Literature DB >> 20716499

A supervised framework for the registration and segmentation of white matter fiber tracts.

Arnaldo Mayer1, Gali Zimmerman-Moreno, Ran Shadmi, Amit Batikoff, Hayit Greenspan.   

Abstract

A supervised framework is presented for the automatic registration and segmentation of white matter (WM) tractographies extracted from brain DT-MRI. The framework relies on the direct registration between the fibers, without requiring any intensity-based registration as preprocessing. An affine transform is recovered together with a set of segmented fibers. A recently introduced probabilistic boosting tree classifier is used in a segmentation refinement step to improve the precision of the target tract segmentation. The proposed method compares favorably with a state-of-the-art intensity-based algorithm for affine registration of DTI tractographies. Segmentation results for 12 major WM tracts are demonstrated. Quantitative results are also provided for the segmentation of a particularly difficult case, the optic radiation tract. An average precision of 80% and recall of 55% were obtained for the optimal configuration of the presented method.

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Year:  2010        PMID: 20716499     DOI: 10.1109/TMI.2010.2067222

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  8 in total

1.  Whole brain fiber-based comparison (FBC)-A tool for diffusion tensor imaging-based cohort studies.

Authors:  Gali Zimmerman-Moreno; Dafna Ben Bashat; Moran Artzi; Beatrice Nefussy; Vivian Drory; Orna Aizenstein; Hayit Greenspan
Journal:  Hum Brain Mapp       Date:  2015-10-31       Impact factor: 5.038

2.  Comparative performance evaluation of automated segmentation methods of hippocampus from magnetic resonance images of temporal lobe epilepsy patients.

Authors:  Mohammad-Parsa Hosseini; Mohammad-Reza Nazem-Zadeh; Dario Pompili; Kourosh Jafari-Khouzani; Kost Elisevich; Hamid Soltanian-Zadeh
Journal:  Med Phys       Date:  2016-01       Impact factor: 4.071

3.  Direct segmentation of the major white matter tracts in diffusion tensor images.

Authors:  Pierre-Louis Bazin; Chuyang Ye; John A Bogovic; Navid Shiee; Daniel S Reich; Jerry L Prince; Dzung L Pham
Journal:  Neuroimage       Date:  2011-06-21       Impact factor: 6.556

4.  Unbiased groupwise registration of white matter tractography.

Authors:  Lauren J O'Donnell; William M Wells; Alexandra J Golby; Carl-Fredrik Westin
Journal:  Med Image Comput Comput Assist Interv       Date:  2012

5.  A registration method for improving quantitative assessment in probabilistic diffusion tractography.

Authors:  J L Waugh; J K Kuster; M L Makhlouf; J M Levenstein; T J Multhaupt-Buell; S K Warfield; N Sharma; A J Blood
Journal:  Neuroimage       Date:  2019-01-03       Impact factor: 6.556

6.  Automated multi-subject fiber clustering of mouse brain using dominant sets.

Authors:  Luca Dodero; Sebastiano Vascon; Vittorio Murino; Angelo Bifone; Alessandro Gozzi; Diego Sona
Journal:  Front Neuroinform       Date:  2015-01-12       Impact factor: 4.081

7.  White Matter Tract Segmentation as Multiple Linear Assignment Problems.

Authors:  Nusrat Sharmin; Emanuele Olivetti; Paolo Avesani
Journal:  Front Neurosci       Date:  2018-02-06       Impact factor: 4.677

8.  Image registration: Maximum likelihood, minimum entropy and deep learning.

Authors:  Alireza Sedghi; Lauren J O'Donnell; Tina Kapur; Erik Learned-Miller; Parvin Mousavi; William M Wells
Journal:  Med Image Anal       Date:  2020-12-18       Impact factor: 8.545

  8 in total

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