Oriented single-crystal nuclear resonance vibrational spectroscopy (NRVS) has been used to obtain all iron vibrations in two {FeNO}(6) porphyrinate complexes, five-coordinate [Fe(OEP)(NO)]ClO4 and six-coordinate [Fe(OEP)(2-MeHIm)(NO)]ClO4. A new crystal structure was required for measurements of [Fe(OEP)(2-MeHIm)(NO)]ClO4, and the new structure is reported herein. Single crystals of both complexes were oriented to be either parallel or perpendicular to the porphyrin plane and/or axial imidazole ligand plane. Thus, the FeNO bending and stretching modes can now be unambiguously assigned; the pattern of shifts in frequency as a function of coordination number can also be determined. The pattern is quite distinct from those found for CO or {FeNO}(7) heme species. This is the result of unchanging Fe-N(NO) bonding interactions in the {FeNO}(6) species, in distinct contrast to the other diatomic ligand species. DFT calculations were also used to obtain detailed predictions of vibrational modes. Predictions were consistent with the intensity and character found in the experimental spectra. The NRVS data allow the assignment and observation of the challenging to obtain Fe-Im stretch in six-coordinate heme derivatives. NRVS data for this and related six-coordinate hemes with the diatomic ligands CO, NO, and O2 reveal a strong correlation between the Fe-Im stretch and Fe-N(Im) bond distance that is detailed for the first time.
Oriented single-crystal nuclear resonance vibrational spectroscopy (NRVS) has been used to obtain all iron vibrations in two {FeNO}(6) porphyrinate complexes, five-coordinate [Fe(OEP)(NO)]ClO4 and six-coordinate [Fe(OEP)(2-MeHIm)(NO)]ClO4. A new crystal structure was required for measurements of [Fe(OEP)(2-MeHIm)(NO)]ClO4, and the new structure is reported herein. Single crystals of both complexes were oriented to be either parallel or perpendicular to the porphyrin plane and/or axial imidazole ligand plane. Thus, the FeNO bending and stretching modes can now be unambiguously assigned; the pattern of shifts in frequency as a function of coordination number can also be determined. The pattern is quite distinct from those found for CO or {FeNO}(7) heme species. This is the result of unchanging Fe-N(NO) bonding interactions in the {FeNO}(6) species, in distinct contrast to the other diatomic ligand species. DFT calculations were also used to obtain detailed predictions of vibrational modes. Predictions were consistent with the intensity and character found in the experimental spectra. The NRVS data allow the assignment and observation of the challenging to obtain Fe-Im stretch in six-coordinate heme derivatives. NRVS data for this and related six-coordinate hemes with the diatomic ligands CO, NO, and O2 reveal a strong correlation between the Fe-Im stretch and Fe-N(Im) bond distance that is detailed for the first time.
Nitric oxide (NO) is
one of three important diatomic ligands (NO,
CO, and O2) that interact with iron porphyrinates.[1] Although the ligands have many common attributes,
each ligand can form complexes that have distinct characteristics,
and many biological systems are able to distinguish among the three
diatomics.[2−5] Uniquely, NO is the only one of the three that will react with iron
porphyrinates in both the iron(II) and the iron(III) states. The strong
interest in NO as a ligand has led to many investigations and reviews.[6] In addition, the important properties of NO in
biology as a messenger and as an immune defense agent are especially
significant in the {FeNO}7 heme systems.[7,9−20] The five- and six-coordinate {FeNO}7 complexes have been
studied in some detail;[21] their electronic
structures are reasonably well understood and will not be considered
further here.The iron(III) systems ({FeNO}6) have
been less intensely
studied but also have substantial biological interest especially as
insect carriers of NO[22] and in denitrification
processes.[23,24] Both five- and six-coordinate
species are known. Experimentally, the relatively easy loss of NO
from both solutions and solid samples of {FeNO}6 complexes,
even though the Fe–N(NO) bond is very short (1.64–1.65
Å),[25,26] and easy reductive nitrosylation to {FeNO}7 species has made syntheses and characterization challenging.[27] The NO stretching frequency for five-coordinate
[Fe(OEP)(NO)]+[28] derivatives
ranges from 1830 to 1868 cm–1.[29−31] Early characterization
revealed unusual spectroscopic properties for six-coordinate species
of the type [Fe(Porph)(L)(NO)]+, where L is a neutral nitrogendonor such as imidazole or other nitrogen heterocycle. These species
had NO stretching frequencies in range of 1890–1921 cm–1, thus bracketing the value of free NO (1876 cm–1).[27] The Mössbauer
spectra of the five-coordinate species showed relatively low isomer
shifts of ∼0.20 mm/s,[25] whereas
the six-coordinate species had unusually low values, ∼0 mm/s,[25] a value in hemes that is usually associated
with the oxidation state of +4 for iron.[32] Thus, a description of electronic structures of these seems challenging,
an issue to which we will subsequently return. We do note that there
are some substantial similarities between the reactions of O2 and NO with hemes, in particular an unusual spin coupling of paramagnetic
reactants. In dioxygen systems, diamagnetic dioxygen complexes are
formed from high-spin five-coordinate iron(II) hemes and paramagnetic
dioxygen;[33] their description has been
contentious to this day.[34] In the case
of the [Fe(Porph)(R–Im)(NO)]+ species, reaction
of a high-spin five-coordinate [Fe(Porph)(R–Im)]+ and paramagnetic NO also forms diamagnetic complexes.The
reported vibrational spectra of six-coordinate [Fe(Porph)(R–Im)(NO)]+ either as proteins or as small molecules have assigned both
the Fe–N(NO) stretch and the Fe–N–O bend.[35−38] In all but one case, the stretch is assigned at a higher frequency
than the bend. The Fe–N–O bend should be readily distinguished
from the stretching mode by two (near) degenerate transitions for
the bend; the degeneracy is lifted by the presence of the planar trans
ligand. However, the resolution of the bending modes has not been
achieved experimentally. Definitive assignments should be obtained
by the application of oriented crystal NRVS spectra, which we have
recently pioneered[39−42] and which provides detailed orientational, vibrational information.
