Literature DB >> 32631785

Viral non-coding RNAs: Stealth strategies in the tug-of-war between humans and herpesviruses.

Takanobu Tagawa1, Anna Serquiña1, Insun Kook1, Joseph Ziegelbauer2.   

Abstract

Oncogenic DNA viruses establish lifelong infections in humans, and they cause cancers, often in immunocompromised patients, despite anti-viral immune surveillance targeted against viral antigens. High-throughput sequencing techniques allowed the field to identify novel viral non-coding RNAs (ncRNAs). ncRNAs are ideal factors for DNA viruses to exploit; they are non-immunogenic to T cells, thus viral ncRNAs can manipulate host cells without evoking adaptive immune responses. Viral ncRNAs may still trigger the host innate immune response, but many viruses encode decoys/inhibitors to counter-act and evade recognition. In addition, ncRNAs can be secreted to the extracellular space and influence adjacent cells to create a pro-viral microenvironment. In this review, we present recent progress in understanding interactions between oncoviruses and ncRNAs including small and long ncRNAs, microRNAs, and recently identified viral circular RNAs. In addition, potential clinical applications for ncRNA will be discussed. Extracellular ncRNAs are suggested to be diagnostic and prognostic biomarkers and, with the realization of the importance of viral ncRNAs in tumorigenesis, approaches to target critical viral ncRNAs are emerging. Further understanding of viral utilization of ncRNAs will advance anti-viral therapeutics beyond conventional medication and vaccination.
Copyright © 2020. Published by Elsevier Ltd.

Entities:  

Keywords:  Circular RNA; Herpesvirus; Immune evasion; Non-coding RNA; Tumorigenesis; microRNA

Mesh:

Substances:

Year:  2020        PMID: 32631785      PMCID: PMC7779692          DOI: 10.1016/j.semcdb.2020.06.015

Source DB:  PubMed          Journal:  Semin Cell Dev Biol        ISSN: 1084-9521            Impact factor:   7.727


  161 in total

1.  Nuclear import of cytoplasmic poly(A) binding protein restricts gene expression via hyperadenylation and nuclear retention of mRNA.

Authors:  G Renuka Kumar; Britt A Glaunsinger
Journal:  Mol Cell Biol       Date:  2010-09-07       Impact factor: 4.272

2.  Abundant expression of EBER1 small nuclear RNA in nasopharyngeal carcinoma. A morphologically distinctive target for detection of Epstein-Barr virus in formalin-fixed paraffin-embedded carcinoma specimens.

Authors:  T C Wu; R B Mann; J I Epstein; E MacMahon; W A Lee; P Charache; S D Hayward; R J Kurman; G S Hayward; R F Ambinder
Journal:  Am J Pathol       Date:  1991-06       Impact factor: 4.307

3.  Kaposi's sarcoma-associated herpesvirus encodes an ortholog of miR-155.

Authors:  Rebecca L Skalsky; Mark A Samols; Karlie B Plaisance; Isaac W Boss; Alberto Riva; M Cecilia Lopez; Henry V Baker; Rolf Renne
Journal:  J Virol       Date:  2007-09-19       Impact factor: 5.103

4.  circRNA biogenesis competes with pre-mRNA splicing.

Authors:  Reut Ashwal-Fluss; Markus Meyer; Nagarjuna Reddy Pamudurti; Andranik Ivanov; Osnat Bartok; Mor Hanan; Naveh Evantal; Sebastian Memczak; Nikolaus Rajewsky; Sebastian Kadener
Journal:  Mol Cell       Date:  2014-09-18       Impact factor: 17.970

5.  Tracking expression and subcellular localization of RNA and protein species using high-throughput single cell imaging flow cytometry.

Authors:  Sumit Borah; Lisa A Nichols; Lynn M Hassman; Dean H Kedes; Joan A Steitz
Journal:  RNA       Date:  2012-06-28       Impact factor: 4.942

6.  EBV miRNA expression profiles in different infection stages: A prospective cohort study.

Authors:  Anita Hartung; Oliwia Makarewicz; Renate Egerer; Matthias Karrasch; Anne Klink; Andreas Sauerbrei; Karim Kentouche; Mathias W Pletz
Journal:  PLoS One       Date:  2019-02-13       Impact factor: 3.240

7.  Genome-wide Transcript Structure Resolution Reveals Abundant Alternate Isoform Usage from Murine Gammaherpesvirus 68.

