Literature DB >> 24176641

Translation repressors, an RNA helicase, and developmental cues control RNP phase transitions during early development.

Arnaud Hubstenberger1, Scott L Noble2, Cristiana Cameron1, Thomas C Evans3.   

Abstract

Like membranous organelles, large-scale coassembly of macromolecules can organize functions in cells. Ribonucleoproteins (RNPs) can form liquid or solid aggregates, but control and consequences of these RNP states in living, developing tissue are poorly understood. Here, we show that regulated RNP factor interactions drive transitions among diffuse, semiliquid, or solid states to modulate RNP sorting and exchange in the Caenorhabditis elegans oocyte cytoplasm. Translation repressors induce an intrinsic capacity of RNP components to coassemble into either large semiliquids or solid lattices, whereas a conserved RNA helicase prevents polymerization into nondynamic solids. Developmental cues dramatically alter both fluidity and sorting within large RNP assemblies, inducing a transition from RNP segregation in quiescent oocytes to dynamic exchange in the early embryo. Therefore, large-scale organization of gene expression extends to the cytoplasm, where regulation of supramolecular states imparts specific patterns of RNP dynamics.
Copyright © 2013 Elsevier Inc. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 24176641      PMCID: PMC3869996          DOI: 10.1016/j.devcel.2013.09.024

Source DB:  PubMed          Journal:  Dev Cell        ISSN: 1534-5807            Impact factor:   12.270


  61 in total

1.  Stress granule assembly is mediated by prion-like aggregation of TIA-1.

Authors:  Natalie Gilks; Nancy Kedersha; Maranatha Ayodele; Lily Shen; Georg Stoecklin; Laura M Dember; Paul Anderson
Journal:  Mol Biol Cell       Date:  2004-09-15       Impact factor: 4.138

Review 2.  Getting RNA and protein in phase.

Authors:  Stephanie C Weber; Clifford P Brangwynne
Journal:  Cell       Date:  2012-06-08       Impact factor: 41.582

Review 3.  P-bodies and stress granules: possible roles in the control of translation and mRNA degradation.

Authors:  Carolyn J Decker; Roy Parker
Journal:  Cold Spring Harb Perspect Biol       Date:  2012-09-01       Impact factor: 10.005

Review 4.  P granule assembly and function in Caenorhabditis elegans germ cells.

Authors:  Dustin Updike; Susan Strome
Journal:  J Androl       Date:  2009-10-29

5.  Protein-only mechanism induces self-perpetuating changes in the activity of neuronal Aplysia cytoplasmic polyadenylation element binding protein (CPEB).

Authors:  Sven U Heinrich; Susan Lindquist
Journal:  Proc Natl Acad Sci U S A       Date:  2011-01-26       Impact factor: 11.205

Review 6.  RNA granules in germ cells.

Authors:  Ekaterina Voronina; Geraldine Seydoux; Paolo Sassone-Corsi; Ippei Nagamori
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-12-01       Impact factor: 10.005

7.  A protein component of Drosophila polar granules is encoded by vasa and has extensive sequence similarity to ATP-dependent helicases.

Authors:  B Hay; L Y Jan; Y N Jan
Journal:  Cell       Date:  1988-11-18       Impact factor: 41.582

Review 8.  Genome architecture: domain organization of interphase chromosomes.

Authors:  Wendy A Bickmore; Bas van Steensel
Journal:  Cell       Date:  2013-03-14       Impact factor: 41.582

9.  Assembly of RNP granules in stressed and aging oocytes requires nucleoporins and is coordinated with nuclear membrane blebbing.

Authors:  Joseph R Patterson; Megan P Wood; Jennifer A Schisa
Journal:  Dev Biol       Date:  2011-03-05       Impact factor: 3.582

10.  CAR-1, a protein that localizes with the mRNA decapping component DCAP-1, is required for cytokinesis and ER organization in Caenorhabditis elegans embryos.

Authors:  Jayne M Squirrell; Zachary T Eggers; Nancy Luedke; Bonnie Saari; Andrew Grimson; Gary E Lyons; Philip Anderson; John G White
Journal:  Mol Biol Cell       Date:  2005-11-02       Impact factor: 4.138

View more
  57 in total

1.  Casein kinase II promotes target silencing by miRISC through direct phosphorylation of the DEAD-box RNA helicase CGH-1.

Authors:  Amelia F Alessi; Vishal Khivansara; Ting Han; Mallory A Freeberg; James J Moresco; Patricia G Tu; Eric Montoye; John R Yates; Xantha Karp; John K Kim
Journal:  Proc Natl Acad Sci U S A       Date:  2015-12-15       Impact factor: 11.205

2.  The disordered P granule protein LAF-1 drives phase separation into droplets with tunable viscosity and dynamics.

Authors:  Shana Elbaum-Garfinkle; Younghoon Kim; Krzysztof Szczepaniak; Carlos Chih-Hsiung Chen; Christian R Eckmann; Sua Myong; Clifford P Brangwynne
Journal:  Proc Natl Acad Sci U S A       Date:  2015-05-26       Impact factor: 11.205

3.  Nuclear speckle fusion via long-range directional motion regulates speckle morphology after transcriptional inhibition.

Authors:  Jiah Kim; Kyu Young Han; Nimish Khanna; Taekjip Ha; Andrew S Belmont
Journal:  J Cell Sci       Date:  2019-04-17       Impact factor: 5.285

4.  Viscoelasticity of biomolecular condensates conforms to the Jeffreys model.

Authors:  Huan-Xiang Zhou
Journal:  J Chem Phys       Date:  2021-01-28       Impact factor: 3.488

5.  RNA Controls PolyQ Protein Phase Transitions.

Authors:  Huaiying Zhang; Shana Elbaum-Garfinkle; Erin M Langdon; Nicole Taylor; Patricia Occhipinti; Andrew A Bridges; Clifford P Brangwynne; Amy S Gladfelter
Journal:  Mol Cell       Date:  2015-10-15       Impact factor: 17.970

6.  The ERC1 scaffold protein implicated in cell motility drives the assembly of a liquid phase.

Authors:  Kristyna Sala; Agnese Corbetta; Claudia Minici; Diletta Tonoli; David H Murray; Eugenia Cammarota; Lucrezia Ribolla; Martina Ramella; Riccardo Fesce; Davide Mazza; Massimo Degano; Ivan de Curtis
Journal:  Sci Rep       Date:  2019-09-19       Impact factor: 4.379

7.  Analog sensitive chemical inhibition of the DEAD-box protein DDX3.

Authors:  Stephen N Floor; Krister J Barkovich; Kendall J Condon; Kevan M Shokat; Jennifer A Doudna
Journal:  Protein Sci       Date:  2015-12-26       Impact factor: 6.725

8.  Determinants for Fusion Speed of Biomolecular Droplets.

Authors:  Archishman Ghosh; Huan-Xiang Zhou
Journal:  Angew Chem Int Ed Engl       Date:  2020-09-08       Impact factor: 15.336

Review 9.  Phase Separation in Germ Cells and Development.

Authors:  Anne E Dodson; Scott Kennedy
Journal:  Dev Cell       Date:  2020-10-01       Impact factor: 12.270

10.  Autoinhibitory Interdomain Interactions and Subfamily-specific Extensions Redefine the Catalytic Core of the Human DEAD-box Protein DDX3.

Authors:  Stephen N Floor; Kendall J Condon; Deepak Sharma; Eckhard Jankowsky; Jennifer A Doudna
Journal:  J Biol Chem       Date:  2015-11-23       Impact factor: 5.157

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.