Literature DB >> 23876529

Photoswitchable fluorescent proteins: ten years of colorful chemistry and exciting applications.

Xin X Zhou1, Michael Z Lin.   

Abstract

Reversibly photoswitchable fluorescent proteins (RSFPs) are fluorescent proteins whose fluorescence, upon excitation at a certain wavelength, can be switched on or off by light in a reversible manner. In the last 10 years, many new RSFPs have been developed and novel applications in cell imaging discovered that rely on their photoswitching properties. This review will describe research on the mechanisms of reversible photoswitching and recent applications using RSFPs. While cis-trans isomerization of the chromophore is believed to be the general mechanism for most RSFPs, structural studies reveal diversity in the details of photoswitching mechanisms, including different effects of protonation, chromophore planarity, and pocket flexibility. Applications of RSFPs include new types of live-cell superresolution imaging, tracking of protein movements and interactions, information storage, and optical control of protein activity.
Copyright © 2013 The Authors. Published by Elsevier Ltd.. All rights reserved.

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Year:  2013        PMID: 23876529      PMCID: PMC3771498          DOI: 10.1016/j.cbpa.2013.05.031

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  45 in total

Review 1.  Reversible photoswitching in fluorescent proteins: a mechanistic view.

Authors:  Dominique Bourgeois; Virgile Adam
Journal:  IUBMB Life       Date:  2012-04-25       Impact factor: 3.885

2.  Widely accessible method for superresolution fluorescence imaging of living systems.

Authors:  Peter Dedecker; Gary C H Mo; Thomas Dertinger; Jin Zhang
Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-18       Impact factor: 11.205

3.  Molecular basis of the light-driven switching of the photochromic fluorescent protein Padron.

Authors:  Tanja Brakemann; Gert Weber; Martin Andresen; Gerrit Groenhof; Andre C Stiel; Simon Trowitzsch; Christian Eggeling; Helmut Grubmüller; Stefan W Hell; Markus C Wahl; Stefan Jakobs
Journal:  J Biol Chem       Date:  2010-03-16       Impact factor: 5.157

4.  1.8 A bright-state structure of the reversibly switchable fluorescent protein Dronpa guides the generation of fast switching variants.

Authors:  Andre C Stiel; Simon Trowitzsch; Gert Weber; Martin Andresen; Christian Eggeling; Stefan W Hell; Stefan Jakobs; Markus C Wahl
Journal:  Biochem J       Date:  2007-02-15       Impact factor: 3.857

5.  Highlighted generation of fluorescence signals using simultaneous two-color irradiation on Dronpa mutants.

Authors:  Ryoko Ando; Cristina Flors; Hideaki Mizuno; Johan Hofkens; Atsushi Miyawaki
Journal:  Biophys J       Date:  2007-03-23       Impact factor: 4.033

6.  Structural basis for reversible photobleaching of a green fluorescent protein homologue.

Authors:  J Nathan Henderson; Hui-Wang Ai; Robert E Campbell; S James Remington
Journal:  Proc Natl Acad Sci U S A       Date:  2007-04-09       Impact factor: 11.205

7.  Generation of monomeric reversibly switchable red fluorescent proteins for far-field fluorescence nanoscopy.

Authors:  Andre C Stiel; Martin Andresen; Hannes Bock; Michael Hilbert; Jessica Schilde; Andreas Schönle; Christian Eggeling; Alexander Egner; Stefan W Hell; Stefan Jakobs
Journal:  Biophys J       Date:  2008-07-25       Impact factor: 4.033

8.  Structural characterization of IrisFP, an optical highlighter undergoing multiple photo-induced transformations.

Authors:  Virgile Adam; Mickaël Lelimousin; Susan Boehme; Guillaume Desfonds; Karin Nienhaus; Martin J Field; Joerg Wiedenmann; Sean McSweeney; G Ulrich Nienhaus; Dominique Bourgeois
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-18       Impact factor: 11.205

9.  Reverse pH-dependence of chromophore protonation explains the large Stokes shift of the red fluorescent protein mKeima.

