Literature DB >> 26474065

RNA Controls PolyQ Protein Phase Transitions.

Huaiying Zhang1, Shana Elbaum-Garfinkle2, Erin M Langdon3, Nicole Taylor2, Patricia Occhipinti3, Andrew A Bridges3, Clifford P Brangwynne4, Amy S Gladfelter5.   

Abstract

Compartmentalization in cells is central to the spatial and temporal control of biochemistry. In addition to membrane-bound organelles, membrane-less compartments form partitions in cells. Increasing evidence suggests that these compartments assemble through liquid-liquid phase separation. However, the spatiotemporal control of their assembly, and how they maintain distinct functional and physical identities, is poorly understood. We have previously shown an RNA-binding protein with a polyQ-expansion called Whi3 is essential for the spatial patterning of cyclin and formin transcripts in cytosol. Here, we show that specific mRNAs that are known physiological targets of Whi3 drive phase separation. mRNA can alter the viscosity of droplets, their propensity to fuse, and the exchange rates of components with bulk solution. Different mRNAs impart distinct biophysical properties of droplets, indicating mRNA can bring individuality to assemblies. Our findings suggest that mRNAs can encode not only genetic information but also the biophysical properties of phase-separated compartments.
Copyright © 2015 Elsevier Inc. All rights reserved.

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Year:  2015        PMID: 26474065      PMCID: PMC5221516          DOI: 10.1016/j.molcel.2015.09.017

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  38 in total

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3.  Intrinsically disordered proteins as crucial constituents of cellular aqueous two phase systems and coacervates.

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Journal:  FEBS Lett       Date:  2014-11-29       Impact factor: 4.124

4.  Inverse size scaling of the nucleolus by a concentration-dependent phase transition.

Authors:  Stephanie C Weber; Clifford P Brangwynne
Journal:  Curr Biol       Date:  2015-02-19       Impact factor: 10.834

5.  The Ashbya gossypii genome as a tool for mapping the ancient Saccharomyces cerevisiae genome.

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Journal:  Science       Date:  2004-03-04       Impact factor: 47.728

Review 6.  Polyglutamine neurodegeneration: protein misfolding revisited.

Authors:  Aislinn J Williams; Henry L Paulson
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7.  Isolation and characterization of WHI3, a size-control gene of Saccharomyces cerevisiae.

Authors:  R S Nash; T Volpe; B Futcher
Journal:  Genetics       Date:  2001-04       Impact factor: 4.402

8.  Phase transitions in the assembly of multivalent signalling proteins.

Authors:  Pilong Li; Sudeep Banjade; Hui-Chun Cheng; Soyeon Kim; Baoyu Chen; Liang Guo; Marc Llaguno; Javoris V Hollingsworth; David S King; Salman F Banani; Paul S Russo; Qiu-Xing Jiang; B Tracy Nixon; Michael K Rosen
Journal:  Nature       Date:  2012-03-07       Impact factor: 49.962

9.  A nuclear F-actin scaffold stabilizes ribonucleoprotein droplets against gravity in large cells.

Authors:  Marina Feric; Clifford P Brangwynne
Journal:  Nat Cell Biol       Date:  2013-09-01       Impact factor: 28.824

10.  Causal signals between codon bias, mRNA structure, and the efficiency of translation and elongation.

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  264 in total

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3.  Amyotrophic lateral sclerosis-linked mutations increase the viscosity of liquid-like TDP-43 RNP granules in neurons.

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5.  Spatiotemporal Control of Intracellular Phase Transitions Using Light-Activated optoDroplets.

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6.  mRNA structure determines specificity of a polyQ-driven phase separation.

Authors:  Erin M Langdon; Yupeng Qiu; Amirhossein Ghanbari Niaki; Grace A McLaughlin; Chase A Weidmann; Therese M Gerbich; Jean A Smith; John M Crutchley; Christina M Termini; Kevin M Weeks; Sua Myong; Amy S Gladfelter
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Review 7.  Amyloid-Like β-Aggregates as Force-Sensitive Switches in Fungal Biofilms and Infections.

Authors:  Peter N Lipke; Stephen A Klotz; Yves F Dufrene; Desmond N Jackson; Melissa C Garcia-Sherman
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8.  Engineered Ribonucleoprotein Granules Inhibit Translation in Protocells.

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Review 9.  More than Just a Phase: Prions at the Crossroads of Epigenetic Inheritance and Evolutionary Change.

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Review 10.  The Role of RNA in Biological Phase Separations.

Authors:  Marta M Fay; Paul J Anderson
Journal:  J Mol Biol       Date:  2018-05-10       Impact factor: 5.469

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