Literature DB >> 35796985

Eukaryotic Ribosome assembly and Nucleocytoplasmic Transport.

Michaela Oborská-Oplová1,2, Ute Fischer1, Martin Altvater1, Vikram Govind Panse3,4.   

Abstract

The process of eukaryotic ribosome assembly stretches across the nucleolus, the nucleoplasm and the cytoplasm, and therefore relies on efficient nucleocytoplasmic transport. In yeast, the import machinery delivers ~140,000 ribosomal proteins every minute to the nucleus for ribosome assembly. At the same time, the export machinery facilitates translocation of ~2000 pre-ribosomal particles every minute through ~200 nuclear pore complexes (NPC) into the cytoplasm. Eukaryotic ribosome assembly also requires >200 conserved assembly factors, which transiently associate with pre-ribosomal particles. Their site(s) of action on maturing pre-ribosomes are beginning to be elucidated. In this chapter, we outline protocols that enable rapid biochemical isolation of pre-ribosomal particles for single particle cryo-electron microscopy (cryo-EM) and in vitro reconstitution of nuclear transport processes. We discuss cell-biological and genetic approaches to investigate how the ribosome assembly and the nucleocytoplasmic transport machineries collaborate to produce functional ribosomes.
© 2022. The Author(s).

Entities:  

Keywords:  Budding Yeast; Nuclear Export; Nuclear Import; Ribosome Assembly; preribosome structure

Mesh:

Substances:

Year:  2022        PMID: 35796985     DOI: 10.1007/978-1-0716-2501-9_7

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  86 in total

Review 1.  The economics of ribosome biosynthesis in yeast.

Authors:  J R Warner
Journal:  Trends Biochem Sci       Date:  1999-11       Impact factor: 13.807

2.  Pre-18S ribosomal RNA is structurally compacted into the SSU processome prior to being cleaved from nascent transcripts in Saccharomyces cerevisiae.

Authors:  Yvonne N Osheim; Sarah L French; Kristin M Keck; Erica A Champion; Krasimir Spasov; François Dragon; Susan J Baserga; Ann L Beyer
Journal:  Mol Cell       Date:  2004-12-22       Impact factor: 17.970

3.  Yeast pre-rRNA processing and modification occur cotranscriptionally.

Authors:  Martin Kos; David Tollervey
Journal:  Mol Cell       Date:  2010-03-26       Impact factor: 17.970

Review 4.  A Puzzle of Life: Crafting Ribosomal Subunits.

Authors:  Dieter Kressler; Ed Hurt; Jochen Baßler
Journal:  Trends Biochem Sci       Date:  2017-06-01       Impact factor: 13.807

5.  Architecture of the 90S Pre-ribosome: A Structural View on the Birth of the Eukaryotic Ribosome.

Authors:  Markus Kornprobst; Martin Turk; Nikola Kellner; Jingdong Cheng; Dirk Flemming; Isabelle Koš-Braun; Martin Koš; Matthias Thoms; Otto Berninghausen; Roland Beckmann; Ed Hurt
Journal:  Cell       Date:  2016-07-14       Impact factor: 41.582

6.  Architecture of the yeast small subunit processome.

Authors:  Malik Chaker-Margot; Jonas Barandun; Mirjam Hunziker; Sebastian Klinge
Journal:  Science       Date:  2016-12-15       Impact factor: 47.728

7.  3.2-Å-resolution structure of the 90S preribosome before A1 pre-rRNA cleavage.

Authors:  Jingdong Cheng; Nikola Kellner; Otto Berninghausen; Ed Hurt; Roland Beckmann
Journal:  Nat Struct Mol Biol       Date:  2017-10-02       Impact factor: 15.369

Review 8.  Eukaryotic ribosome assembly, transport and quality control.

Authors:  Cohue Peña; Ed Hurt; Vikram Govind Panse
Journal:  Nat Struct Mol Biol       Date:  2017-09-07       Impact factor: 15.369

9.  Rcl1p, the yeast protein similar to the RNA 3'-phosphate cyclase, associates with U3 snoRNP and is required for 18S rRNA biogenesis.

Authors:  E Billy; T Wegierski; F Nasr; W Filipowicz
Journal:  EMBO J       Date:  2000-05-02       Impact factor: 11.598

10.  Molecular architecture of the 90S small subunit pre-ribosome.

Authors:  Qi Sun; Xing Zhu; Jia Qi; Weidong An; Pengfei Lan; Dan Tan; Rongchang Chen; Bing Wang; Sanduo Zheng; Cheng Zhang; Xining Chen; Wei Zhang; Jing Chen; Meng-Qiu Dong; Keqiong Ye
Journal:  Elife       Date:  2017-02-28       Impact factor: 8.140

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