Literature DB >> 27701014

MicroED opens a new era for biological structure determination.

Brent L Nannenga1, Tamir Gonen2.   

Abstract

In 2013 we unveiled the cryo-electron microscopy (CryoEM) method of MicroED, or three-dimensional (3D) electron diffraction of microscopic crystals. Here tiny 3D crystals of biological material are used in an electron microscope for diffraction data collection under cryogenic conditions. The data is indexed, integrated, merged and scaled using standard X-ray crystallography software to determine structures at atomic resolution. In this review we provide an overview of the MicroED method and compare it with other CryoEM methods.
Copyright © 2016 Elsevier Ltd. All rights reserved.

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Year:  2016        PMID: 27701014      PMCID: PMC5656569          DOI: 10.1016/j.sbi.2016.09.007

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  50 in total

Review 1.  Crystallographic analysis of protein conformational changes in the bacteriorhodopsin photocycle.

Authors:  S Subramaniam; R Henderson
Journal:  Biochim Biophys Acta       Date:  2000-08-30

2.  Three-dimensional structure of the bacterial protein-translocation complex SecYEG.

Authors:  Cécile Breyton; Winfried Haase; Tom A Rapoport; Werner Kühlbrandt; Ian Collinson
Journal:  Nature       Date:  2002-08-08       Impact factor: 49.962

3.  Preparation of 2D crystals of membrane proteins for high-resolution electron crystallography data collection.

Authors:  Priyanka D Abeyrathne; Mohamed Chami; Radosav S Pantelic; Kenneth N Goldie; Henning Stahlberg
Journal:  Methods Enzymol       Date:  2010       Impact factor: 1.600

4.  Molecular structure determination by electron microscopy of unstained crystalline specimens.

Authors:  P N Unwin; R Henderson
Journal:  J Mol Biol       Date:  1975-05-25       Impact factor: 5.469

5.  Electron crystallography of membrane proteins.

Authors:  Hui-Ting Chou; James E Evans; Henning Stahlberg
Journal:  Methods Mol Biol       Date:  2007

6.  Electron crystallography of ultrathin 3D protein crystals: atomic model with charges.

Authors:  Koji Yonekura; Kazuyuki Kato; Mitsuo Ogasawara; Masahiro Tomita; Chikashi Toyoshima
Journal:  Proc Natl Acad Sci U S A       Date:  2015-02-17       Impact factor: 11.205

7.  Atomic model of plant light-harvesting complex by electron crystallography.

Authors:  W Kühlbrandt; D N Wang; Y Fujiyoshi
Journal:  Nature       Date:  1994-02-17       Impact factor: 49.962

8.  iMOSFLM: a new graphical interface for diffraction-image processing with MOSFLM.

Authors:  T Geoff G Battye; Luke Kontogiannis; Owen Johnson; Harold R Powell; Andrew G W Leslie
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18

9.  Model for the structure of bacteriorhodopsin based on high-resolution electron cryo-microscopy.

Authors:  R Henderson; J M Baldwin; T A Ceska; F Zemlin; E Beckmann; K H Downing
Journal:  J Mol Biol       Date:  1990-06-20       Impact factor: 5.469

10.  The collection of high-resolution electron diffraction data.

Authors:  Tamir Gonen
Journal:  Methods Mol Biol       Date:  2013
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  16 in total

Review 1.  New approaches towards the understanding of integral membrane proteins: A structural perspective on G protein-coupled receptors.

Authors:  Reinhard Grisshammer
Journal:  Protein Sci       Date:  2017-06-07       Impact factor: 6.725

Review 2.  Understanding pre-mRNA splicing through crystallography.

Authors:  Sara Espinosa; Lingdi Zhang; Xueni Li; Rui Zhao
Journal:  Methods       Date:  2017-05-12       Impact factor: 3.608

3.  A statistical model for improved membrane protein expression using sequence-derived features.

Authors:  Shyam M Saladi; Nauman Javed; Axel Müller; William M Clemons
Journal:  J Biol Chem       Date:  2018-01-29       Impact factor: 5.157

Review 4.  The cryo-EM method microcrystal electron diffraction (MicroED).

Authors:  Brent L Nannenga; Tamir Gonen
Journal:  Nat Methods       Date:  2019-04-29       Impact factor: 28.547

Review 5.  The complementarity of serial femtosecond crystallography and MicroED for structure determination from microcrystals.

Authors:  Nadia A Zatsepin; Chufeng Li; Paige Colasurd; Brent L Nannenga
Journal:  Curr Opin Struct Biol       Date:  2019-07-22       Impact factor: 6.809

6.  Coxsackievirus B3 protease 3C: expression, purification, crystallization and preliminary structural insights.

Authors:  Stavroula Fili; Alexandros Valmas; Magdalini Christopoulou; Maria Spiliopoulou; Nikos Nikolopoulos; Julie Lichière; Souzana Logotheti; Fotini Karavassili; Eleftheria Rosmaraki; Andrew Fitch; Jonathan Wright; Detlef Beckers; Thomas Degen; Gwilherm Nénert; Rolf Hilgenfeld; Nicolas Papageorgiou; Bruno Canard; Bruno Coutard; Irene Margiolaki
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2016-11-25       Impact factor: 1.056

7.  Structure Determination from Lipidic Cubic Phase Embedded Microcrystals by MicroED.

Authors:  Lan Zhu; Guanhong Bu; Liang Jing; Dan Shi; Ming-Yue Lee; Tamir Gonen; Wei Liu; Brent L Nannenga
Journal:  Structure       Date:  2020-07-30       Impact factor: 5.006

8.  Detection of isolated protein-bound metal ions by single-particle cryo-STEM.

Authors:  Nadav Elad; Giuliano Bellapadrona; Lothar Houben; Irit Sagi; Michael Elbaum
Journal:  Proc Natl Acad Sci U S A       Date:  2017-10-02       Impact factor: 11.205

Review 9.  Ethnobotany and the Role of Plant Natural Products in Antibiotic Drug Discovery.

Authors:  Gina Porras; François Chassagne; James T Lyles; Lewis Marquez; Micah Dettweiler; Akram M Salam; Tharanga Samarakoon; Sarah Shabih; Darya Raschid Farrokhi; Cassandra L Quave
Journal:  Chem Rev       Date:  2020-11-09       Impact factor: 60.622

10.  MicroED: a versatile cryoEM method for structure determination.

Authors:  Brent L Nannenga; Tamir Gonen
Journal:  Emerg Top Life Sci       Date:  2018-02-06
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