Literature DB >> 23286122

Unbiased groupwise registration of white matter tractography.

Lauren J O'Donnell1, William M Wells, Alexandra J Golby, Carl-Fredrik Westin.   

Abstract

We present what we believe to be the first investigation into unbiased multi-subject registration of whole brain diffusion tractography of the white matter. To our knowledge, this is also the first entropy-based objective function applied to fiber tract registration. To define the probability of fiber trajectories for the computation of entropy, we take advantage of a pairwise fiber distance used as the basis for a Gaussian-like kernel. By employing several values of the kernel's scale parameter, the method is inherently multi-scale. Results of experiments using synthetic and real datasets demonstrate the potential of the method for simultaneous joint registration of tractography.

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Year:  2012        PMID: 23286122      PMCID: PMC3638882          DOI: 10.1007/978-3-642-33454-2_16

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  16 in total

1.  PET-CT image registration in the chest using free-form deformations.

Authors:  David Mattes; David R Haynor; Hubert Vesselle; Thomas K Lewellen; William Eubank
Journal:  IEEE Trans Med Imaging       Date:  2003-01       Impact factor: 10.048

2.  A supervised framework for the registration and segmentation of white matter fiber tracts.

Authors:  Arnaldo Mayer; Gali Zimmerman-Moreno; Ran Shadmi; Amit Batikoff; Hayit Greenspan
Journal:  IEEE Trans Med Imaging       Date:  2010-08-16       Impact factor: 10.048

3.  Registration, atlas estimation and variability analysis of white matter fiber bundles modeled as currents.

Authors:  Stanley Durrleman; Pierre Fillard; Xavier Pennec; Alain Trouvé; Nicholas Ayache
Journal:  Neuroimage       Date:  2010-11-29       Impact factor: 6.556

4.  Nonrigid point set matching of white matter tracts for diffusion tensor image analysis.

Authors:  Matthan W A Caan; Lucas J van Vliet; Charles B L M Majoie; Maaike M van der Graaff; C A Grimbergen; Frans M Vos
Journal:  IEEE Trans Biomed Eng       Date:  2010-11-29       Impact factor: 4.538

5.  Fiber tract-oriented statistics for quantitative diffusion tensor MRI analysis.

Authors:  Isabelle Corouge; P Thomas Fletcher; Sarang Joshi; Sylvain Gouttard; Guido Gerig
Journal:  Med Image Anal       Date:  2006-08-22       Impact factor: 8.545

6.  High-dimensional spatial normalization of diffusion tensor images improves the detection of white matter differences: an example study using amyotrophic lateral sclerosis.

Authors:  Hui Zhang; Brian B Avants; Paul A Yushkevich; John H Woo; Sumei Wang; Leo F McCluskey; Lauren B Elman; Elias R Melhem; James C Gee
Journal:  IEEE Trans Med Imaging       Date:  2007-11       Impact factor: 10.048

7.  A unified framework for clustering and quantitative analysis of white matter fiber tracts.

Authors:  Mahnaz Maddah; W Eric L Grimson; Simon K Warfield; William M Wells
Journal:  Med Image Anal       Date:  2007-10-25       Impact factor: 8.545

8.  Co-registration of white matter tractographies by adaptive-mean-shift and Gaussian mixture modeling.

Authors:  Orly Zvitia; Arnaldo Mayer; Ran Shadmi; Shmuel Miron; Hayit K Greenspan
Journal:  IEEE Trans Med Imaging       Date:  2009-08-25       Impact factor: 10.048

9.  Consistency Clustering: A Robust Algorithm for Group-wise Registration, Segmentation and Automatic Atlas Construction in Diffusion MRI.