The reported crystallographic properties of five-coordinate {FeNO}6 species are appropriate for single-crystal NRVS measurements,
but those reported for six-coordinate species are not suitable.Fortunately, we have isolated a new crystalline form of [Fe(OEP)(2-MeHIm)(NO)]+ with appropriate crystal symmetry characteristics to allow
single-crystal NRVS measurements. This new structure will be described.
With appropriate five- and six-coordinate species now available, we
have undertaken their oriented single-crystal NRVS that allows the
definitive assignment of both the stretching and the bend modes of
the axial FeNO group including the resolution of the near degenerate
bending modes in [Fe(OEP)(2-MeHIm)(NO)]+. Vibrational frequencies
can be used to illuminate coordination-site and ligand bonding subtleties
beyond that discernible by X-ray crystallography alone.[43]We comment on the stretching and bending
patterns of the five-
and six-coordinate {FeNO}6 species as compared to the five-
and six-coordinate {FeCO}6 and {FeNO}7 species.
We have also been able to study and assign the Fe–Im stretching
mode across the series of NO, CO, and O2iron complexes.
Experimental Section
General Information
All reactions and manipulations
for the preparation of the iron(III) porphyrin derivatives were carried
out under argon using a double manifold vacuum line, Schlenkware,
and cannula techniques. Dichloromethane, toluene, and hexanes were
distilled under argon over CaH2 and sodium/benzophenone,
respectively. Chlorobenzene was purified by washing with concentrated
sulfuric acid, then with water until the aqueous layer was neutral,
dried with sodium sulfate, and distilled twice over P2O5. 95% 57Fe2O3 was purchased
from Cambridge Isotopes. H2OEP was synthesized by literature
methods.[44] Nitric oxide (Mittler Specialty
Gases) was purified by fractional distillation through a trap containing
4A molecular sieves bathed in a dry ice/ethanol slurry.[45]
Small-Scale Metalation
Insertion
of 57Fe
into free-baseporphyrins was conducted in purified chlorobenzene
according to a modified Landergren method as follows.[46] Approximately 2 mL of 12 M HCl was used to dissolve ∼0.20
mmol 95% 57Fe enriched Fe2O3 contained
in a 250 mL Schlenk flask. After 5 min of stirring, HCl was removed
under vacuum to near dryness, and subsequent steps of the metalation
reaction were done in an inert environment using standard Schlenk
procedures. Failure to maintain an inert environment will likely result
in an incomplete or inefficient metal insertion. One hundred milliliters
of freshly distilled chlorobenzene was added via cannula, and the
mixture was refluxed for 2 h in a hot oil bath. One-half of the chlorobenzene
was removed by distillation, and 10 mL of a chlorobenzene solution
containing ∼0.15 mmol of H2OEP and 0.4 mL of 2,4,6-collidine
was added via cannula. After refluxing for 3 h, chlorobenzene was
removed under vacuum, and the residue was dissolved in 50 mL of CH2Cl2. The solution was washed twice with 50 mL of
DI water, thrice with 50 mL of 1 M HCl, and once with 50 mL of DI
water. After drying over Na2SO4 and filtration
through a sintered-glass filter, solvent was removed by rotoevaporation.
Minimal CH2Cl2 was used to redissolve the product
and transfer to an evaporation dish. The remaining solvent was evaporated
using very low heat.
Syntheses of [57Fe(OEP)(NO)]ClO4
Single crystals of this complex were prepared as
described earlier.[25,26] After metalation as described
above, the resulting [57Fe(OEP)(Cl)] was reacted with AgClO4 to produce [57Fe(OEP)OClO3].[47] To
10 mg (0.014 mmol) of [57Fe(OEP)OClO3] was added
∼2 mL CH2Cl2. NO gas was bubbled into
the solution for several minutes. A dramatic color change from brownish-red
to purple/pink occurred. A 1:1 mixture of hexanes and CH2Cl2 was used as the nonsolvent in the vapor diffusion
experiment under an NO atmosphere to obtain X-ray-quality crystals
that were used in the single-crystal NRVS experiments.Caution! Transition metal perchlorates should be handled with great
caution and be prepared in small quantities as metal perchlorates
are hazardous and may explode upon heating.
Syntheses of
[57Fe(OEP)(2-MeHIm)(NO)]ClO4
Procedures
similar to the reported method[48] were used
for the single-crystal preparation. Five-coordinate
[57Fe(OEP)(2-MeHIm)]ClO4 was prepared by the
reaction of [57Fe(OEP)OClO3] with 2-MeHIm in
methylene chloride.[49] Methylene chloride
(0.5 mL) was added to solid [57Fe(OEP)(2-MeHIm)]ClO4 (12 mg) in an 8 × 150 mm glass tube inside an extra
long Schlenk tube under argon. NO gas was bubbled into the solution
for 5–6 min. The color of the solution changed from red/brown
to purple/pink. X-ray-quality crystals were obtained by layering NO-saturated
hexanes over the solution in the tubes. An NO atmosphere must be maintained
inside the Schlenk tube during crystallization. These crystal were
used in both the X-ray structure determination and the single-crystal
NRVS experiments.
X-ray Structure Determination
A
black crystal with
the dimensions 0.52 × 0.43 × 0.17 mm3, glued
to the tip of a glass fiber, was used for the structure determination
at 100 K. Intensity data were collected on a Bruker Apex system with
graphite-monochromated Mo Kα radiation (λ = 0.71073 Å).
