Literature DB >> 31474572

N6-Methyladenosine Modification Controls Circular RNA Immunity.

Y Grace Chen1, Robert Chen2, Sadeem Ahmad3, Rohit Verma4, Sudhir Pai Kasturi5, Laura Amaya2, James P Broughton2, Jeewon Kim6, Cristhian Cadena3, Bali Pulendran4, Sun Hur3, Howard Y Chang7.   

Abstract

Circular RNAs (circRNAs) are prevalent in eukaryotic cells and viral genomes. Mammalian cells possess innate immunity to detect foreign circRNAs, but the molecular basis of self versus foreign identity in circRNA immunity is unknown. Here, we show that N6-methyladenosine (m6A) RNA modification on human circRNAs inhibits innate immunity. Foreign circRNAs are potent adjuvants to induce antigen-specific T cell activation, antibody production, and anti-tumor immunity in vivo, and m6A modification abrogates immune gene activation and adjuvant activity. m6A reader YTHDF2 sequesters m6A-circRNA and is essential for suppression of innate immunity. Unmodified circRNA, but not m6A-modified circRNA, directly activates RNA pattern recognition receptor RIG-I in the presence of lysine-63-linked polyubiquitin chain to cause filamentation of the adaptor protein MAVS and activation of the downstream transcription factor IRF3. CircRNA immunity has considerable parallel to prokaryotic DNA restriction modification system that transforms nucleic acid chemical modification into organismal innate immunity.
Copyright © 2019 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  N6-methyladenosine; RIG-I; YTHDF; cancer immunotherapy; circular RNA; self/non-self; vaccine

Mesh:

Substances:

Year:  2019        PMID: 31474572      PMCID: PMC6778039          DOI: 10.1016/j.molcel.2019.07.016

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  46 in total

1.  RIG-I forms signaling-competent filaments in an ATP-dependent, ubiquitin-independent manner.

Authors:  Alys Peisley; Bin Wu; Hui Yao; Thomas Walz; Sun Hur
Journal:  Mol Cell       Date:  2013-08-29       Impact factor: 17.970

2.  m(6)A RNA modification controls cell fate transition in mammalian embryonic stem cells.

Authors:  Pedro J Batista; Benoit Molinie; Jinkai Wang; Kun Qu; Jiajing Zhang; Lingjie Li; Donna M Bouley; Ernesto Lujan; Bahareh Haddad; Kaveh Daneshvar; Ava C Carter; Ryan A Flynn; Chan Zhou; Kok-Seong Lim; Peter Dedon; Marius Wernig; Alan C Mullen; Yi Xing; Cosmas C Giallourakis; Howard Y Chang
Journal:  Cell Stem Cell       Date:  2014-10-16       Impact factor: 24.633

3.  The hepatitis delta (delta) virus possesses a circular RNA.

Authors:  A Kos; R Dijkema; A C Arnberg; P H van der Meide; H Schellekens
Journal:  Nature       Date:  1986 Oct 9-15       Impact factor: 49.962

4.  Sensing Self and Foreign Circular RNAs by Intron Identity.

Authors:  Y Grace Chen; Myoungjoo V Kim; Xingqi Chen; Pedro J Batista; Saeko Aoyama; Jeremy E Wilusz; Akiko Iwasaki; Howard Y Chang
Journal:  Mol Cell       Date:  2017-06-15       Impact factor: 17.970

Review 5.  Dynamic RNA Modifications in Gene Expression Regulation.

Authors:  Ian A Roundtree; Molly E Evans; Tao Pan; Chuan He
Journal:  Cell       Date:  2017-06-15       Impact factor: 41.582

6.  Ubiquitin-induced oligomerization of the RNA sensors RIG-I and MDA5 activates antiviral innate immune response.

Authors:  Xiaomo Jiang; Lisa N Kinch; Chad A Brautigam; Xiang Chen; Fenghe Du; Nick V Grishin; Zhijian J Chen
Journal:  Immunity       Date:  2012-06-14       Impact factor: 31.745

7.  Structural basis for m7G recognition and 2'-O-methyl discrimination in capped RNAs by the innate immune receptor RIG-I.

