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Literature DB >> 24709395

Protein structure determination by MicroED.

Abstract

In this review we discuss the current advances relating to structure determination from protein microcrystals with special emphasis on the newly developed method called MicroED. This method uses a transmission electron cryo-microscope to collect electron diffraction data from extremely small 3-dimensional (3D) crystals. MicroED has been used to solve the 3D structure of the model protein lysozyme to 2.9Å resolution. As the method further matures, MicroED promises to offer a unique and widely applicable approach to protein crystallography using nanocrystals.

Entities: Chemical

Mesh：

Substances：
Proteins

Year: 2014 PMID： 24709395 PMCID： PMC5656570 DOI： 10.1016/j.sbi.2014.03.004

Source DB: PubMed Journal: Curr Opin Struct Biol ISSN： 0959-440X Impact factor: 6.809

35 in total

1. Image processing and lattice determination for three-dimensional nanocrystals.

Authors: Linhua Jiang; Dilyana Georgieva; Igor Nederlof; Zunfeng Liu; Jan Pieter Abrahams
Journal: Microsc Microanal Date: 2011-11-18 Impact factor: 4.127

2. Molecular structure determination by electron microscopy of unstained crystalline specimens.

Authors: P N Unwin; R Henderson
Journal: J Mol Biol Date: 1975-05-25 Impact factor: 5.469

3. X-ray structure of bacteriorhodopsin at 2.5 angstroms from microcrystals grown in lipidic cubic phases.

Authors: E Pebay-Peyroula; G Rummel; J P Rosenbusch; E M Landau
Journal: Science Date: 1997-09-12 Impact factor: 47.728

4. High-voltage electron diffraction from bacteriorhodopsin (purple membrane) is measurably dynamical.

Authors: R M Glaeser; T A Ceska
Journal: Acta Crystallogr A Date: 1989-09-01 Impact factor: 2.290

5. Lipid-protein interactions in double-layered two-dimensional AQP0 crystals.

Authors: Tamir Gonen; Yifan Cheng; Piotr Sliz; Yoko Hiroaki; Yoshinori Fujiyoshi; Stephen C Harrison; Thomas Walz
Journal: Nature Date: 2005-12-01 Impact factor: 49.962

6. Origin and temperature dependence of radiation damage in biological samples at cryogenic temperatures.

Authors: Alke Meents; Sascha Gutmann; Armin Wagner; Clemens Schulze-Briese
Journal: Proc Natl Acad Sci U S A Date: 2009-12-28 Impact factor: 11.205

7. Unit-cell determination from randomly oriented electron-diffraction patterns.

Authors: Linhua Jiang; Dilyana Georgieva; Henny W Zandbergen; Jan Pieter Abrahams
Journal: Acta Crystallogr D Biol Crystallogr Date: 2009-06-20

8. Overview of electron crystallography of membrane proteins: crystallization and screening strategies using negative stain electron microscopy.

Authors: Brent L Nannenga; Matthew G Iadanza; Breanna S Vollmar; Tamir Gonen
Journal: Curr Protoc Protein Sci Date: 2013

9. Overview of the CCP4 suite and current developments.

Authors: Martyn D Winn; Charles C Ballard; Kevin D Cowtan; Eleanor J Dodson; Paul Emsley; Phil R Evans; Ronan M Keegan; Eugene B Krissinel; Andrew G W Leslie; Airlie McCoy; Stuart J McNicholas; Garib N Murshudov; Navraj S Pannu; Elizabeth A Potterton; Harold R Powell; Randy J Read; Alexei Vagin; Keith S Wilson
Journal: Acta Crystallogr D Biol Crystallogr Date: 2011-03-18

10. A suite of software for processing MicroED data of extremely small protein crystals.

Authors: Matthew G Iadanza; Tamir Gonen
Journal: J Appl Crystallogr Date: 2014-05-29 Impact factor: 3.304

16 in total

Review 1. Understanding pre-mRNA splicing through crystallography.

Authors: Sara Espinosa; Lingdi Zhang; Xueni Li; Rui Zhao
Journal: Methods Date: 2017-05-12 Impact factor: 3.608

Review 2. How cryo-electron microscopy and X-ray crystallography complement each other.

Authors: Hong-Wei Wang; Jia-Wei Wang
Journal: Protein Sci Date: 2016-09-07 Impact factor: 6.725

3. Ab initio structure determination from prion nanocrystals at atomic resolution by MicroED.

Authors: Michael R Sawaya; Jose Rodriguez; Duilio Cascio; Michael J Collazo; Dan Shi; Francis E Reyes; Johan Hattne; Tamir Gonen; David S Eisenberg
Journal: Proc Natl Acad Sci U S A Date: 2016-09-19 Impact factor: 11.205

4. Transcription with a laser: Radiation-damage-free diffraction of RNA Polymerase II crystals.

Authors: Guowu Lin; Simon C Weiss; Sandra Vergara; Carlos Camacho; Guillermo Calero
Journal: Methods Date: 2019-04-25 Impact factor: 3.608

Review 5. The complementarity of serial femtosecond crystallography and MicroED for structure determination from microcrystals.

Authors: Nadia A Zatsepin; Chufeng Li; Paige Colasurd; Brent L Nannenga
Journal: Curr Opin Struct Biol Date: 2019-07-22 Impact factor: 6.809

Review 6. Taking the measure of MicroED.

Authors: Jose A Rodriguez; David S Eisenberg; Tamir Gonen
Journal: Curr Opin Struct Biol Date: 2017-06-22 Impact factor: 6.809

7. Structure of the toxic core of α-synuclein from invisible crystals.

Authors: Jose A Rodriguez; Magdalena I Ivanova; Michael R Sawaya; Duilio Cascio; Francis E Reyes; Dan Shi; Smriti Sangwan; Elizabeth L Guenther; Lisa M Johnson; Meng Zhang; Lin Jiang; Mark A Arbing; Brent L Nannenga; Johan Hattne; Julian Whitelegge; Aaron S Brewster; Marc Messerschmidt; Sébastien Boutet; Nicholas K Sauter; Tamir Gonen; David S Eisenberg
Journal: Nature Date: 2015-09-09 Impact factor: 49.962