Literature DB >> 31529362

Single-molecule localization to study cytoskeletal structures, membrane complexes, and mechanosensors.

R Magrassi1,2, S Scalisi3,4, F Cella Zanacchi5,6.   

Abstract

In the last decades, a promising breakthrough in fluorescence imaging was represented by the advent of super-resolution microscopy (SRM). Super-resolution techniques recently became a popular method to study sub-cellular structures, providing a successful approach to observe cytoskeletal and focal adhesion proteins. Among the SR techniques, single-molecule localization microscopy plays a significant role due to its ability to unveil structures and molecular organizations in biological systems. Furthermore, since they provide information at the molecular level, these techniques are increasingly being used to study the stoichiometry and interaction between several membrane channel proteins and their accessory subunits. The aim of this review is to describe the single-molecule localization-based techniques and their applications relevant to cytoskeletal structures and membrane complexes in order to provide as future prospective an overall picture of their correlation with the mechanosensor channel expression and activity.

Keywords:  Cytoskeletal structures; Mechanosensors; Membrane complexes; Single molecule localization miscroscopy; Super-resolution microscopy

Year:  2019        PMID: 31529362      PMCID: PMC6815297          DOI: 10.1007/s12551-019-00595-2

Source DB:  PubMed          Journal:  Biophys Rev        ISSN: 1867-2450


  107 in total

1.  Multicolor protein labeling in living cells using mutant β-lactamase-tag technology.

Authors:  Shuji Watanabe; Shin Mizukami; Yuichiro Hori; Kazuya Kikuchi
Journal:  Bioconjug Chem       Date:  2010-10-20       Impact factor: 4.774

2.  SR-Tesseler: a method to segment and quantify localization-based super-resolution microscopy data.

Authors:  Florian Levet; Eric Hosy; Adel Kechkar; Corey Butler; Anne Beghin; Daniel Choquet; Jean-Baptiste Sibarita
Journal:  Nat Methods       Date:  2015-09-07       Impact factor: 28.547

3.  Single-molecule evaluation of fluorescent protein photoactivation efficiency using an in vivo nanotemplate.

Authors:  Nela Durisic; Lara Laparra-Cuervo; Angel Sandoval-Álvarez; Joseph Steven Borbely; Melike Lakadamyali
Journal:  Nat Methods       Date:  2014-01-05       Impact factor: 28.547

4.  Dynamic Organization of Chromatin Domains Revealed by Super-Resolution Live-Cell Imaging.

Authors:  Tadasu Nozaki; Ryosuke Imai; Mai Tanbo; Ryosuke Nagashima; Sachiko Tamura; Tomomi Tani; Yasumasa Joti; Masaru Tomita; Kayo Hibino; Masato T Kanemaki; Kerstin S Wendt; Yasushi Okada; Takeharu Nagai; Kazuhiro Maeshima
Journal:  Mol Cell       Date:  2017-07-14       Impact factor: 17.970

5.  Turning single-molecule localization microscopy into a quantitative bioanalytical tool.

Authors:  Philip R Nicovich; Dylan M Owen; Katharina Gaus
Journal:  Nat Protoc       Date:  2017-02-02       Impact factor: 13.491

Review 6.  Precisely and accurately localizing single emitters in fluorescence microscopy.

Authors:  Hendrik Deschout; Francesca Cella Zanacchi; Michael Mlodzianoski; Alberto Diaspro; Joerg Bewersdorf; Samuel T Hess; Kevin Braeckmans
Journal:  Nat Methods       Date:  2014-03       Impact factor: 28.547

7.  A simple method to estimate the average localization precision of a single-molecule localization microscopy experiment.

Authors:  Ulrike Endesfelder; Sebastian Malkusch; Franziska Fricke; Mike Heilemann
Journal:  Histochem Cell Biol       Date:  2014-02-13       Impact factor: 4.304

8.  A class of membrane proteins shaping the tubular endoplasmic reticulum.

Authors:  Gia K Voeltz; William A Prinz; Yoko Shibata; Julia M Rist; Tom A Rapoport
Journal:  Cell       Date:  2006-02-10       Impact factor: 41.582

Review 9.  Visualizing and discovering cellular structures with super-resolution microscopy.

Authors:  Yaron M Sigal; Ruobo Zhou; Xiaowei Zhuang
Journal:  Science       Date:  2018-08-30       Impact factor: 47.728

10.  A near-infrared fluorophore for live-cell super-resolution microscopy of cellular proteins.

Authors:  Gražvydas Lukinavičius; Keitaro Umezawa; Nicolas Olivier; Alf Honigmann; Guoying Yang; Tilman Plass; Veronika Mueller; Luc Reymond; Ivan R Corrêa; Zhen-Ge Luo; Carsten Schultz; Edward A Lemke; Paul Heppenstall; Christian Eggeling; Suliana Manley; Kai Johnsson
Journal:  Nat Chem       Date:  2013-01-06       Impact factor: 24.427

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  1 in total

1.  Science by the sea: how nanoengineering met mechanobiology in Camogli.

Authors:  Aldo Ferrari; Marco Capitanio; Massimo Vassalli; Boris Martinac
Journal:  Biophys Rev       Date:  2019-09-16
  1 in total

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