Absorption corrections were based on the multiscan technique as implemented
in SADABS.[50] The asymmetric unit contains
the full porphyrin cation, the perchlorate anion, and one-half of
a dichloromethane molecule. The structures were solved by direct methods
using SHELXS-97 and refined against F2 using SHELXL-97;[51,52] subsequent difference Fourier
syntheses led to the location of most of the remaining nonhydrogen
atoms. The perchlorate anion was found to be disordered over two distinct
orientations at the same crystallographic site with occupancies of
0.684 and 0.316. The solvent molecule is disordered around an inversion
center of the unit cell. For the structure refinement, all data were
used including negative intensities. All nonhydrogen atoms were refined
anisotropically. Hydrogen atoms were idealized with the standard SHELXL-97
idealization methods. Solid-state analysis of crystal packing distances
made use of the program MERCURY[53] from
the Cambridge Crystallographic Data Center. Complete crystallographic
details, atomic coordinates, anisotropic thermal parameters, and fixed
hydrogen atom coordinates are given in the Supporting
Information for the structure.
NRVS Crystal Mounting
Crystals were mounted onto specially
prepared dual arc goniometer heads. Copper wire, 4–5 cm in
length and 18 gauge, was affixed to the goniometer and bent into a
u-shape. A glass fiber, 5–8 mm in length, was then superglued
to project along the goniometer ϕ-axis. The connection of the
wire into the goniometer head was fortified with epoxy resin. A crystal
was then affixed to the tip of the glass fiber using super glue. The
wire was then carefully bent so that the crystal was approximately
on the ϕ-axis, and then stretched to the required height for
centering. Crystals were then oriented for NRVS analysis along specified
in-plane axes by methods described in the Supporting
Information.
NRVS Spectra
Spectra were measured
at Sector 3-ID of
the Advanced Photon Source, Argonne National Laboratory, Argonne,
IL. Single-crystal samples were previously mounted and aligned on
goniometer heads that were screwed into place on a rotating stage.
The mounted crystals were then located into the X-ray beam by translations
of the stage and rotated to the predetermined ϕ-angle required
for the particular direction of analysis desired. A stream of cold
N2 gas from a commercial cryocooler controlled crystal
temperature during NRVS measurements. Typical temperatures at the
crystal were 100–120 K. Vibrational spectra were measured using
an in-line high-resolution monochromator operating at 14.4125 keV
with 1.0 meV bandwidth scanning the energy of incident X-ray beam.[54] Spectra were recorded between −30 and
80 meV in steps of 0.25 meV, and all scans (3–6 replicates)
were normalized to the intensity of the incident beam and added. NRVS
raw data were converted to the vibrational density of states (VDOS)
using the program PHOENIX.[39,55] NRVS measurements were
made in two orthogonal directions for [57Fe(OEP)(NO)]ClO4 and three orthogonal directions for [57Fe(OEP)(2-MeHIm)(NO)]ClO4.
Vibrational Predictions and Predicted Mode Composition Factors e2
The Gaussian 09 program package[56] was used to optimize the structures and for
frequency analysis, with the (BP86)[57] and
(M06-L)[58] functionals. In general, we used
triple-ζ valence basis sets with polarization functions (TZVP)[59] on iron and 6-31G* for all other atoms. The S = 0 complexes [Fe(OEP)(NO)]+ and [Fe(OEP)(2-MeHIm)(NO)]+ were fully optimized without any constraints using the spin
unrestricted DFT method. The starting structure for each was obtained
from the crystal structure. Frequency calculations were performed
on the fully optimized structures at the same level to obtain the
vibrational frequencies of the 57Fe isotopomer. The frequencies
reported here were not scaled. The frequency data have been created
using the high precision format vibrational frequency eigenvectors
to calculate mode composition factors (e2) and vibrational density of states (VDOS) as described below.The G09 output files from the DFT calculations can be used to generate
predicted mode composition factors with our scripts.[60] The mode composition factors e2 for atom j and frequency mode α are
the fraction of total kinetic energy contributed by atom j (here, 57Fe, the NRVS active nucleus). The normal mode
calculations are obtained from the atomic displacement matrix together
with the equation:where the sum over i runs
over all atoms of the molecule, m is the atomic mass of atom i, and r is the absolute length of
the Cartesian displacement vector for atom i. The
polarized mode composition factors are defined in terms of two distinct
in-plane directions, which can be calculated from a projection of
the atomic displacement vectors x and y (eq 1).[61] The out-of-plane
atomic displacement perpendicular to the resulting porphyrin plane
for a normal mode is obtained from a projection of the atomic displacement
vector z (eq 2).The x, y, and z components
of the iron normal mode energy
for [Fe(OEP)(NO)]+ and [Fe(OEP)(2-MeHIm)(NO)]+ with eFe2 ≥ 0.01 are given in Tables S7, S8 of
the Supporting Information.The predicted
mode composition factors e2 can also be compared
to the integrated spectral areas obtained
from NRVS. Therefore, vibrational densities of states (VDOS) can be
simulated from the mode composition factors using the Gaussian normal
distributions function, where the full width at half height (fwhh)
is defined appropriately by considering the spectral resolution in
the experiment. In this study, the MATLAB R2010a software was used
to generate the predicted NRVS curves.
Results
The X-ray
structure of the [Fe(OEP)(2-MeHIm)(NO)]+ cation
has been determined; a thermal ellipsoid plot is shown in Figure 1. Also shown in the figure is one of the two orientations
of the perchlorate anion. Complete final crystallographic information
is given in Tables S1–S6 of the Supporting
Information.
Figure 1
Thermal ellipsoid diagram of the [Fe(OEP)(2-MeHIm)(NO)]+ cation along with the perchlorate counteranion. Ellipsoids
are drawn
at the 50% probability level. Hydrogen atoms are not shown for reasons
of clarity.
