Literature DB >> 29134716

Advances in computational and statistical diffusion MRI.

Lauren J O'Donnell1, Alessandro Daducci2,3, Demian Wassermann4, Christophe Lenglet5.   

Abstract

Computational methods are crucial for the analysis of diffusion magnetic resonance imaging (MRI) of the brain. Computational diffusion MRI can provide rich information at many size scales, including local microstructure measures such as diffusion anisotropies or apparent axon diameters, whole-brain connectivity information that describes the brain's wiring diagram and population-based studies in health and disease. Many of the diffusion MRI analyses performed today were not possible five, ten or twenty years ago, due to the requirements for large amounts of computer memory or processor time. In addition, mathematical frameworks had to be developed or adapted from other fields to create new ways to analyze diffusion MRI data. The purpose of this review is to highlight recent computational and statistical advances in diffusion MRI and to put these advances into context by comparison with the more traditional computational methods that are in popular clinical and scientific use. We aim to provide a high-level overview of interest to diffusion MRI researchers, with a more in-depth treatment to illustrate selected computational advances.
Copyright © 2017 John Wiley & Sons, Ltd.

Entities:  

Keywords:  diffusion MRI; registration; statistics; tractography

Mesh:

Year:  2017        PMID: 29134716      PMCID: PMC5951736          DOI: 10.1002/nbm.3805

Source DB:  PubMed          Journal:  NMR Biomed        ISSN: 0952-3480            Impact factor:   4.044


  127 in total

Review 1.  Deformable medical image registration: a survey.

Authors:  Aristeidis Sotiras; Christos Davatzikos; Nikos Paragios
Journal:  IEEE Trans Med Imaging       Date:  2013-05-31       Impact factor: 10.048

2.  Tractometer: towards validation of tractography pipelines.

Authors:  Marc-Alexandre Côté; Gabriel Girard; Arnaud Boré; Eleftherios Garyfallidis; Jean-Christophe Houde; Maxime Descoteaux
Journal:  Med Image Anal       Date:  2013-04-25       Impact factor: 8.545

3.  Comment on "The geometric structure of the brain fiber pathways".

Authors:  Marco Catani; Istvan Bodi; Flavio Dell'Acqua
Journal:  Science       Date:  2012-09-28       Impact factor: 47.728

4.  Diffusion spectrum magnetic resonance imaging (DSI) tractography of crossing fibers.

Authors:  V J Wedeen; R P Wang; J D Schmahmann; T Benner; W Y I Tseng; G Dai; D N Pandya; P Hagmann; H D'Arceuil; A J de Crespigny
Journal:  Neuroimage       Date:  2008-04-08       Impact factor: 6.556

5.  Superficial white matter fiber systems impede detection of long-range cortical connections in diffusion MR tractography.

Authors:  Colin Reveley; Anil K Seth; Carlo Pierpaoli; Afonso C Silva; David Yu; Richard C Saunders; David A Leopold; Frank Q Ye
Journal:  Proc Natl Acad Sci U S A       Date:  2015-05-11       Impact factor: 11.205

6.  MITK diffusion imaging.

Authors:  K H Fritzsche; P F Neher; I Reicht; T van Bruggen; C Goch; M Reisert; M Nolden; S Zelzer; H-P Meinzer; B Stieltjes
Journal:  Methods Inf Med       Date:  2012-09-28       Impact factor: 2.176

7.  White matter integrity, fiber count, and other fallacies: the do's and don'ts of diffusion MRI.

Authors:  Derek K Jones; Thomas R Knösche; Robert Turner
Journal:  Neuroimage       Date:  2012-07-23       Impact factor: 6.556

8.  Evaluation and statistical inference for human connectomes.

Authors:  Franco Pestilli; Jason D Yeatman; Ariel Rokem; Kendrick N Kay; Brian A Wandell
Journal:  Nat Methods       Date:  2014-09-07       Impact factor: 28.547

Review 9.  Diffusion Tractography in Deep Brain Stimulation Surgery: A Review.

Authors:  Evan Calabrese
Journal:  Front Neuroanat       Date:  2016-05-02       Impact factor: 3.856

10.  Joint Multi-Fiber NODDI Parameter Estimation and Tractography Using the Unscented Information Filter.

Authors:  Chinthala P Reddy; Yogesh Rathi
Journal:  Front Neurosci       Date:  2016-04-20       Impact factor: 4.677

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  6 in total

Review 1.  The Original Social Network: White Matter and Social Cognition.

Authors:  Yin Wang; Ingrid R Olson
Journal:  Trends Cogn Sci       Date:  2018-04-05       Impact factor: 20.229

Review 2.  Brain networks and their relevance for stroke rehabilitation.

Authors:  Adrian G Guggisberg; Philipp J Koch; Friedhelm C Hummel; Cathrin M Buetefisch
Journal:  Clin Neurophysiol       Date:  2019-04-15       Impact factor: 3.708

3.  Deep Diffusion MRI Registration (DDMReg): A Deep Learning Method for Diffusion MRI Registration.

Authors:  Fan Zhang; William M Wells; Lauren J O'Donnell
Journal:  IEEE Trans Med Imaging       Date:  2022-06-01       Impact factor: 11.037

Review 4.  Diffusion Imaging in the Post HCP Era.

Authors:  Steen Moeller; Pramod Pisharady Kumar; Jesper Andersson; Mehmet Akcakaya; Noam Harel; Ruoyun Emily Ma; Xiaoping Wu; Essa Yacoub; Christophe Lenglet; Kamil Ugurbil
Journal:  J Magn Reson Imaging       Date:  2020-06-20       Impact factor: 5.119

5.  Hierarchical Nonlocal Residual Networks for Image Quality Assessment of Pediatric Diffusion MRI With Limited and Noisy Annotations.

Authors:  Siyuan Liu; Kim-Han Thung; Weili Lin; Dinggang Shen; Pew-Thian Yap
Journal:  IEEE Trans Med Imaging       Date:  2020-10-28       Impact factor: 10.048

6.  Fine-Grained Topography and Modularity of the Macaque Frontal Pole Cortex Revealed by Anatomical Connectivity Profiles.

Authors:  Bin He; Long Cao; Xiaoluan Xia; Baogui Zhang; Dan Zhang; Bo You; Lingzhong Fan; Tianzi Jiang
Journal:  Neurosci Bull       Date:  2020-10-27       Impact factor: 5.203

  6 in total

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