Literature DB >> 30167465

MicroED: a versatile cryoEM method for structure determination.

Brent L Nannenga1, Tamir Gonen2,3,4.   

Abstract

Micro-electron diffraction, or MicroED, is a structure determination method that uses a cryo-transmission electron microscope to collect electron diffraction data from nanocrystals. This technique has been successfully used to determine the high-resolution structures of many targets from crystals orders of magnitude smaller than what is needed for X-ray diffraction experiments. In this review, we will describe the MicroED method and recent structures that have been determined. Additionally, applications of electron diffraction to the fields of small molecule crystallography and materials science will be discussed.

Entities:  

Year:  2018        PMID: 30167465      PMCID: PMC6112783          DOI: 10.1042/ETLS20170082

Source DB:  PubMed          Journal:  Emerg Top Life Sci        ISSN: 2397-8554


  49 in total

1.  Structure solution with automated electron diffraction tomography data: different instrumental approaches.

Authors:  T E Gorelik; A A Stewart; U Kolb
Journal:  J Microsc       Date:  2011-10-12       Impact factor: 1.758

2.  Ab Initio structure determination of vaterite by automated electron diffraction.

Authors:  Enrico Mugnaioli; Iryna Andrusenko; Timo Schüler; Niklas Loges; Robert E Dinnebier; Martin Panthöfer; Wolfgang Tremel; Ute Kolb
Journal:  Angew Chem Int Ed Engl       Date:  2012-06-08       Impact factor: 15.336

3.  Molecular structure determination by electron microscopy of unstained crystalline specimens.

Authors:  P N Unwin; R Henderson
Journal:  J Mol Biol       Date:  1975-05-25       Impact factor: 5.469

4.  Electron crystallography of ultrathin 3D protein crystals: atomic model with charges.

Authors:  Koji Yonekura; Kazuyuki Kato; Mitsuo Ogasawara; Masahiro Tomita; Chikashi Toyoshima
Journal:  Proc Natl Acad Sci U S A       Date:  2015-02-17       Impact factor: 11.205

5.  Transmission electron microscopy for the evaluation and optimization of crystal growth.

Authors:  Hilary P Stevenson; Guowu Lin; Christopher O Barnes; Ieva Sutkeviciute; Troy Krzysiak; Simon C Weiss; Shelley Reynolds; Ying Wu; Veeranagu Nagarajan; Alexander M Makhov; Robert Lawrence; Emily Lamm; Lisa Clark; Timothy J Gardella; Brenda G Hogue; Craig M Ogata; Jinwoo Ahn; Angela M Gronenborn; James F Conway; Jean Pierre Vilardaga; Aina E Cohen; Guillermo Calero
Journal:  Acta Crystallogr D Struct Biol       Date:  2016-04-26       Impact factor: 7.652

6.  iMOSFLM: a new graphical interface for diffraction-image processing with MOSFLM.

Authors:  T Geoff G Battye; Luke Kontogiannis; Owen Johnson; Harold R Powell; Andrew G W Leslie
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18

Review 7.  Assessment of microcrystal quality by transmission electron microscopy for efficient serial femtosecond crystallography.

Authors:  Christopher O Barnes; Elena G Kovaleva; Xiaofeng Fu; Hilary P Stevenson; Aaron S Brewster; Daniel P DePonte; Elizabeth L Baxter; Aina E Cohen; Guillermo Calero
Journal:  Arch Biochem Biophys       Date:  2016-03-02       Impact factor: 4.013

8.  Ab initio structure determination of nanocrystals of organic pharmaceutical compounds by electron diffraction at room temperature using a Timepix quantum area direct electron detector.