Authors:  Swapnil C Devarkar; Chen Wang; Matthew T Miller; Anand Ramanathan; Fuguo Jiang; Abdul G Khan; Smita S Patel; Joseph Marcotrigiano
Journal:  Proc Natl Acad Sci U S A       Date:  2016-01-05       Impact factor: 11.205

8.  Circular RNAs are the predominant transcript isoform from hundreds of human genes in diverse cell types.

Authors:  Julia Salzman; Charles Gawad; Peter Lincoln Wang; Norman Lacayo; Patrick O Brown
Journal:  PLoS One       Date:  2012-02-01       Impact factor: 3.240

9.  N6-methyladenosine-dependent regulation of messenger RNA stability.

Authors:  Xiao Wang; Zhike Lu; Adrian Gomez; Gary C Hon; Yanan Yue; Dali Han; Ye Fu; Marc Parisien; Qing Dai; Guifang Jia; Bing Ren; Tao Pan; Chuan He
Journal:  Nature       Date:  2013-11-27       Impact factor: 49.962

10.  Topology of the human and mouse m6A RNA methylomes revealed by m6A-seq.

Authors:  Dan Dominissini; Sharon Moshitch-Moshkovitz; Schraga Schwartz; Mali Salmon-Divon; Lior Ungar; Sivan Osenberg; Karen Cesarkas; Jasmine Jacob-Hirsch; Ninette Amariglio; Martin Kupiec; Rotem Sorek; Gideon Rechavi
Journal:  Nature       Date:  2012-04-29       Impact factor: 49.962

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  157 in total

1.  Circular RNA circPIKfyve acts as a sponge of miR-21-3p to enhance antiviral immunity through regulating MAVS in teleost fish.

Authors:  Hui Su; Qing Chu; Weiwei Zheng; Renjie Chang; Wenya Gao; Lei Zhang; Tianjun Xu
Journal:  J Virol       Date:  2021-02-03       Impact factor: 5.103

2.  m6A Modification Prevents Formation of Endogenous Double-Stranded RNAs and Deleterious Innate Immune Responses during Hematopoietic Development.

Authors:  Yimeng Gao; Radovan Vasic; Yuanbin Song; Rhea Teng; Chengyang Liu; Rana Gbyli; Giulia Biancon; Raman Nelakanti; Kirsten Lobben; Eriko Kudo; Wei Liu; Anastasia Ardasheva; Xiaoying Fu; Xiaman Wang; Poorval Joshi; Veronica Lee; Burak Dura; Gabriella Viero; Akiko Iwasaki; Rong Fan; Andrew Xiao; Richard A Flavell; Hua-Bing Li; Toma Tebaldi; Stephanie Halene
Journal:  Immunity       Date:  2020-06-03       Impact factor: 31.745

Review 3.  Circular RNAs in Immune Response and Viral Infection.

Authors:  Lichong Yan; Y Grace Chen
Journal:  Trends Biochem Sci       Date:  2020-09-06       Impact factor: 13.807

4.  DAMP-driven metabolic adaptation.

Authors:  Kirsty Minton
Journal:  Nat Rev Immunol       Date:  2020-01       Impact factor: 53.106

Review 5.  The expanding regulatory mechanisms and cellular functions of circular RNAs.

Authors:  Ling-Ling Chen
Journal:  Nat Rev Mol Cell Biol       Date:  2020-05-04       Impact factor: 94.444

Review 6.  Role of circular RNAs in brain development and CNS diseases.

Authors:  Suresh L Mehta; Robert J Dempsey; Raghu Vemuganti
Journal:  Prog Neurobiol       Date:  2020-01-10       Impact factor: 11.685

Review 7.  m6A Modification in Coding and Non-coding RNAs: Roles and Therapeutic Implications in Cancer.

Authors:  Huilin Huang; Hengyou Weng; Jianjun Chen
Journal:  Cancer Cell       Date:  2020-03-16       Impact factor: 31.743

Review 8.  Biogenesis and Functions of Circular RNAs Come into Focus.

Authors:  Mei-Sheng Xiao; Yuxi Ai; Jeremy E Wilusz
Journal:  Trends Cell Biol       Date:  2020-01-20       Impact factor: 20.808

Review 9.  Filament-like Assemblies of Intracellular Nucleic Acid Sensors: Commonalities and Differences.

Authors:  Cristhian Cadena; Sun Hur
Journal:  Mol Cell       Date:  2019-10-17       Impact factor: 17.970

Review 10.  Regulation of cGAS- and RLR-mediated immunity to nucleic acids.

Authors:  Andrea Ablasser; Sun Hur
Journal:  Nat Immunol       Date:  2019-12-09       Impact factor: 25.606

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