Authors:  Sebastien Violot; Philippe Carpentier; Laurent Blanchoin; Dominique Bourgeois
Journal:  J Am Chem Soc       Date:  2009-08-05       Impact factor: 15.419

10.  A unique series of reversibly switchable fluorescent proteins with beneficial properties for various applications.

Authors:  Hao Chang; Mingshu Zhang; Wei Ji; Juanjuan Chen; Yongdeng Zhang; Bei Liu; Jingze Lu; Junlong Zhang; Pingyong Xu; Tao Xu
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-28       Impact factor: 11.205

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  38 in total

1.  Mechanism and bottlenecks in strand photodissociation of split green fluorescent proteins (GFPs).

Authors:  Chi-Yun Lin; Johan Both; Keunbong Do; Steven G Boxer
Journal:  Proc Natl Acad Sci U S A       Date:  2017-02-27       Impact factor: 11.205

2.  Structural Evidence of Photoisomerization Pathways in Fluorescent Proteins.

Authors:  Jeffrey Chang; Matthew G Romei; Steven G Boxer
Journal:  J Am Chem Soc       Date:  2019-09-24       Impact factor: 15.419

3.  Out-of-Phase Imaging after Optical Modulation (OPIOM) for Multiplexed Fluorescence Imaging Under Adverse Optical Conditions.

Authors:  Raja Chouket; Ruikang Zhang; Agnès Pellissier-Tanon; Annie Lemarchand; Agathe Espagne; Thomas Le Saux; Ludovic Jullien
Journal:  Methods Mol Biol       Date:  2021

4.  A Near-Infrared Photoswitchable Protein-Fluorophore Tag for No-Wash Live Cell Imaging.

Authors:  Wei Sheng; Setare Tahmasebi Nick; Elizabeth M Santos; Xinliang Ding; Jun Zhang; Chrysoula Vasileiou; James H Geiger; Babak Borhan
Journal:  Angew Chem Int Ed Engl       Date:  2018-11-12       Impact factor: 15.336

Review 5.  Single-molecule localization to study cytoskeletal structures, membrane complexes, and mechanosensors.

Authors:  R Magrassi; S Scalisi; F Cella Zanacchi
Journal:  Biophys Rev       Date:  2019-09-16

6.  Unified Model for Photophysical and Electro-Optical Properties of Green Fluorescent Proteins.

Authors:  Chi-Yun Lin; Matthew G Romei; Luke M Oltrogge; Irimpan I Mathews; Steven G Boxer
Journal:  J Am Chem Soc       Date:  2019-09-11       Impact factor: 15.419

7.  Genetically Encoded Spy Peptide Fusion System to Detect Plasma Membrane-Localized Proteins In Vivo.

Authors:  Claire N Bedbrook; Mihoko Kato; Sripriya Ravindra Kumar; Anupama Lakshmanan; Ravi D Nath; Fei Sun; Paul W Sternberg; Frances H Arnold; Viviana Gradinaru
Journal:  Chem Biol       Date:  2015-07-23

Review 8.  Fluorescence Imaging Methods to Investigate Translation in Single Cells.

Authors:  Jeetayu Biswas; Yang Liu; Robert H Singer; Bin Wu
Journal:  Cold Spring Harb Perspect Biol       Date:  2019-04-01       Impact factor: 10.005

9.  Infrared spectroscopy reveals multi-step multi-timescale photoactivation in the photoconvertible protein archetype dronpa.

Authors:  Sergey P Laptenok; Agnieszka A Gil; Christopher R Hall; Andras Lukacs; James N Iuliano; Garth A Jones; Gregory M Greetham; Paul Donaldson; Atsushi Miyawaki; Peter J Tonge; Stephen R Meech
Journal:  Nat Chem       Date:  2018-06-11       Impact factor: 24.427

Review 10.  Switchable Fluorophores for Single-Molecule Localization Microscopy.

Authors:  Honglin Li; Joshua C Vaughan
Journal:  Chem Rev       Date:  2018-09-17       Impact factor: 60.622

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