Literature DB >> 23045392

The conserved Bud20 zinc finger protein is a new component of the ribosomal 60S subunit export machinery.

Jochen Bassler1, Isabella Klein, Claudia Schmidt, Martina Kallas, Emma Thomson, Maria Anna Wagner, Bettina Bradatsch, Gerald Rechberger, Heimo Strohmaier, Ed Hurt, Helmut Bergler.   

Abstract

The nuclear export of the preribosomal 60S (pre-60S) subunit is coordinated with late steps in ribosome assembly. Here, we show that Bud20, a conserved C(2)H(2)-type zinc finger protein, is an unrecognized shuttling factor required for the efficient export of pre-60S subunits. Bud20 associates with late pre-60S particles in the nucleoplasm and accompanies them into the cytoplasm, where it is released through the action of the Drg1 AAA-ATPase. Cytoplasmic Bud20 is then reimported via a Kap123-dependent pathway. The deletion of Bud20 induces a strong pre-60S export defect and causes synthetic lethality when combined with mutant alleles of known pre-60S subunit export factors. The function of Bud20 in ribosome export depends on a short conserved N-terminal sequence, as we observed that mutations or the deletion of this motif impaired 60S subunit export and generated the genetic link to other pre-60S export factors. We suggest that the shuttling Bud20 is recruited to the nascent 60S subunit via its central zinc finger rRNA binding domain to facilitate the subsequent nuclear export of the preribosome employing its N-terminal extension.

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Year:  2012        PMID: 23045392      PMCID: PMC3510546          DOI: 10.1128/MCB.00910-12

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  61 in total

1.  Maturation and intranuclear transport of pre-ribosomes requires Noc proteins.

Authors:  P Milkereit; O Gadal; A Podtelejnikov; S Trumtel; N Gas; E Petfalski; D Tollervey; M Mann; E Hurt; H Tschochner
Journal:  Cell       Date:  2001-05-18       Impact factor: 41.582

2.  The permeability barrier of nuclear pore complexes appears to operate via hydrophobic exclusion.

Authors:  Katharina Ribbeck; Dirk Görlich
Journal:  EMBO J       Date:  2002-06-03       Impact factor: 11.598

3.  Ecm1 is a new pre-ribosomal factor involved in pre-60S particle export.

Authors:  Yanhua Yao; Emilie Demoinet; Cosmin Saveanu; Pascal Lenormand; Alain Jacquier; Micheline Fromont-Racine
Journal:  RNA       Date:  2010-03-26       Impact factor: 4.942

4.  Identification of protein binding sites on U3 snoRNA and pre-rRNA by UV cross-linking and high-throughput analysis of cDNAs.

Authors:  Sander Granneman; Grzegorz Kudla; Elisabeth Petfalski; David Tollervey
Journal:  Proc Natl Acad Sci U S A       Date:  2009-05-29       Impact factor: 11.205

5.  Arx1 functions as an unorthodox nuclear export receptor for the 60S preribosomal subunit.

Authors:  Bettina Bradatsch; Jun Katahira; Eva Kowalinski; Gert Bange; Wei Yao; Toshihiro Sekimoto; Viola Baumgärtel; Guido Boese; Jochen Bassler; Klemens Wild; Reiner Peters; Yoshihiro Yoneda; Irmi Sinning; Ed Hurt
Journal:  Mol Cell       Date:  2007-09-07       Impact factor: 17.970

6.  The NUG1 GTPase reveals and N-terminal RNA-binding domain that is essential for association with 60 S pre-ribosomal particles.

Authors:  Jochen Bassler; Martina Kallas; Ed Hurt
Journal:  J Biol Chem       Date:  2006-06-27       Impact factor: 5.157

7.  Nuclear export of 60s ribosomal subunits depends on Xpo1p and requires a nuclear export sequence-containing factor, Nmd3p, that associates with the large subunit protein Rpl10p.