Authors:  E van Genderen; M T B Clabbers; P P Das; A Stewart; I Nederlof; K C Barentsen; Q Portillo; N S Pannu; S Nicolopoulos; T Gruene; J P Abrahams
Journal:  Acta Crystallogr A Found Adv       Date:  2016-02-05       Impact factor: 2.290

9.  Atomic structures of fibrillar segments of hIAPP suggest tightly mated β-sheets are important for cytotoxicity.

Authors:  Pascal Krotee; Jose A Rodriguez; Michael R Sawaya; Duilio Cascio; Francis E Reyes; Dan Shi; Johan Hattne; Brent L Nannenga; Marie E Oskarsson; Stephan Philipp; Sarah Griner; Lin Jiang; Charles G Glabe; Gunilla T Westermark; Tamir Gonen; David S Eisenberg
Journal:  Elife       Date:  2017-01-03       Impact factor: 8.140

10.  The collection of high-resolution electron diffraction data.

Authors:  Tamir Gonen
Journal:  Methods Mol Biol       Date:  2013
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  10 in total

1.  2D Electron Crystallography of Membrane Protein Single-, Double-, and Multi-Layered Ordered Arrays.

Authors:  Matthew C Johnson; Yusuf M Uddin; Kasahun Neselu; Ingeborg Schmidt-Krey
Journal:  Methods Mol Biol       Date:  2021

2.  Preparing samples from whole cells using focused-ion-beam milling for cryo-electron tomography.

Authors:  Felix R Wagner; Reika Watanabe; Ruud Schampers; Digvijay Singh; Hans Persoon; Miroslava Schaffer; Peter Fruhstorfer; Jürgen Plitzko; Elizabeth Villa
Journal:  Nat Protoc       Date:  2020-05-13       Impact factor: 13.491

3.  Next Generation Techniques for Determination of Protein-Protein Interactions: Beyond the Crystal Structure.

Authors:  Rachel Carter; Alessandra Luchini; Lance Liotta; Amanda Haymond
Journal:  Curr Pathobiol Rep       Date:  2019-07-01

4.  Structure Determination from Lipidic Cubic Phase Embedded Microcrystals by MicroED.

Authors:  Lan Zhu; Guanhong Bu; Liang Jing; Dan Shi; Ming-Yue Lee; Tamir Gonen; Wei Liu; Brent L Nannenga
Journal:  Structure       Date:  2020-07-30       Impact factor: 5.006

5.  Selecting a stable solid form of remdesivir using microcrystal electron diffraction and crystal structure prediction.

Authors:  Sivakumar Sekharan; Xuetao Liu; Zhuocen Yang; Xiang Liu; Li Deng; Shigang Ruan; Yuriy Abramov; GuangXu Sun; Sizhu Li; Tian Zhou; Baime Shi; Qun Zeng; Qiao Zeng; Chao Chang; Yingdi Jin; Xuekun Shi
Journal:  RSC Adv       Date:  2021-05-12       Impact factor: 4.036

6.  Editorial: Technical Advances in Cryo-Electron Microscopy.

Authors:  Angel Rivera-Calzada; Marta Carroni
Journal:  Front Mol Biosci       Date:  2019-08-22

Review 7.  Macromolecular Nanocrystal Structural Analysis with Electron and X-Rays: A Comparative Review.

Authors:  Krishna P Khakurel; Borislav Angelov; Jakob Andreasson
Journal:  Molecules       Date:  2019-09-26       Impact factor: 4.411

Review 8.  New Routes for Multicomponent Atomically Precise Metal Nanoclusters.

Authors:  Esma Khatun; Thalappil Pradeep
Journal:  ACS Omega       Date:  2020-12-18

9.  Theoretical 3D electron diffraction electrostatic potential maps of proteins modeled with a multipolar pseudoatom data bank.

Authors:  Marta Kulik; Michał Leszek Chodkiewicz; Paulina Maria Dominiak
Journal:  Acta Crystallogr D Struct Biol       Date:  2022-07-14       Impact factor: 5.699

10.  Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in Phenix.

Authors:  Dorothee Liebschner; Pavel V Afonine; Matthew L Baker; Gábor Bunkóczi; Vincent B Chen; Tristan I Croll; Bradley Hintze; Li Wei Hung; Swati Jain; Airlie J McCoy; Nigel W Moriarty; Robert D Oeffner; Billy K Poon; Michael G Prisant; Randy J Read; Jane S Richardson; David C Richardson; Massimo D Sammito; Oleg V Sobolev; Duncan H Stockwell; Thomas C Terwilliger; Alexandre G Urzhumtsev; Lizbeth L Videau; Christopher J Williams; Paul D Adams
Journal:  Acta Crystallogr D Struct Biol       Date:  2019-10-02       Impact factor: 7.652

  10 in total

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