Literature DB >> 19875490

P granule assembly and function in Caenorhabditis elegans germ cells.

Dustin Updike1, Susan Strome.   

Abstract

Germ granules are large, non-membrane-bound, ribonucleoprotein (RNP) organelles found in the germ line cytoplasm of most, if not all, animals. The term germ granule is synonymous with the perinuclear nuage in mouse and human germ cells. These large RNPs are complexed with germ line-specific cytoplasmic structures such as the mitochondrial cloud, intermitochondrial cement, and chromatoid bodies. The widespread presence of germ granules across species and the associated germ line defects when germ granules are compromised suggest that germ granules are key determinants of the identity and special properties of germ cells. The nematode Caenorhabditis elegans has been a very fruitful model system for the study of germ granules, wherein they are referred to as P granules. P granules contain a heterogeneous mixture of RNAs and proteins. To date, most of the known germ granule proteins across species, and all of the known P granule components in C elegans, are associated with RNA metabolism, which suggests that a main function of germ granules is posttranscriptional regulation. Here we review P granule structure and localization, P granule composition, the genetic pathway of P granule assembly, and the consequences in the germ line when P granule components are lost. The findings in C elegans have important implications for the germ granule function during postnatal germ cell differentiation in mammals.

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Year:  2009        PMID: 19875490      PMCID: PMC2905540          DOI: 10.2164/jandrol.109.008292

Source DB:  PubMed          Journal:  J Androl        ISSN: 0196-3635


  68 in total

1.  Caenorhabditis elegans decapping proteins: localization and functional analysis of Dcp1, Dcp2, and DcpS during embryogenesis.

Authors:  Sabbi Lall; Fabio Piano; Richard E Davis
Journal:  Mol Biol Cell       Date:  2005-10-05       Impact factor: 4.138

Review 2.  Asymmetric cell division and axis formation in the embryo.

Authors:  Pierre Gönczy; Lesilee S Rose
Journal:  WormBook       Date:  2005-10-15

Review 3.  Specification of the germ line.

Authors:  Susan Strome
Journal:  WormBook       Date:  2005-07-28

Review 4.  Germline chromatin.

Authors:  Christine E Schaner; William G Kelly
Journal:  WormBook       Date:  2006-01-24

Review 5.  Germ cell specification in mice.

Authors:  Katsuhiko Hayashi; Susana M Chuva de Sousa Lopes; M Azim Surani
Journal:  Science       Date:  2007-04-20       Impact factor: 47.728

6.  CAR-1, a protein that localizes with the mRNA decapping component DCAP-1, is required for cytokinesis and ER organization in Caenorhabditis elegans embryos.

Authors:  Jayne M Squirrell; Zachary T Eggers; Nancy Luedke; Bonnie Saari; Andrew Grimson; Gary E Lyons; Philip Anderson; John G White
Journal:  Mol Biol Cell       Date:  2005-11-02       Impact factor: 4.138

7.  A conserved RNA-protein complex component involved in physiological germline apoptosis regulation in C. elegans.

Authors:  Peter R Boag; Akira Nakamura; T Keith Blackwell
Journal:  Development       Date:  2005-10-12       Impact factor: 6.868

Review 8.  Germ versus soma decisions: lessons from flies and worms.

Authors:  Susan Strome; Ruth Lehmann
Journal:  Science       Date:  2007-04-20       Impact factor: 47.728

9.  The DEAD box RNA helicase VBH-1 is required for germ cell function in C. elegans.

Authors:  L Silvia Salinas; Ernesto Maldonado; Marina Macías-Silva; T Keith Blackwell; Rosa E Navarro
Journal:  Genesis       Date:  2007-09       Impact factor: 2.487

10.  A complex containing the Sm protein CAR-1 and the RNA helicase CGH-1 is required for embryonic cytokinesis in Caenorhabditis elegans.

Authors:  Anjon Audhya; Francie Hyndman; Ian X McLeod; Amy S Maddox; John R Yates; Arshad Desai; Karen Oegema
Journal:  J Cell Biol       Date:  2005-10-24       Impact factor: 10.539

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  90 in total

1.  Organizing the oocyte: RNA localization meets phase separation.

Authors:  Sarah E Cabral; Kimberly L Mowry
Journal:  Curr Top Dev Biol       Date:  2020-03-09       Impact factor: 4.897

Review 2.  New insights into the regulation of RNP granule assembly in oocytes.

Authors:  Jennifer A Schisa
Journal:  Int Rev Cell Mol Biol       Date:  2012       Impact factor: 6.813

Review 3.  Germ Line Versus Soma in the Transition from Egg to Embryo.

Authors:  S Zachary Swartz; Gary M Wessel
Journal:  Curr Top Dev Biol       Date:  2015-08-19       Impact factor: 4.897

4.  The DEAD box helicase RDE-12 promotes amplification of RNAi in cytoplasmic foci in C. elegans.

Authors:  Huan Yang; Jim Vallandingham; Philip Shiu; Hua Li; Craig P Hunter; Ho Yi Mak
Journal:  Curr Biol       Date:  2014-03-27       Impact factor: 10.834

5.  Tug of War between Condensate Phases in a Minimal Macromolecular System.

Authors:  Archishman Ghosh; Xiaojia Zhang; Huan-Xiang Zhou
Journal:  J Am Chem Soc       Date:  2020-05-04       Impact factor: 15.419

6.  In Vivo Interaction Proteomics in Caenorhabditis elegans Embryos Provides New Insights into P Granule Dynamics.

Authors:  Jia-Xuan Chen; Patricia G Cipriani; Desirea Mecenas; Jolanta Polanowska; Fabio Piano; Kristin C Gunsalus; Matthias Selbach
Journal:  Mol Cell Proteomics       Date:  2016-02-24       Impact factor: 5.911

7.  Translation repressors, an RNA helicase, and developmental cues control RNP phase transitions during early development.

Authors:  Arnaud Hubstenberger; Scott L Noble; Cristiana Cameron; Thomas C Evans
Journal:  Dev Cell       Date:  2013-10-28       Impact factor: 12.270

Review 8.  A multitasking Argonaute: exploring the many facets of C. elegans CSR-1.

Authors:  Christopher J Wedeles; Monica Z Wu; Julie M Claycomb
Journal:  Chromosome Res       Date:  2013-12       Impact factor: 5.239

Review 9.  C. elegans as a model for membrane traffic.

Authors:  Ken Sato; Anne Norris; Miyuki Sato; Barth D Grant
Journal:  WormBook       Date:  2014-04-25

10.  Complex formation of RNA silencing proteins in the perinuclear region of Neurospora crassa.

Authors:  Logan M Decker; Erin C Boone; Hua Xiao; Benjamin S Shanker; Shannon F Boone; Shanika L Kingston; Seung A Lee; Thomas M Hammond; Patrick K T Shiu
Journal:  Genetics       Date:  2015-02-02       Impact factor: 4.562

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