Literature DB >> 26669440

Casein kinase II promotes target silencing by miRISC through direct phosphorylation of the DEAD-box RNA helicase CGH-1.

Amelia F Alessi1, Vishal Khivansara2, Ting Han2, Mallory A Freeberg3, James J Moresco4, Patricia G Tu4, Eric Montoye5, John R Yates4, Xantha Karp5, John K Kim6.   

Abstract

MicroRNAs (miRNAs) play essential, conserved roles in diverse developmental processes through association with the miRNA-induced silencing complex (miRISC). Whereas fundamental insights into the mechanistic framework of miRNA biogenesis and target gene silencing have been established, posttranslational modifications that affect miRISC function are less well understood. Here we report that the conserved serine/threonine kinase, casein kinase II (CK2), promotes miRISC function in Caenorhabditis elegans. CK2 inactivation results in developmental defects that phenocopy loss of miRISC cofactors and enhances the loss of miRNA function in diverse cellular contexts. Whereas CK2 is dispensable for miRNA biogenesis and the stability of miRISC cofactors, it is required for efficient miRISC target mRNA binding and silencing. Importantly, we identify the conserved DEAD-box RNA helicase, CGH-1/DDX6, as a key CK2 substrate within miRISC and demonstrate phosphorylation of a conserved N-terminal serine is required for CGH-1 function in the miRNA pathway.

Entities:  

Keywords:  CGH-1; casein kinase II; miRISC; microRNA; phosphorylation

Mesh:

Substances:

Year:  2015        PMID: 26669440      PMCID: PMC4702986          DOI: 10.1073/pnas.1509499112

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  89 in total

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Authors:  R C Cassada; R L Russell
Journal:  Dev Biol       Date:  1975-10       Impact factor: 3.582

Review 2.  Maintenance of C. elegans.

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Journal:  WormBook       Date:  2006-02-11

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Authors:  E Hu; C S Rubin
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4.  Genes and mechanisms related to RNA interference regulate expression of the small temporal RNAs that control C. elegans developmental timing.

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Journal:  Cell       Date:  2001-07-13       Impact factor: 41.582

5.  RAS is regulated by the let-7 microRNA family.

Authors:  Steven M Johnson; Helge Grosshans; Jaclyn Shingara; Mike Byrom; Rich Jarvis; Angie Cheng; Emmanuel Labourier; Kristy L Reinert; David Brown; Frank J Slack
Journal:  Cell       Date:  2005-03-11       Impact factor: 41.582

6.  Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.

Authors:  Alfredo Castello; Bernd Fischer; Katrin Eichelbaum; Rastislav Horos; Benedikt M Beckmann; Claudia Strein; Norman E Davey; David T Humphreys; Thomas Preiss; Lars M Steinmetz; Jeroen Krijgsveld; Matthias W Hentze
Journal:  Cell       Date:  2012-05-31       Impact factor: 41.582

7.  The let-7 target gene mouse lin-41 is a stem cell specific E3 ubiquitin ligase for the miRNA pathway protein Ago2.

Authors:  Agnieszka Rybak; Heiko Fuchs; Kamyar Hadian; Lena Smirnova; Ellery A Wulczyn; Geert Michel; Robert Nitsch; Daniel Krappmann; F Gregory Wulczyn
Journal:  Nat Cell Biol       Date:  2009-11-08       Impact factor: 28.824

8.  Carbodiimide-mediated cross-linking of RNA to nylon membranes improves the detection of siRNA, miRNA and piRNA by northern blot.

Authors:  Gurman Singh Pall; Carles Codony-Servat; Jane Byrne; Leigh Ritchie; Andrew Hamilton
Journal:  Nucleic Acids Res       Date:  2007-04-02       Impact factor: 16.971

9.  Distinct argonaute-mediated 22G-RNA pathways direct genome surveillance in the C. elegans germline.

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Journal:  Mol Cell       Date:  2009-10-01       Impact factor: 17.970

10.  Regulation of RNA granule dynamics by phosphorylation of serine-rich, intrinsically disordered proteins in C. elegans.

Authors:  Jennifer T Wang; Jarrett Smith; Bi-Chang Chen; Helen Schmidt; Dominique Rasoloson; Alexandre Paix; Bramwell G Lambrus; Deepika Calidas; Eric Betzig; Geraldine Seydoux
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  6 in total

1.  Recent Molecular Genetic Explorations of Caenorhabditis elegans MicroRNAs.

Authors:  Victor Ambros; Gary Ruvkun
Journal:  Genetics       Date:  2018-07       Impact factor: 4.562

2.  Casein kinase II is required for proper cell division and acts as a negative regulator of centrosome duplication in Caenorhabditis elegans embryos.

Authors:  Jeffrey C Medley; Megan M Kabara; Michael D Stubenvoll; Lauren E DeMeyer; Mi Hye Song
Journal:  Biol Open       Date:  2017-01-15       Impact factor: 2.422

3.  DDX54 regulates transcriptome dynamics during DNA damage response.

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Journal:  Genome Res       Date:  2017-06-08       Impact factor: 9.043

4.  Insight into the interaction between the RNA helicase CGH-1 and EDC-3 and its implications.

Authors:  Yong Zhang; Ke Wang; Kanglong Yang; Yunyu Shi; Jingjun Hong
Journal:  Sci Rep       Date:  2021-10-13       Impact factor: 4.379

Review 5.  DEAD-Box RNA Helicases in Cell Cycle Control and Clinical Therapy.

Authors:  Lu Zhang; Xiaogang Li
Journal:  Cells       Date:  2021-06-18       Impact factor: 6.600

6.  HRPK-1, a conserved KH-domain protein, modulates microRNA activity during Caenorhabditis elegans development.

Authors:  Li Li; Isana Veksler-Lublinsky; Anna Zinovyeva
Journal:  PLoS Genet       Date:  2019-10-04       Impact factor: 5.917

  6 in total

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