Literature DB >> 23498936

Genome architecture: domain organization of interphase chromosomes.

Wendy A Bickmore1, Bas van Steensel.   

Abstract

The architecture of interphase chromosomes is important for the regulation of gene expression and genome maintenance. Chromosomes are linearly segmented into hundreds of domains with different protein compositions. Furthermore, the spatial organization of chromosomes is nonrandom and is characterized by many local and long-range contacts among genes and other sequence elements. A variety of genome-wide mapping techniques have made it possible to chart these properties at high resolution. Combined with microscopy and computational modeling, the results begin to yield a more coherent picture that integrates linear and three-dimensional (3D) views of chromosome organization in relation to gene regulation and other nuclear functions.
Copyright © 2013 Elsevier Inc. All rights reserved.

Mesh:

Year:  2013        PMID: 23498936     DOI: 10.1016/j.cell.2013.02.001

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  338 in total

1.  Robust Hi-C Maps of Enhancer-Promoter Interactions Reveal the Function of Non-coding Genome in Neural Development and Diseases.

Authors:  Leina Lu; Xiaoxiao Liu; Wei-Kai Huang; Paola Giusti-Rodríguez; Jian Cui; Shanshan Zhang; Wanying Xu; Zhexing Wen; Shufeng Ma; Jonathan D Rosen; Zheng Xu; Cynthia F Bartels; Riki Kawaguchi; Ming Hu; Peter C Scacheri; Zhili Rong; Yun Li; Patrick F Sullivan; Hongjun Song; Guo-Li Ming; Yan Li; Fulai Jin
Journal:  Mol Cell       Date:  2020-06-26       Impact factor: 17.970

2.  Nanoscale spatial organization of the HoxD gene cluster in distinct transcriptional states.

Authors:  Pierre J Fabre; Alexander Benke; Elisabeth Joye; Thi Hanh Nguyen Huynh; Suliana Manley; Denis Duboule
Journal:  Proc Natl Acad Sci U S A       Date:  2015-10-26       Impact factor: 11.205

3.  Xist imprinting is promoted by the hemizygous (unpaired) state in the male germ line.

Authors:  Sha Sun; Bernhard Payer; Satoshi Namekawa; Jee Young An; William Press; Jovani Catalan-Dibene; Hongjae Sunwoo; Jeannie T Lee
Journal:  Proc Natl Acad Sci U S A       Date:  2015-10-21       Impact factor: 11.205

Review 4.  Coming to terms with chromatin structure.

Authors:  Liron Even-Faitelson; Vahideh Hassan-Zadeh; Zahra Baghestani; David P Bazett-Jones
Journal:  Chromosoma       Date:  2015-07-30       Impact factor: 4.316

5.  Invariant TAD Boundaries Constrain Cell-Type-Specific Looping Interactions between Promoters and Distal Elements around the CFTR Locus.

Authors:  Emily M Smith; Bryan R Lajoie; Gaurav Jain; Job Dekker
Journal:  Am J Hum Genet       Date:  2016-01-07       Impact factor: 11.025

6.  Dynamic Behavior of the RNA Polymerase II and the Ubiquitin Proteasome System During the Neuronal DNA Damage Response to Ionizing Radiation.

Authors:  Iñigo Casafont; Ana Palanca; Vanesa Lafarga; Jorge Mata-Garrido; Maria T Berciano; Miguel Lafarga
Journal:  Mol Neurobiol       Date:  2015-12-11       Impact factor: 5.590

7.  Distinct Cellular Assembly Stoichiometry of Polycomb Complexes on Chromatin Revealed by Single-molecule Chromatin Immunoprecipitation Imaging.

Authors:  Roubina Tatavosian; Chao Yu Zhen; Huy Nguyen Duc; Maggie M Balas; Aaron M Johnson; Xiaojun Ren
Journal:  J Biol Chem       Date:  2015-09-17       Impact factor: 5.157

Review 8.  Large-scale chromatin organization: the good, the surprising, and the still perplexing.

Authors:  Andrew S Belmont
Journal:  Curr Opin Cell Biol       Date:  2013-11-13       Impact factor: 8.382

9.  Chromatin Hyperacetylation Impacts Chromosome Folding by Forming a Nuclear Subcompartment.

Authors:  Celeste D Rosencrance; Haneen N Ammouri; Qi Yu; Tiffany Ge; Emily J Rendleman; Stacy A Marshall; Kyle P Eagen
Journal:  Mol Cell       Date:  2020-04-02       Impact factor: 17.970

Review 10.  The role of lamin A/C in mesenchymal stem cell differentiation.

Authors:  Bo Zhang; Yang Yang; Reziwan Keyimu; Jin Hao; Zhihe Zhao; Rui Ye
Journal:  J Physiol Biochem       Date:  2019-01-31       Impact factor: 4.158

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