Date:  2021-04-18       Impact factor: 3.608

Review 6.  Best practices to ensure robust investigation of circular RNAs: pitfalls and tips.

Authors:  Samantha Dodbele; Nebibe Mutlu; Jeremy E Wilusz
Journal:  EMBO Rep       Date:  2021-02-25       Impact factor: 8.807

Review 7.  The design and synthesis of circular RNAs.

Authors:  Prisca Obi; Y Grace Chen
Journal:  Methods       Date:  2021-03-02       Impact factor: 3.608

Review 8.  Fast and furious: insights of back splicing regulation during nascent RNA synthesis.

Authors:  Wei Xue; Xu-Kai Ma; Li Yang
Journal:  Sci China Life Sci       Date:  2021-02-09       Impact factor: 6.038

Review 9.  Squaring the circle: circRNAs in melanoma.

Authors:  Nicol Mecozzi; Olga Vera; Florian A Karreth
Journal:  Oncogene       Date:  2021-07-30       Impact factor: 9.867

10.  Identification of Enzalutamide Resistance-Related circRNA-miRNA-mRNA Regulatory Networks in Patients with Prostate Cancer.

Authors:  JunJie Yu; Si Sun; WeiPu Mao; Bin Xu; Ming Chen
Journal:  Onco Targets Ther       Date:  2021-06-21       Impact factor: 4.147

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