Authors:  Tina O'Grady; April Feswick; Brett A Hoffman; Yiping Wang; Eva M Medina; Mehmet Kara; Linda F van Dyk; Erik K Flemington; Scott A Tibbetts
Journal:  Cell Rep       Date:  2019-06-25       Impact factor: 9.423

8.  Expression and processing of a small nucleolar RNA from the Epstein-Barr virus genome.

Authors:  Roland Hutzinger; Regina Feederle; Jan Mrazek; Natalia Schiefermeier; Piotr J Balwierz; Mihaela Zavolan; Norbert Polacek; Henri-Jacques Delecluse; Alexander Hüttenhofer
Journal:  PLoS Pathog       Date:  2009-08-14       Impact factor: 6.823

Review 9.  Interferon-inducible antiviral effectors.

Authors:  Anthony J Sadler; Bryan R G Williams
Journal:  Nat Rev Immunol       Date:  2008-07       Impact factor: 53.106

Review 10.  Post-translational Control of Innate Immune Signaling Pathways by Herpesviruses.

Authors:  Jessica Carriere; Youliang Rao; Qizhi Liu; Xiaoxi Lin; Jun Zhao; Pinghui Feng
Journal:  Front Microbiol       Date:  2019-11-14       Impact factor: 5.640

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  10 in total

Review 1.  Human Identical Sequences, hyaluronan, and hymecromone ─ the new mechanism and management of COVID-19.

Authors:  Shuai Yang; Ying Tong; Lu Chen; Wenqiang Yu
Journal:  Mol Biomed       Date:  2022-05-20

Review 2.  Identifying and characterizing virus-encoded circular RNAs.

Authors:  Takanobu Tagawa; Vishal N Kopardé; Joseph M Ziegelbauer
Journal:  Methods       Date:  2021-03-11       Impact factor: 3.608

Review 3.  Human cytomegalovirus (HCMV)-encoded microRNAs: potential biomarkers and clinical applications.

Authors:  Raquel Fernández-Moreno; Julián Torre-Cisneros; Sara Cantisán
Journal:  RNA Biol       Date:  2021-05-26       Impact factor: 4.766

4.  Molecular Mechanisms of Kaposi Sarcoma Development.

Authors:  Andy Karabajakian; Isabelle Ray-Coquard; Jean-Yves Blay
Journal:  Cancers (Basel)       Date:  2022-04-07       Impact factor: 6.575

5.  MicroRNA-mediated regulation of lipid metabolism in virus-infected Emiliania huxleyi.

Authors:  Enquan Zhang; Jingjing Gao; Zehua Wei; Jun Zeng; Jian Li; Guiling Li; Jingwen Liu
Journal:  ISME J       Date:  2022-07-22       Impact factor: 11.217

Review 6.  Viral Manipulation of the Host Epigenome as a Driver of Virus-Induced Oncogenesis.

Authors:  Shimaa Hassan AbdelAziz Soliman; Arturo Orlacchio; Fabio Verginelli
Journal:  Microorganisms       Date:  2021-05-30

7.  Characterizing Expression and Regulation of Gamma-Herpesviral Circular RNAs.

Authors:  Takanobu Tagawa; Daniel Oh; Jerico Santos; Sarah Dremel; Guruswamy Mahesh; Thomas S Uldrick; Robert Yarchoan; Vishal N Kopardé; Joseph M Ziegelbauer
Journal:  Front Microbiol       Date:  2021-06-30       Impact factor: 5.640

Review 8.  Stealing the Show: KSHV Hijacks Host RNA Regulatory Pathways to Promote Infection.

Authors:  Daniel Macveigh-Fierro; William Rodriguez; Jacob Miles; Mandy Muller
Journal:  Viruses       Date:  2020-09-14       Impact factor: 5.048

Review 9.  Non-Coding RNAs: Strategy for Viruses' Offensive.

Authors:  Alessia Gallo; Matteo Bulati; Vitale Miceli; Nicola Amodio; Pier Giulio Conaldi
Journal:  Noncoding RNA       Date:  2020-09-10

10.  The m6A landscape of polyadenylated nuclear (PAN) RNA and its related methylome in the context of KSHV replication.

Authors:  Sarah Elizabeth Martin; Huachen Gan; Gabriela Toomer; Nikitha Sridhar; Joanna Sztuba-Solinska
Journal:  RNA       Date:  2021-06-29       Impact factor: 5.636

  10 in total

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