Authors:  Ulas Ziyan; Mert R Sabuncu; W Eric L Grimson; Carl-Fredrik Westin
Journal:  Int J Comput Vis       Date:  2009       Impact factor: 7.410

10.  Unbiased diffeomorphic atlas construction for computational anatomy.

Authors:  S Joshi; Brad Davis; Matthieu Jomier; Guido Gerig
Journal:  Neuroimage       Date:  2004       Impact factor: 6.556

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  20 in total

1.  Deep white matter analysis (DeepWMA): Fast and consistent tractography segmentation.

Authors:  Fan Zhang; Suheyla Cetin Karayumak; Nico Hoffmann; Yogesh Rathi; Alexandra J Golby; Lauren J O'Donnell
Journal:  Med Image Anal       Date:  2020-06-24       Impact factor: 8.545

2.  An anatomically curated fiber clustering white matter atlas for consistent white matter tract parcellation across the lifespan.

Authors:  Fan Zhang; Ye Wu; Isaiah Norton; Laura Rigolo; Yogesh Rathi; Nikos Makris; Lauren J O'Donnell
Journal:  Neuroimage       Date:  2018-06-18       Impact factor: 6.556

3.  Identifying Cross-individual Correspondences of 3-hinge Gyri.

Authors:  Tuo Zhang; Ying Huang; Lin Zhao; Zhibin He; Xi Jiang; Lei Guo; Xiaoping Hu; Tianming Liu
Journal:  Med Image Anal       Date:  2020-04-13       Impact factor: 8.545

Review 4.  Advances in computational and statistical diffusion MRI.

Authors:  Lauren J O'Donnell; Alessandro Daducci; Demian Wassermann; Christophe Lenglet
Journal:  NMR Biomed       Date:  2017-11-14       Impact factor: 4.044

5.  A comparison of three fiber tract delineation methods and their impact on white matter analysis.

Authors:  Valerie J Sydnor; Ana María Rivas-Grajales; Amanda E Lyall; Fan Zhang; Sylvain Bouix; Sarina Karmacharya; Martha E Shenton; Carl-Fredrik Westin; Nikos Makris; Demian Wassermann; Lauren J O'Donnell; Marek Kubicki
Journal:  Neuroimage       Date:  2018-05-19       Impact factor: 6.556

6.  A registration method for improving quantitative assessment in probabilistic diffusion tractography.

Authors:  J L Waugh; J K Kuster; M L Makhlouf; J M Levenstein; T J Multhaupt-Buell; S K Warfield; N Sharma; A J Blood
Journal:  Neuroimage       Date:  2019-01-03       Impact factor: 6.556

7.  Sheet Probability Index (SPI): Characterizing the geometrical organization of the white matter with diffusion MRI.

Authors:  Chantal M W Tax; Tom Dela Haije; Andrea Fuster; Carl-Fredrik Westin; Max A Viergever; Luc Florack; Alexander Leemans
Journal:  Neuroimage       Date:  2016-07-25       Impact factor: 6.556

8.  Nonparametric Bayes Models of Fiber Curves Connecting Brain Regions.

Authors:  Zhengwu Zhang; Maxime Descoteaux; David B Dunson
Journal:  J Am Stat Assoc       Date:  2019-04-30       Impact factor: 5.033

9.  Whole brain white matter connectivity analysis using machine learning: An application to autism.

Authors:  Fan Zhang; Peter Savadjiev; Weidong Cai; Yang Song; Yogesh Rathi; Birkan Tunç; Drew Parker; Tina Kapur; Robert T Schultz; Nikos Makris; Ragini Verma; Lauren J O'Donnell
Journal:  Neuroimage       Date:  2017-10-25       Impact factor: 6.556

10.  Suprathreshold fiber cluster statistics: Leveraging white matter geometry to enhance tractography statistical analysis.

Authors:  Fan Zhang; Weining Wu; Lipeng Ning; Gloria McAnulty; Deborah Waber; Borjan Gagoski; Kiera Sarill; Hesham M Hamoda; Yang Song; Weidong Cai; Yogesh Rathi; Lauren J O'Donnell
Journal:  Neuroimage       Date:  2018-01-11       Impact factor: 6.556

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