Literature DB >> 21270333

Protein-only mechanism induces self-perpetuating changes in the activity of neuronal Aplysia cytoplasmic polyadenylation element binding protein (CPEB).

Sven U Heinrich1, Susan Lindquist.   

Abstract

Neuronal cytoplasmic polyadenylation element binding protein (CPEB) plays a critical role in maintaining the functional and morphological long-lasting synaptic changes that underlie learning and memory. It can undergo a prion switch, but it remains unclear if this self-templating change in protein conformation is alone sufficient to create a stable change in CPEB activity: a robust "protein-only" biochemical memory. To investigate, we take advantage of yeast cells wherein the neuronal CPEB of Aplysia is expressed in the absence of any neuronal factors and can stably adopt either an active or an inactive state. Reminiscent of well-characterized yeast prions, we find that CPEB can adopt several distinct activity states or "strains." These states are acquired at a much higher spontaneous rate than is typical of yeast prions, but they are extremely stable--perpetuating for years--and have all of the non-Mendelian genetic characteristics of bona fide yeast prions. CPEB levels are too low to allow direct physical characterization, but CPEB strains convert a fusion protein, which shares only the prion-like domain of CPEB, into amyloid in a strain-specific manner. Lysates of CPEB strains seed the purified prion domain to adopt the amyloid conformation with strain-specific efficiencies. Amyloid conformers generated by spontaneous assembly of the purified prion domain (and a more biochemically tractable derivative) transformed cells with inactive CPEB into the full range of distinct CPEB strains. Thus, CPEB employs a prion mechanism to create stable, finely tuned self-perpetuating biochemical memories. These biochemical memories might be used in the local homeostatic maintenance of long-term learning-related changes in synaptic morphology and function.

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Year:  2011        PMID: 21270333      PMCID: PMC3041084          DOI: 10.1073/pnas.1019368108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  35 in total

1.  Creating a protein-based element of inheritance.

Authors:  L Li; S Lindquist
Journal:  Science       Date:  2000-01-28       Impact factor: 47.728

2.  Epigenetic regulation of translation reveals hidden genetic variation to produce complex traits.

Authors:  Heather L True; Ilana Berlin; Susan L Lindquist
Journal:  Nature       Date:  2004-08-15       Impact factor: 49.962

3.  Conformational variations in an infectious protein determine prion strain differences.

Authors:  Motomasa Tanaka; Peter Chien; Nariman Naber; Roger Cooke; Jonathan S Weissman
Journal:  Nature       Date:  2004-03-18       Impact factor: 49.962

Review 4.  The persistence of long-term memory: a molecular approach to self-sustaining changes in learning-induced synaptic growth.

Authors:  Craig H Bailey; Eric R Kandel; Kausik Si
Journal:  Neuron       Date:  2004-09-30       Impact factor: 17.173

Review 5.  Protein factors in pre-mRNA 3'-end processing.

Authors:  C R Mandel; Y Bai; L Tong
Journal:  Cell Mol Life Sci       Date:  2008-04       Impact factor: 9.261

6.  Yeast [PSI+] prion aggregates are formed by small Sup35 polymers fragmented by Hsp104.

Authors:  Dmitry S Kryndushkin; Ilya M Alexandrov; Michael D Ter-Avanesyan; Vitaly V Kushnirov
Journal:  J Biol Chem       Date:  2003-09-24       Impact factor: 5.157

7.  Protein-only transmission of three yeast prion strains.

Authors:  Chih-Yen King; Ruben Diaz-Avalos
Journal:  Nature       Date:  2004-03-18       Impact factor: 49.962

8.  Novel proteinaceous infectious particles cause scrapie.

Authors:  S B Prusiner
Journal:  Science       Date:  1982-04-09       Impact factor: 47.728

9.  A neuronal isoform of the aplysia CPEB has prion-like properties.

Authors:  Kausik Si; Susan Lindquist; Eric R Kandel
Journal:  Cell       Date:  2003-12-26       Impact factor: 41.582

10.  A neuronal isoform of CPEB regulates local protein synthesis and stabilizes synapse-specific long-term facilitation in aplysia.

Authors:  Kausik Si; Maurizio Giustetto; Amit Etkin; Ruby Hsu; Agnieszka M Janisiewicz; Maria Conchetta Miniaci; Joung-Hun Kim; Huixiang Zhu; Eric R Kandel
Journal:  Cell       Date:  2003-12-26       Impact factor: 41.582

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  35 in total

1.  Translation repressors, an RNA helicase, and developmental cues control RNP phase transitions during early development.

Authors:  Arnaud Hubstenberger; Scott L Noble; Cristiana Cameron; Thomas C Evans
Journal:  Dev Cell       Date:  2013-10-28       Impact factor: 12.270

Review 2.  Prions in yeast.

Authors:  Susan W Liebman; Yury O Chernoff
Journal:  Genetics       Date:  2012-08       Impact factor: 4.562

3.  Orientation of aromatic residues in amyloid cores: structural insights into prion fiber diversity.

Authors:  Anna Reymer; Kendra K Frederick; Sandra Rocha; Tamás Beke-Somfai; Catherine C Kitts; Susan Lindquist; Bengt Nordén
Journal:  Proc Natl Acad Sci U S A       Date:  2014-11-17       Impact factor: 11.205

4.  Amyloid-like assembly of the low complexity domain of yeast Nab3.

Authors:  Thomas W O'Rourke; Travis J Loya; PamelaSara E Head; John R Horton; Daniel Reines
Journal:  Prion       Date:  2015-01-22       Impact factor: 3.931

Review 5.  Generic nature of the condensed states of proteins.

Authors:  Monika Fuxreiter; Michele Vendruscolo
Journal:  Nat Cell Biol       Date:  2021-06-09       Impact factor: 28.824

6.  A Putative Biochemical Engram of Long-Term Memory.

Authors:  Liying Li; Consuelo Perez Sanchez; Brian D Slaughter; Yubai Zhao; Mohammed Repon Khan; Jay R Unruh; Boris Rubinstein; Kausik Si
Journal:  Curr Biol       Date:  2016-11-03       Impact factor: 10.834

Review 7.  Long-term memory consolidation: The role of RNA-binding proteins with prion-like domains.

Authors:  Indulekha P Sudhakaran; Mani Ramaswami
Journal:  RNA Biol       Date:  2016-10-11       Impact factor: 4.652

Review 8.  The tip of the iceberg: RNA-binding proteins with prion-like domains in neurodegenerative disease.

Authors:  Oliver D King; Aaron D Gitler; James Shorter
Journal:  Brain Res       Date:  2012-01-21       Impact factor: 3.252

Review 9.  Biomolecular Assemblies: Moving from Observation to Predictive Design.

Authors:  Corey J Wilson; Andreas S Bommarius; Julie A Champion; Yury O Chernoff; David G Lynn; Anant K Paravastu; Chen Liang; Ming-Chien Hsieh; Jennifer M Heemstra
Journal:  Chem Rev       Date:  2018-10-03       Impact factor: 60.622

Review 10.  Physiological and environmental control of yeast prions.

Authors:  Tatiana A Chernova; Keith D Wilkinson; Yury O Chernoff
Journal:  FEMS Microbiol Rev       Date:  2013-12-04       Impact factor: 16.408

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