Thermal ellipsoid diagram of the [Fe(OEP)(2-MeHIm)(NO)]+ cation along with the perchlorate counteranion. Ellipsoids
are drawn
at the 50% probability level. Hydrogen atoms are not shown for reasons
of clarity.Figure 2 displays a formal diagram of the
displacement of each atom, in units of 0.01 Å, from the mean
plane of the 24-atom core for the [Fe(OEP)(2-MeHIm)(NO)]+ cation. The core conformation is moderately ruffled with the iron
atom effectively centered in the porphyrin plane. Figure 2 also gives average bond distances and bond angles
for the core atoms. Standard uncertainties, calculated on the assumption
that all values are drawn from the same population, are given in parentheses
following each averaged value.
Figure 2
Formal diagram
illustrating the deviation of individual atoms (in
units of 0.01 Å) from the 24-atom mean plane of the porphyrin
core. Positive values of the displacement are toward the NO ligand.
The orientation of the trans 2-methylimidazole ligand
with respect to the porphyrin molecular frame is illustrated by the
solid line. The “o” gives the position of the 2-methyl
substituent of the imidazole. Averaged values of the chemically unique
bond distances (in Å) and angles (in degrees) are shown. The
numbers in parentheses are the esd’s calculated on the assumption
that the averaged values were all drawn from the same population.
Oriented single-crystal NRVS
spectra were obtained for the five-coordinate
[Fe(OEP)(NO)]+ and six-coordinate [Fe(OEP)(2-MeHIm)(NO)]+ derivatives. Three distinct crystal orientations were measured
for [Fe(OEP)(2-MeHIm)(NO)]+: either perpendicular to the
porphyrin plane or parallel to the porphyrin plane and either perpendicular
or parallel to the axial imidazole plane. Figure 3 shows these experimental oriented crystal vibrational spectra.
In the high frequency region from ∼570–610 cm–1, one strong vibration is seen in each of the three measured directions.
Because the stretch and bend modes are expected to be the highest
frequencies for iron vibrations, the oriented crystal spectra show
the Fe–NO stretch as the out-of-plane mode, and the other two
in-plane modes, parallel and perpendicular to the imidazole plane,
must be the two near-degenerate Fe–N–O bending modes.
These vibrational measurements show that in powder (isotropic) measurements
the three peaks will typically either be poorly resolved or not resolved
at all. Thus, the unresolved powder peaks for the stretching and bending
modes seen by Praneeth et al.[37] and Moeser
et al.[38] are not unexpected.
Figure 3
NRVS data obtained on the three orthogonal directions
for [Fe(OEP)(2-MeHIm)(NO)]+.
Formal diagram
illustrating the deviation of individual atoms (in
units of 0.01 Å) from the 24-atom mean plane of the porphyrin
core. Positive values of the displacement are toward the NO ligand.
The orientation of the trans 2-methylimidazole ligand
with respect to the porphyrin molecular frame is illustrated by the
solid line. The “o” gives the position of the 2-methyl
substituent of the imidazole. Averaged values of the chemically unique
bond distances (in Å) and angles (in degrees) are shown. The
numbers in parentheses are the esd’s calculated on the assumption
that the averaged values were all drawn from the same population.NRVS data obtained on the three orthogonal directions
for [Fe(OEP)(2-MeHIm)(NO)]+.Two distinct orientations for five-coordinate [Fe(OEP)(NO)]+ were measured, one with the analyzing beam along the perpendicular
to the heme plane and a second with the beam in the porphyrin plane
(which is orthogonal to the first). The results are shown in the Discussion and provide all data required for the
assignment of the FeNO stretching and bending modes.Both sets
of measurements provide direct evidence for making in-plane
versus out-of-plane assignments; in particular, such measurements
are seen to be the most appropriate way to provide for the unambiguous
assignment of the FeNO stretching and bending modes.
Discussion
X-ray
Structure
All previously known crystalline forms
of [Fe(Porph)(R–Im)(NO)]+ derivatives are not appropriate
for a complete, detailed oriented single-crystal NRVS study. Such
a study requires a crystalline form in which the porphyrin planes
are all parallel and all molecules have the same orientation (molecules
related by inversion symmetry acceptable). Fortunately, we have been
able to obtain a new crystalline form of [Fe(OEP)(2-MeHIm)(NO)]ClO4 that meets these criteria and does allow measurements in
three distinct directions defined in the coordinate frame of the molecule.
