Literature DB >> 22375034

A unique series of reversibly switchable fluorescent proteins with beneficial properties for various applications.

Hao Chang1, Mingshu Zhang, Wei Ji, Juanjuan Chen, Yongdeng Zhang, Bei Liu, Jingze Lu, Junlong Zhang, Pingyong Xu, Tao Xu.   

Abstract

Reversibly switchable fluorescent proteins (RSFPs) have attracted widespread interest for emerging techniques including repeated tracking of protein behavior and superresolution microscopy. Among the limited number of RSFPs available, only Dronpa is widely employed for most cell biology applications due to its monomeric and other favorable photochemical properties. Here we developed a series of monomeric green RSFPs with beneficial optical characteristics such as high photon output per switch, high photostability, a broad range of switching rate, and pH-dependence, which make them potentially useful for various applications. One member of this series, mGeos-M, exhibits the highest photon budget and localization precision potential among all green RSFPs. We propose mGeos-M as a candidate to replace Dronpa for applications such as dynamic tracking, dual-color superresolution imaging, and optical lock-in detection.

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Year:  2012        PMID: 22375034      PMCID: PMC3311367          DOI: 10.1073/pnas.1113770109

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  35 in total

1.  Heterogeneous distribution of isoactins in cultured vascular smooth muscle cells does not reflect segregation of contractile and cytoskeletal domains.

Authors:  J Song; N F Worth; B E Rolfe; G R Campbell; J H Campbell
Journal:  J Histochem Cytochem       Date:  2000-11       Impact factor: 2.479

2.  Precise nanometer localization analysis for individual fluorescent probes.

Authors:  Russell E Thompson; Daniel R Larson; Watt W Webb
Journal:  Biophys J       Date:  2002-05       Impact factor: 4.033

3.  Data storage based on photochromic and photoconvertible fluorescent proteins.

Authors:  Virgile Adam; Hideaki Mizuno; Alexei Grichine; Jun-ichi Hotta; Yutaka Yamagata; Benjamien Moeyaert; G Ulrich Nienhaus; Atsushi Miyawaki; Dominique Bourgeois; Johan Hofkens
Journal:  J Biotechnol       Date:  2010-04-21       Impact factor: 3.307

4.  Regulated fast nucleocytoplasmic shuttling observed by reversible protein highlighting.

Authors:  Ryoko Ando; Hideaki Mizuno; Atsushi Miyawaki
Journal:  Science       Date:  2004-11-19       Impact factor: 47.728

5.  EosFP, a fluorescent marker protein with UV-inducible green-to-red fluorescence conversion.

Authors:  Jörg Wiedenmann; Sergey Ivanchenko; Franz Oswald; Florian Schmitt; Carlheinz Röcker; Anya Salih; Klaus-Dieter Spindler; G Ulrich Nienhaus
Journal:  Proc Natl Acad Sci U S A       Date:  2004-10-25       Impact factor: 11.205

6.  Identification of clustering artifacts in photoactivated localization microscopy.

Authors:  Paolo Annibale; Stefano Vanni; Marco Scarselli; Ursula Rothlisberger; Aleksandra Radenovic
Journal:  Nat Methods       Date:  2011-06-12       Impact factor: 28.547

Review 7.  From EosFP to mIrisFP: structure-based development of advanced photoactivatable marker proteins of the GFP-family.

Authors:  Jörg Wiedenmann; Susan Gayda; Virgile Adam; Franz Oswald; Karin Nienhaus; Dominique Bourgeois; G Ulrich Nienhaus
Journal:  J Biophotonics       Date:  2011-02-14       Impact factor: 3.207

8.  Diffraction-unlimited all-optical imaging and writing with a photochromic GFP.

Authors:  Tim Grotjohann; Ilaria Testa; Marcel Leutenegger; Hannes Bock; Nicolai T Urban; Flavie Lavoie-Cardinal; Katrin I Willig; Christian Eggeling; Stefan Jakobs; Stefan W Hell
Journal:  Nature       Date:  2011-09-11       Impact factor: 49.962

