Literature DB >> 23470205

Effects of imidazole deprotonation on vibrational spectra of high-spin iron(II) porphyrinates.

Chuanjiang Hu1, Qian Peng, Nathan J Silvernail, Alexander Barabanschikov, Jiyong Zhao, E Ercan Alp, Wolfgang Sturhahn, J Timothy Sage, W Robert Scheidt.   

Abstract

The effects of the deprotonation of coordinated imidazole on the vibrational dynamics of five-coordinate high-spin iron(II) porphyrinates have been investigated using nuclear resonance vibrational spectroscopy. Two complexes have been studied in detail with both powder and oriented single-crystal measurements. Changes in the vibrational spectra are clearly related to structural differences in the molecular structures that occur when imidazole is deprotonated. Most modes involving the simultaneous motion of iron and imidazolate are unresolved, but the one mode that is resolved is found at higher frequency in the imidazolates. These out-of-plane results are in accord with earlier resonance Raman studies of heme proteins. We also show the imidazole vs imidazolate differences in the in-plane vibrations that are not accessible to resonance Raman studies. The in-plane vibrations are at lower frequency in the imidazolate derivatives; the doming mode shifts are inconclusive. The stiffness, an experimentally determined force constant that averages the vibrational details to quantify the nearest-neighbor interactions, confirms that deprotonation inverts the relative strengths of axial and equatorial coordination.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 23470205      PMCID: PMC3613136          DOI: 10.1021/ic3026396

Source DB:  PubMed          Journal:  Inorg Chem        ISSN: 0020-1669            Impact factor:   5.165


  40 in total

1.  Coupling between oxidation state and hydrogen bond conformation in heme proteins.

Authors:  J S Valentine; R P Sheridan; L C Allen; P C Kahn
Journal:  Proc Natl Acad Sci U S A       Date:  1979-03       Impact factor: 11.205

2.  Electronic configuration of five-coordinate high-spin pyrazole-ligated iron(II) porphyrinates.

Authors:  Chuanjiang Hu; Bruce C Noll; Charles E Schulz; W Robert Scheidt
Journal:  Inorg Chem       Date:  2010-11-03       Impact factor: 5.165

Review 3.  Probing protein structure and dynamics with resonance Raman spectroscopy: cytochrome c peroxidase and hemoglobin.

Authors:  T G Spiro; G Smulevich; C Su
Journal:  Biochemistry       Date:  1990-05-15       Impact factor: 3.162

4.  Nuclear resonance vibrational spectra of five-coordinate imidazole-ligated iron(II) porphyrinates.

Authors:  Chuanjiang Hu; Alexander Barabanschikov; Mary K Ellison; Jiyong Zhao; E Ercan Alp; Wolfgang Sturhahn; Marek Z Zgierski; J Timothy Sage; W Robert Scheidt
Journal:  Inorg Chem       Date:  2012-01-13       Impact factor: 5.165

5.  Spectroscopic identification of reactive porphyrin motions.

Authors:  Alexander Barabanschikov; Alexander Demidov; Minoru Kubo; Paul M Champion; J Timothy Sage; Jiyong Zhao; Wolfgang Sturhahn; E Ercan Alp
Journal:  J Chem Phys       Date:  2011-07-07       Impact factor: 3.488

6.  Probing vibrational anisotropy with nuclear resonance vibrational spectroscopy.

Authors:  Jeffrey W Pavlik; Alexander Barabanschikov; Allen G Oliver; E Ercan Alp; Wolfgang Sturhahn; Jiyong Zhao; J Timothy Sage; W Robert Scheidt
Journal:  Angew Chem Int Ed Engl       Date:  2010-06-14       Impact factor: 15.336

7.  Principal active species of horseradish peroxidase, compound I: a hybrid quantum mechanical/molecular mechanical study.

Authors:  Etienne Derat; Shimrit Cohen; Sason Shaik; Ahmet Altun; Walter Thiel
Journal:  J Am Chem Soc       Date:  2005-10-05       Impact factor: 15.419

8.  Structure of the deoxymyoglobin model [Fe(TPP)(2-MeHIm)] reveals unusual porphyrin core distortions.

Authors:  Mary K Ellison; Charles E Schulz; W Robert Scheidt
Journal:  Inorg Chem       Date:  2002-04-22       Impact factor: 5.165

9.  Electronic configuration of high-spin imidazole-ligated iron(II) octaethylporphyrinates.

Authors:  Chuanjiang Hu; Jin An; Bruce C Noll; Charles E Schulz; W Robert Scheidt
Journal:  Inorg Chem       Date:  2006-05-15       Impact factor: 5.165

10.  Vibrational probes and determinants of the S = 0 ⇌ S = 2 spin crossover in five-coordinate [Fe(TPP)(CN)]-.

Authors:  Jianfeng Li; Qian Peng; Alexander Barabanschikov; Jeffrey W Pavlik; E Ercan Alp; Wolfgang Sturhahn; Jiyong Zhao; J Timothy Sage; W Robert Scheidt
Journal:  Inorg Chem       Date:  2012-10-19       Impact factor: 5.165

View more
  4 in total

1.  Probing heme vibrational anisotropy: an imidazole orientation effect?

Authors:  Qian Peng; Ming Li; Chuanjiang Hu; Jeffrey W Pavlik; Allen G Oliver; E Ercan Alp; Michael Y Hu; Jiyong Zhao; J Timothy Sage; W Robert Scheidt
Journal:  Inorg Chem       Date:  2013-09-10       Impact factor: 5.165

Review 2.  What Can Be Learned from Nuclear Resonance Vibrational Spectroscopy: Vibrational Dynamics and Hemes.

Authors:  W Robert Scheidt; Jianfeng Li; J Timothy Sage
Journal:  Chem Rev       Date:  2017-09-18       Impact factor: 60.622

3.  All high-spin (S = 2) iron(ii) hemes are NOT alike.

Authors:  Chuanjiang Hu; Charles E Schulz; W Robert Scheidt
Journal:  Dalton Trans       Date:  2015-09-21       Impact factor: 4.390

4.  Comprehensive Fe-ligand vibration identification in {FeNO}6 hemes.

Authors:  Jianfeng Li; Qian Peng; Allen G Oliver; E Ercan Alp; Michael Y Hu; Jiyong Zhao; J Timothy Sage; W Robert Scheidt
Journal:  J Am Chem Soc       Date:  2014-12-18       Impact factor: 15.419

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.