This is illustrated in Supporting Information Figure S1. We briefly note the structural features of this new crystalline
form. Table 1 provides structural data for
related {FeNO}6 and FeIICO complexes, where
the trans ligand (when present) is an imidazole species. Comparison
of [Fe(OEP)(2-MeHIm)(NO)]ClO4 with these data shows the
expected close agreement: an effectively linear FeNO group with a
short Fe–N(NO) bond (1.641(2) Å), and a trans Fe–NIm bond distance of 2.028(2) Å. An interesting feature
is the Fe–NIm bond distances to the sterically hindered
2-MeHIm. As seen in Table 1, the Fe–NIm hindered bond distances range from 2.028 to 2.053 Å,
lengths comparable to the Fe–NIm distances to unhindered
imidazoles in CO complexes and much shorter than those to hindered
imidazoleCO species. Thus, both axial bonds in the six-coordinate
{FeNO}6 species are very strong: not only is there no structural
trans effect, but the Fe–NO bond is unaffected by the change
in coordination number. All species listed in Table 1 have coordination group distances appropriate for a low-spin
state for iron.[62]
Table 1
Selected
Structural Parameters of
{FeNO}6 Porphyrin Complexes and Related [Fe(Porph)(L)(CO)]
Complexesa
complex
Δ24b,c
(Fe–Np)avd
Fe–XXOc,e
X–Oc
Fe–NImc
∠Fe–X–Of
ϕImf,g
ref
Five-Coordinate
Complexes
[Fe(OEP)(NO)]+
0.29
1.994(1)
1.644(3)
1.112(4)
176.9(3)
(26)
[Fe(OEP)(NO)]+
0.32
1.994(5)
1.6528(13)
1.140(2)
173.19(13)
(25)
[Fe(OEP)(CO)]
0.20
1.988(2)
1.7140(11)
1.1463(12)
177.20(8)
(63)
Six-Coordinate Complexes
[Fe(OEP)(2-MeHIm)(NO)]+
–0.01
1.997(5)
1.641(2)
1.133(3)
2.028(2)
176.6(2)
26.3
this work
[Fe(OEP)(2-MeHIm)(NO)]+(pla)
–0.02
2.014(8)
1.649(2)
1.132(3)
2.053(2)
175.6(2)
17.4
(48)
[Fe(OEP)(2-MeHIm)(NO)]+(ruf)
0.03
2.003(7)
1.648(2)
1.139(2)
2.032(2)
177.4(2)
30.2
(48)
[Fe(OEP)(1-MeIm)(NO)]+
0.02
2.003(5)
1.6465(17)
1.135(2)
1.9889(16)
177.28(17)
31.3
(27)
[Fe(OETPP)(1-MeIm)(NO)]+
0.09
1.990(9)
1.650(2)
1.130(3)
1.983(2)
177.0(3)
14.6
(18)
[Fe(OEP)(1-MeIm)(CO)]
0.02
2.010(4)
1.7733(12)
1.1413(15)
2.0544(9)
175.67(11)
NAh
(64)
[Fe(TPP)(1-MeIm)(CO)]
0.02
2.005(6)
1.7600(17)
1.139(2)
2.0503(14)
177.03(15)
30.8
(65)
[Fe(TPP)(2-MeHIm)(CO)]
–0.01
1.9880(12)
1.7410(14)
1.1488(17)
2.1018(12)
175.96(13)
42.1
(65)
[Fe(TPP)(1,2-Me2Im)(CO)]
0.04
1.9853(10)
1.7537(15)
1.1408(19)
2.0779(11)
175.95(14)
43
(65)
[Fe(β-PocPivP)(1,2-Me21m)(CO)]
0.00
1.973(8)
1.768(7)
1.148(7)
2.079(5)
172.5(6)
NAh
(66)
Estimated standard deviations are
given in parentheses.
Displacement
of iron atom from the
24-atom mean plane, a positive value is toward the X–O (X =
N, C) ligand side.
Value
in angstroms.
Average value
in angstroms.
X = N or C.
Value in degrees.
Dihedral angle between imidazole
plane and the plane of closest Np–Fe–Nax.
Value not available.
Estimated standard deviations are
given in parentheses.Displacement
of iron atom from the
24-atom mean plane, a positive value is toward the X–O (X =
N, C) ligand side.Value
in angstroms.Average value
in angstroms.X = N or C.Value in degrees.Dihedral angle between imidazole
plane and the plane of closest Np–Fe–Nax.Value not available.
NRVS Data
The
oriented crystal spectra for both the
five- and the six-coordinate {FeNO}6 derivatives yield
clear assignments of the FeNO stretching (out-of-plane) and bending
modes (in-plane); compare Figures 3 and 4 (middle panel). These data show how the change
in coordination number leads to frequency shifts for these two modes
and allows comparison to other known heme systems with diatomic ligands.
For the {FeNO}6 derivative, [Fe(OEP)(NO)]+,
the experimental NRVS value for the Fe–NO stretch is 595 cm–1, and the experimental value for the Fe–N–O
bend is 402 cm–1. This pattern, where the stretch
is observed at higher frequency than the bend, follows that observed
for [Fe(OEP)(CO)][67] (573 and 505 cm–1) and the {FeNO}7 derivatives [Fe(OEP)(NO)][42] (517 and 394 cm–1) and [Fe(DPIX)(NO)][68] (528 and 399 cm–1). Frequencies
for the six-coordinate species are a bit more nuanced. The frequency
patterns for the six-coordinate analogs of CO’s[69] and {FeNO}7 NO’s[70−72] are reversed with the bend now found at higher frequency than the
stretch. Thus, the observed bend is 582 cm–1 and
the stretch is 499/513 cm–1 for [Fe(OEP)(1-MeIm)(CO)],[69] and the bend is 559 cm–1 and
the stretch is 433 cm–1 for [Fe(TpFPP)(1-MeIm)(NO)].[71] Again, in these cases, the value of the stretching
mode decreases whereas the value of the bending mode increases. However,
for [Fe(OEP)(2-MeHIm)(NO)]+, the observed Fe–NO
stretch remains high at 600 cm–1, whereas the two
near-degenerate bending modes increase to the observed values of 574
and 580 cm–1. Thus, with the very similar frequencies
for both the stretching and the bending modes, the pattern in six-coordinate
{FeNO}6 species is quite distinct from other six-coordinate
diatomics. The close similarity of the Fe–NO stretch in the
two coordination numbers undoubtedly reflects that the axial Fe–N(NO)
bond distances are unchanged.
Figure 4
Plots relating to the vibrational spectra of
[Fe(OEP)(NO)]+/0. The top panel displays the predicted
vibrational density
of states from an M06-L calculation for [Fe(OEP)(NO)]+.
The middle panel shows the experimental VDOS for the in-plane and
out-of-plane measurements for [Fe(OEP)(NO)]+. The bottom
panel gives the same experimental results for [Fe(OEP)(NO)]; figure
data were abstracted from refs (42) and (68).
Plots relating to the vibrational spectra of
[Fe(OEP)(NO)]+/0. The top panel displays the predicted
vibrational density
of states from an M06-L calculation for [Fe(OEP)(NO)]+.