Authors:  O Gadal; D Strauss; J Kessl; B Trumpower; D Tollervey; E Hurt
Journal:  Mol Cell Biol       Date:  2001-05       Impact factor: 4.272

8.  Arx1 is a nuclear export receptor for the 60S ribosomal subunit in yeast.

Authors:  Nai-Jung Hung; Kai-Yin Lo; Samir S Patel; Kara Helmke; Arlen W Johnson
Journal:  Mol Biol Cell       Date:  2007-12-12       Impact factor: 4.138

9.  A Noc complex specifically involved in the formation and nuclear export of ribosomal 40 S subunits.

Authors:  Philipp Milkereit; Daniela Strauss; Jochen Bassler; Olivier Gadal; Holger Kühn; Sylvia Schütz; Nicole Gas; Johannes Lechner; Ed Hurt; Herbert Tschochner
Journal:  J Biol Chem       Date:  2002-11-20       Impact factor: 5.157

10.  The structure of the eukaryotic ribosome at 3.0 Å resolution.

Authors:  Adam Ben-Shem; Nicolas Garreau de Loubresse; Sergey Melnikov; Lasse Jenner; Gulnara Yusupova; Marat Yusupov
Journal:  Science       Date:  2011-11-17       Impact factor: 47.728

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  23 in total

1.  Ribosome-stalk biogenesis is coupled with recruitment of nuclear-export factor to the nascent 60S subunit.

Authors:  Anshuk Sarkar; Markus Pech; Matthias Thoms; Roland Beckmann; Ed Hurt
Journal:  Nat Struct Mol Biol       Date:  2016-10-24       Impact factor: 15.369

Review 2.  Assembly and nuclear export of pre-ribosomal particles in budding yeast.

Authors:  Stefan Gerhardy; Anna Maria Menet; Cohue Peña; Janusz Jurand Petkowski; Vikram Govind Panse
Journal:  Chromosoma       Date:  2014-05-11       Impact factor: 4.316

3.  Structural snapshot of cytoplasmic pre-60S ribosomal particles bound by Nmd3, Lsg1, Tif6 and Reh1.

Authors:  Chengying Ma; Shan Wu; Ningning Li; Yan Chen; Kaige Yan; Zhifei Li; Lvqin Zheng; Jianlin Lei; John L Woolford; Ning Gao
Journal:  Nat Struct Mol Biol       Date:  2017-01-23       Impact factor: 15.369

4.  Eukaryotic Ribosome assembly and Nucleocytoplasmic Transport.

Authors:  Michaela Oborská-Oplová; Ute Fischer; Martin Altvater; Vikram Govind Panse
Journal:  Methods Mol Biol       Date:  2022

5.  Immature large ribosomal subunits containing the 7S pre-rRNA can engage in translation in Saccharomyces cerevisiae.

Authors:  Olga Rodríguez-Galán; Juan J García-Gómez; Dieter Kressler; Jesús de la Cruz
Journal:  RNA Biol       Date:  2015       Impact factor: 4.652

Review 6.  Ribosome biogenesis in the yeast Saccharomyces cerevisiae.

Authors:  John L Woolford; Susan J Baserga
Journal:  Genetics       Date:  2013-11       Impact factor: 4.562

7.  The drug diazaborine blocks ribosome biogenesis by inhibiting the AAA-ATPase Drg1.

Authors:  Mathias Loibl; Isabella Klein; Michael Prattes; Claudia Schmidt; Lisa Kappel; Gertrude Zisser; Anna Gungl; Elmar Krieger; Brigitte Pertschy; Helmut Bergler
Journal:  J Biol Chem       Date:  2013-12-26       Impact factor: 5.157

8.  Structural basis for inhibition of the AAA-ATPase Drg1 by diazaborine.

Authors:  Michael Prattes; Irina Grishkovskaya; Victor-Valentin Hodirnau; Ingrid Rössler; Isabella Klein; Christina Hetzmannseder; Gertrude Zisser; Christian C Gruber; Karl Gruber; David Haselbach; Helmut Bergler
Journal:  Nat Commun       Date:  2021-06-09       Impact factor: 14.919

9.  Non-FG mediated transport of the large pre-ribosomal subunit through the nuclear pore complex by the mRNA export factor Gle2.

Authors:  Laura Occhipinti; Yiming Chang; Martin Altvater; Anna M Menet; Stefan Kemmler; Vikram G Panse
Journal:  Nucleic Acids Res       Date:  2013-07-31       Impact factor: 16.971

10.  A RanGTP-independent mechanism allows ribosomal protein nuclear import for ribosome assembly.

Authors:  Sabina Schütz; Ute Fischer; Martin Altvater; Purnima Nerurkar; Cohue Peña; Michaela Gerber; Yiming Chang; Stefanie Caesar; Olga T Schubert; Gabriel Schlenstedt; Vikram G Panse
Journal:  Elife       Date:  2014-08-21       Impact factor: 8.140

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