9.  Fast, single-molecule localization that achieves theoretically minimum uncertainty.

Authors:  Carlas S Smith; Nikolai Joseph; Bernd Rieger; Keith A Lidke
Journal:  Nat Methods       Date:  2010-04-04       Impact factor: 28.547

10.  Quantitative photo activated localization microscopy: unraveling the effects of photoblinking.

Authors:  Paolo Annibale; Stefano Vanni; Marco Scarselli; Ursula Rothlisberger; Aleksandra Radenovic
Journal:  PLoS One       Date:  2011-07-26       Impact factor: 3.240

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  43 in total

1.  Three-dimensional photoactivated localization microscopy with genetically expressed probes.

Authors:  Kelsey Temprine; Andrew G York; Hari Shroff
Journal:  Methods Mol Biol       Date:  2015

2.  Chromophore reduction plus reversible photobleaching: how the mKate2 "photoconversion" works.

Authors:  Elena A Protasova; Alexander S Mishin; Konstantin A Lukyanov; Eugene G Maksimov; Alexey M Bogdanov
Journal:  Photochem Photobiol Sci       Date:  2021-06-04       Impact factor: 3.982

3.  Ultrafast, accurate, and robust localization of anisotropic dipoles.

Authors:  Yongdeng Zhang; Lusheng Gu; Hao Chang; Wei Ji; Yan Chen; Mingshu Zhang; Lu Yang; Bei Liu; Liangyi Chen; Tao Xu
Journal:  Protein Cell       Date:  2013-06-07       Impact factor: 14.870

Review 4.  Super-resolution localization microscopy with photoactivatable fluorescent marker proteins.

Authors:  Per Niklas Hedde; G Ulrich Nienhaus
Journal:  Protoplasma       Date:  2013-10-27       Impact factor: 3.356

5.  Mechanistic insights into reversible photoactivation in proteins of the GFP family.

Authors:  Susan Gayda; Karin Nienhaus; G Ulrich Nienhaus
Journal:  Biophys J       Date:  2012-12-18       Impact factor: 4.033

6.  F- and G-actin homeostasis regulates mechanosensitive actin nucleation by formins.

Authors:  Chiharu Higashida; Tai Kiuchi; Yushi Akiba; Hiroaki Mizuno; Masahiro Maruoka; Shuh Narumiya; Kensaku Mizuno; Naoki Watanabe
Journal:  Nat Cell Biol       Date:  2013-03-03       Impact factor: 28.824

7.  A sensitive and quantitative autolysosome probe for detecting autophagic activity in live and prestained fixed cells.

Authors:  Juan-Juan Chen; Jing Jing; Hao Chang; Yueguang Rong; Yang Hai; Juan Tang; Jun-Long Zhang; Pingyong Xu
Journal:  Autophagy       Date:  2013-04-10       Impact factor: 16.016

8.  Stable small quantum dots for synaptic receptor tracking on live neurons.

Authors:  En Cai; Pinghua Ge; Sang Hak Lee; Okunola Jeyifous; Yong Wang; Yanxin Liu; Katie M Wilson; Sung Jun Lim; Michelle A Baird; John E Stone; Kwan Young Lee; Michael W Davidson; Hee Jung Chung; Klaus Schulten; Andrew M Smith; William N Green; Paul R Selvin
Journal:  Angew Chem Int Ed Engl       Date:  2014-09-26       Impact factor: 15.336

9.  Reversibly switchable fluorescence microscopy with enhanced resolution and image contrast.

Authors:  Junjie Yao; Daria M Shcherbakova; Chiye Li; Arie Krumholz; Ramon A Lorca; Erin Reinl; Sarah K England; Vladislav V Verkhusha; Lihong V Wang
Journal:  J Biomed Opt       Date:  2014-08       Impact factor: 3.170

Review 10.  Chromophore chemistry of fluorescent proteins controlled by light.

Authors:  Daria M Shcherbakova; Vladislav V Verkhusha
Journal:  Curr Opin Chem Biol       Date:  2014-05-13       Impact factor: 8.822

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