The middle panel shows the experimental VDOS for the in-plane and
out-of-plane measurements for [Fe(OEP)(NO)]+. The bottom
panel gives the same experimental results for [Fe(OEP)(NO)]; figure
data were abstracted from refs (42) and (68).The bottom two panels of Figure 4 compare
the NRVS spectra of [Fe(OEP)(NO)]+ and [Fe(OEP)(NO)].[42] The Fe–NO stretch in the cation is found
to be 78 cm–1 higher, at 595 cm–1 as compared to 517 cm–1, consistent with the ∼0.1
Å decrease in the Fe–NO bond distances.[25,26,73−79] The purely in-plane bending mode of iron at 402 cm–1 in [Fe(OEP)(NO)]+ contrasts with the in-plane and out-of-plane
components of the bend in [Fe(OEP)(NO)] along with a small decrease
in the observed frequency.We have also carried out a series
of DFT calculations to aid in
understanding the complete vibrational spectra. For [Fe(OEP)(2-MeHIm)(NO)]+, three sets of DFT calculations based on the use of functionals
M06-L, BP86, and B3LYP were completed. All predictions gave resolved
bending and stretching modes with the stretching mode always at higher
frequency; the best match of the predicted spectra to the total observed
spectra was given by the M06-L calculations, and those will be used
here. Results of the other predictions are given in the Supporting Information. Consistent with the experimental
spectra, there are three main spectral regions to be considered. The
peaks in the ∼570–610 cm–1 region
are associated with the axial NO ligand. As has been commonly observed,
the vibrational prediction for the axial stretch is at higher frequency
than that observed.[60,80−82] In the lower
frequency regions, there are intense peaks in two distinct regions.
Those between ∼300–370 cm–1 are mostly
associated with in-plane iron motions, whereas those in the region
of ∼200–280 cm–1 are dominated by
out-of-plane iron motion. There is some in-plane/out-of-plane overlap
in the 240–280 cm–1 range. The complete predicted
spectrum is illustrated in Figure 5.
Figure 5
Complete
M06-L predicted spectrum of [Fe(OEP)(2-MeHIm)(NO)]+ further
showing (as e2 values,
bars) the directional components in the three orthogonal directions.
DFT calculations for [Fe(OEP)(NO)]+ were carried out
with the M06-L and BP86 functionals. Again, the M06-L functional gave
better matches to the observed spectra. (See top panel of Figure 4.) The predictions are in general accord with the
experimental data. The predicted bending mode frequencies are found
substantially below the stretch as observed in the single-crystal
data. These two bending modes (at 414.3 and 414.4 cm–1) are shown in Figure S8 (Supporting Information). This is in distinct contrast to the in-plane modes of [Fe(OEP)(2-MeHIm)(NO)]+ where the planar axial imidazole removes the x and y degeneracy.Thus, the two major orthogonal
bending modes predicted at 585 and
591 cm–1 are localized perpendicular or parallel
to the imidazole plane, respectively (Figure 5). These correspond to the observed peaks at 574 and 580 cm–1; the relative directionality and frequency orderings are preserved.
MOLEKEL depictions of the two modes are given in Figure 6. As can be seen, the motions of the imidazole are also in
the direction of the bend, thus ring rotation for the 591 cm–1 mode and motion perpendicular to the ring plane in the 585 cm–1 mode. Two minor in-plane peaks are also predicted
(Figure 5); these may explain the shoulders
seen at higher frequencies in both the in-plane x and the in-plane y spectra (Figure 3). It is to be noted however that the in-plane x shoulder is more intense than the DFT predictions would suggest.
Figure 6
DFT (M06-L) predicted Fe–NO bending modes
of [Fe(OEP)(2-MeHIm)(NO)]+ at 585 and 591 cm–1.
Complete
M06-L predicted spectrum of [Fe(OEP)(2-MeHIm)(NO)]+ further
showing (as e2 values,
bars) the directional components in the three orthogonal directions.DFT (M06-L) predicted Fe–NO bending modes
of [Fe(OEP)(2-MeHIm)(NO)]+ at 585 and 591 cm–1.For both species, there are a
number of in-plane vibrations below
∼370 cm–1. These modes are generally porphyrin
vibrations, especially ν49, ν50,
and ν53. Both the five- and the six-coordinate complexes
exhibit four relatively intense vibrations in the 338–360 cm–1 region. These frequencies are those expected for
the low-spin state. The two species do differ in the predicted motion
of iron. For [Fe(OEP)(2-MeHIm)(NO)]+, both near-degenerate
pairs of vibrations have the iron motion approximately parallel or
perpendicular to the axial imidazole plane. We also note that the
highest frequency vibration is observed and predicted to have more
intensity than the others. See Figure 7 for
MOLEKEL depictions of these modes. [Fe(OEP)(NO)]+, on the
other hand, has the two pairs of iron motions in this region, one
set along Fe–Np bonds and a second set halfway between
Fe–Np bonds. The observed maxima are found at 336
and 353 cm–1. These are illustrated in the MOLEKEL
depictions found in the Supporting Information (Figure S9). [Fe(OEP)(NO)]+ also has a second group of
in-plane vibrations centered around ∼295 cm–1. The predicted x and y components
are essentially equivalent, consistent with little or no anisotropy
in the porphyrin plane. The differences in the in-plane iron motion
in the two complexes probably reflect differences in the out-of-plane
displacements of iron that lead to differing amounts of mixing with
the ligand vibrations.
Figure 7
MOLEKEL depictions of the four highest frequency in-plane
modes
of [Fe(OEP)(2-MeHIm)(NO)]+.
MOLEKEL depictions of the four highest frequency in-plane
modes
of [Fe(OEP)(2-MeHIm)(NO)]+.At lower frequencies, the in-plane iron vibrations of [Fe(OEP)(2-MeHIm)(NO)]+ are distributed over a large range of modes mixed with ligand
vibrations and not well resolved in the experimental spectra. For
[Fe(OEP)(NO)]+, on the other hand, the in-plane modes are
less mixed and are predicted to occur over a smaller number of frequencies
that are resolved both experimentally (peaks at 285 and 304 cm–1) and theoretically. These are shown in Figure S10
of the Supporting Information.The
highest frequency peak in the z direction
spectra of [Fe(OEP)(2-MeHIm)(NO)]+ is observed at 600 cm–1, which is clearly higher than the bending mode frequencies
already described. The prediction of a peak 33 cm–1 higher than observed is not unexpected as the axial ligand frequencies
have always been the most difficult prediction for the DFT calculations.[80] The character of the M06-L prediction for [Fe(OEP)(2-MeHIm)(NO)]+ is shown in Figure 8. Thus, the Fe–NO
stretch is always observed and predicted at higher frequency than
the bend. We believe that the stretch/bend assignments made[37] for [Fe(TPP)(1-MeIm)(NO)]+ should
be emended to have the stretch at higher frequency than the bend.[83] Although we believe that the assignments by
Lehnert et al. should have the stretch at higher frequency than the
bends, their conclusions will be similar for either choice of assignment.
Incorrect assignments might, however, cause difficulties in creating
possible spectral correlations. The analogous Fe–NO stretch
in [Fe(OEP)(NO)]+ is seen at 595 cm–1, whereas the predicted position at 694 cm–1 shows
a much large deviation. We have noted that the axial stretch prediction
discrepancies are frequently larger in the five-coordinate systems.
Figure 8
DFT (M06-L)
predicted Fe–NO stretch mode (633 cm–1) and
Fe–Im stretch mode (225 cm–1) of [Fe(OEP)(2-MeHIm)(NO)]+.
DFT (M06-L)
predicted Fe–NO stretch mode (633 cm–1) and
Fe–Im stretch mode (225 cm–1) of [Fe(OEP)(2-MeHIm)(NO)]+.Other axial iron vibrations are
those of the doming and inverse
doming modes. For the five-coordinate species, the inverse doming
mode is predicted at 242 cm–1 and the doming mode
at 139 cm–1. Observed values are 242 and 151 cm–1, respectively. Values for the six-coordinate species
are 144 cm–1 for the doming mode, and the observed
value is 152 cm–1. Modes involving reverse doming
in the six-coordinate species are strongly mixed with other modes,
but the predicted character of the frequencies at 221 and 274 cm–1 does show this character.Probably the most
interesting axial vibration is that of iron to
the proximal imidazole. In five-coordinate iron(II) derivatives, the
Fe–Im stretch is readily observed by resonance Raman spectroscopy
and has been used extensively for protein and small-molecule characterization.
A range of frequencies for histidine-ligated proteins is observed
(∼200–256 cm–1)[84−93] that are correlated with the strength of the Fe–Im bond.
Factors that are known to influence the bond strength include whether
or not the histidine Nδ is hydrogen bonded.[94] The formation of an imidazolate leads to the
highest frequencies.[95] The relative ligand
orientation may also play a role.[96,97]Unfortunately,
for six-coordinate species, bands associated with
the Fe–Im stretch are typically not observed in resonance Raman
experiments, so that very little information has been available. Nuclear
resonance vibrational spectroscopy provides experimental information
on all iron vibrations and thus provides direct quantitative information.
However, the appearance of more than one predicted mode with simultaneous
iron and imidazole motion in this system as well as in previously
studied six-coordinate O2, CO, and {FeNO}7 hemes
leads to the difficult question of which frequency provides the most
accurate experimental description of the Fe–Im bond. We have
used the following procedure for this. We examine the predicted character
of each calculated frequency and choose the one that best resembles
the classical Fe–Im stretch. This “classical”
Fe–Im vibration for [Fe(OEP)(2-MeHIm)(NO)]+ is illustrated
in Figure 8 (225 cm–1). The
similarity of this mode to others previously published can be seen
in the simulations displayed in Figure 9 of ref (69) for [Fe(TPP)(1-MeIm)(CO)]
and Figure S9 of ref (100) for [Fe(TpivPP)(1-EtIm)(O2)]. We then match the predicted
and experimental frequencies to choose the best experimental value
for the stretch for all available compounds.The experimental
Fe–Im stretch frequencies are given in
Table 2 that also gives the experimental value
of the trans Fe–N(Im) bond distance. There are a total of seven
distinct species for which both the Fe–Im stretch and the Fe–N(Im)
bond distance have now been experimentally determined. Figure 9 plots the relationship between the two. The correlation
between the two is clearly evident and extends over a large range
of distances and frequencies. The strong correlation displayed may
strike some as self-evident, but we note that this is the first time
that such experimental data have been marshalled for a possible correlation.
The correlation clearly can be extended for the characterization of
systems in which only the vibrational data or the structural data
are available. Note that all of the Fe–Im stretching frequencies
listed in Table 2 are based on oriented single-crystal
NRVS measurements.
Table 2
Fe–Im Stretch Vibrations (NRVS
and Calculation) and X-ray Determined Fe–NIm Bond
Distances for [Fe(Porph)(RIm)(XO)] Complexes (X = N, C, or O)
complex
method
νFe–Ima
Fe–NImb
ref
Fe(III)
[Fe(OEP)(2-MeHIm)(NO)]+
SC NRVSc
238
230
222
2.028(2)
this work
DFT(M06-L)
225
222
201
this work
Fe(II)
[Fe(TPP)(1-MeIm)(CO)]
SC NRVSc
225
172
2.0503(14)
(65, 69)
DFT(B3LYP)
214
182
(69)
[Fe(TPP)(1-MeIm)(NO)]
SC NRVSc
149
175
2.173(2)
(70, 98)
QCC-NCA
151
176
(99)
tri-[Fe(TpFPP)(1-MeIm)(NO)]
SC NRVSc
140
167
2.1689(9)
(71)
mono-[Fe(TpFPP)(1-MeIm)(NO)]
SC NRVSc
153
177
2.1312(11)
(71)
DFT(B3LYP)
147
166
(71)
[Fe(TpivPP)(1-EtIm)(O2)]
SC NRVSc
196
174
134
2.043(3)
(100, 101)
DFT(B3LYP)
195
169
143
(100)
[Fe(TpivPP)(2-MeHIm)(O2)]
S-C NRVSc
187
175
130
2.091(5)
(100, 101)
[Fe(TpivPP)(1-MeIm)(O2)]
powder NRVS
205
175
136
(100)
The frequency (in
cm–1) with the motion that most closely resembles
that of the classical
Fe–Im stretch is given first.
Value in angstroms.
Obtained from single-crystal NRVS
experiment.
Figure 9
Correlation between Fe–NIm bond distances and
Fe–Im stretch frequencies (νFe–Im)
of six-coordinate [Fe(Porph)(RIm)(XO)] (X = N, C, O) complexes. ▲,
[Fe(OEP)(2-MeHIm)(NO)]+; ■, [Fe(TPP)(1-MeIm)(CO)];
○, [Fe(TpivPP)(2-MeHIm)(O2)] and [Fe(TpivPP)(1-MeIm)(O2)]; ●, [Fe(TPP)(1-MeIm)(NO)], tri-[Fe(TpFPP)(1-MeIm)(NO)], and mono-[Fe(TpFPP)(1-MeIm)(NO)].
Literature citations are given in Table 2.
The frequency (in
cm–1) with the motion that most closely resembles
that of the classical
Fe–Im stretch is given first.Value in angstroms.Obtained from single-crystal NRVS
experiment.Correlation between Fe–NIm bond distances and
Fe–Im stretch frequencies (νFe–Im)
of six-coordinate [Fe(Porph)(RIm)(XO)] (X = N, C, O) complexes. ▲,
[Fe(OEP)(2-MeHIm)(NO)]+; ■, [Fe(TPP)(1-MeIm)(CO)];
○, [Fe(TpivPP)(2-MeHIm)(O2)] and [Fe(TpivPP)(1-MeIm)(O2)]; ●, [Fe(TPP)(1-MeIm)(NO)], tri-[Fe(TpFPP)(1-MeIm)(NO)], and mono-[Fe(TpFPP)(1-MeIm)(NO)].
Literature citations are given in Table 2.In our view, the description of
the electronic state of the six-coordinate
{FeNO}6 species remains enigmatic. The isoelectronic character
of {FeNO}6 and {FeCO}6 species has often been
expressed, with the implied expectation of strong similarities; however,
our DFT calculations for [Fe(OEP)(2-MeHIm)(NO)]+ and [Fe(OEP)(2-MeHIm)(CO)]
show large differences in the relative energies of equivalent MO’s.
Similar results have been obtained previously.[102]The IR and NRVS vibrational data for [Fe(Porph)(R–Im)(NO)]+ species are consistent with calculations that predict a formal
oxidation state description as Fe(II)(NO+). The observed
Mössbauer spectra with the very small values for the isomer
shift are highly unusual for an iron(II) state; rather they are similar
to those observed for iron(IV). Yet calculations of Neese suggest
that this is a bonding effect that results from the extremely strong
π-bonding of an NO+ ligand.[103]The observed very strong Fe–N(NO) bond, yet the facile
loss
of NO in [Fe(Porph)(R–Im)(NO)]+ species, has puzzled
many investigators. Recent calculations of Lehnert and co-workers
have attempted to explain this perhaps paradoxical behavior. Praneeth
et al.’s calculations[37] predict
the ground-state structure of six-coordinate [Fe(Porph)(R–Im)(NO)]+ species as Fe(II)(NO+), with its very short axial
Fe–N(NO) bond distance. They further posit the existence of
high- and low-spin Fe(III)–NO(radical) states that are low-lying
states lying within a few kcal/mol of the ground state. The first
excited state could be within 1.0–1.3 kcal/mol of the ground
state.[37] They propose that it is these
states, with weaker Fe–N(NO) and N–O bond strengths,
that lead to the facile loss of NO.Although this suggestion
has some reasonable features, we expect
that the existence of such close-lying states would lead to substantial T-dependent Mössbauer quadrupole splitting values
as has been seen in the dioxygen complexes of hemoglobin and myoglobin.[32,104] If the separation of ground and excited states was 1.3 kcal/mol,
the excited state would be populated by ∼15%, sufficient to
have temperature effects on the quadrupole splitting value. Although
the experimentally available Mössbauer data are limited,[25] the expected temperature dependence of the quadrupole
splitting is not observed, thus casting some doubt on the suggestion
of close lying states. However, a significantly higher energy difference
has been given based on CASSCF or TD-DFT calculations.[105] Further experimental and theoretical work on
these challenging compounds is clearly warranted.
Summary
Oriented single-crystal NRVS studies for [Fe(OEP)(NO)]+ and [Fe(OEP)(2-MeHIm)(NO)]+ provide unequivocal assignments
for the Fe–N–O stretching and bending modes for both.
The differing pattern of stretch and bend as a function of coordination
number for the {FeNO}6 derivatives is noted and compared
to the patterns previously observed for the related CO and {FeNO}7 hemes. The use of NRVS methods allows the observation and
assignments of the several out-of-plane frequencies that are typically
not observed by other spectroscopic methods. In particular, the availability
of the previously unobserved Fe–Im stretching frequency and
structural data for seven distinct O2, NO, and CO species
establishes a correlation between the Fe–Im stretch and the
Fe–NIm bond distance.
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