Literature DB >> 20348449

Ecm1 is a new pre-ribosomal factor involved in pre-60S particle export.

Yanhua Yao1, Emilie Demoinet, Cosmin Saveanu, Pascal Lenormand, Alain Jacquier, Micheline Fromont-Racine.   

Abstract

In eukaryotes, ribosome biogenesis is a highly conserved process that starts in the nucleus and ends in the cytoplasm. In actively growing yeast cells, it is estimated that each nuclear pore complex (NPC) contributes to the export of about 25 pre-ribosomal particles per minute. Such an extremely active process requires several redundant export receptors for the pre-60S particles. Here, we report the identification of a novel pre-60S factor, Ecm1, which partially acts like Arx1 and becomes essential when the NPC function is affected. Ecm1 depletion, combined with the deletion of NPC components led to pre-60S retention in the nucleus. Functional links that we identified between Ecm1, 60S biogenesis, pre-60S export, and the NPC were correlated with physical interactions of Ecm1 with pre-60S particles and nucleoporins. These results support that Ecm1 is an additional factor involved in pre-60S export. While Ecm1 and Arx1 have redundant functions, overproduction of either one could not complement the absence of the other, whereas overproduction of Mex67 was able to partially restore the growth defect resulting from the absence of Ecm1 or Arx1. These data highlight the involvement of many factors acting together to export pre-60S particles.

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Year:  2010        PMID: 20348449      PMCID: PMC2856873          DOI: 10.1261/rna.2012310

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  41 in total

Review 1.  The economics of ribosome biosynthesis in yeast.

Authors:  J R Warner
Journal:  Trends Biochem Sci       Date:  1999-11       Impact factor: 13.807

2.  Identification of a 60S preribosomal particle that is closely linked to nuclear export.

Authors:  J Bassler; P Grandi; O Gadal; T Lessmann; E Petfalski; D Tollervey; J Lechner; E Hurt
Journal:  Mol Cell       Date:  2001-09       Impact factor: 17.970

3.  A large nucleolar U3 ribonucleoprotein required for 18S ribosomal RNA biogenesis.

Authors:  François Dragon; Jennifer E G Gallagher; Patricia A Compagnone-Post; Brianna M Mitchell; Kara A Porwancher; Karen A Wehner; Steven Wormsley; Robert E Settlage; Jeffrey Shabanowitz; Yvonne Osheim; Ann L Beyer; Donald F Hunt; Susan J Baserga
Journal:  Nature       Date:  2002-06-09       Impact factor: 49.962

4.  90S pre-ribosomes include the 35S pre-rRNA, the U3 snoRNP, and 40S subunit processing factors but predominantly lack 60S synthesis factors.

Authors:  Paola Grandi; Vladimir Rybin; Jochen Bassler; Elisabeth Petfalski; Daniela Strauss; Martina Marzioch; Thorsten Schäfer; Bernhard Kuster; Herbert Tschochner; David Tollervey; Anne Claude Gavin; Ed Hurt
Journal:  Mol Cell       Date:  2002-07       Impact factor: 17.970

5.  Nuclear mRNA export requires complex formation between Mex67p and Mtr2p at the nuclear pores.

Authors:  H Santos-Rosa; H Moreno; G Simos; A Segref; B Fahrenkrog; N Panté; E Hurt
Journal:  Mol Cell Biol       Date:  1998-11       Impact factor: 4.272

6.  Genomic expression programs in the response of yeast cells to environmental changes.

Authors:  A P Gasch; P T Spellman; C M Kao; O Carmel-Harel; M B Eisen; G Storz; D Botstein; P O Brown
Journal:  Mol Biol Cell       Date:  2000-12       Impact factor: 4.138

7.  Nuclear export of 60s ribosomal subunits depends on Xpo1p and requires a nuclear export sequence-containing factor, Nmd3p, that associates with the large subunit protein Rpl10p.

Authors:  O Gadal; D Strauss; J Kessl; B Trumpower; D Tollervey; E Hurt
Journal:  Mol Cell Biol       Date:  2001-05       Impact factor: 4.272

Review 8.  Ribosome synthesis in Saccharomyces cerevisiae.

Authors:  J Venema; D Tollervey
Journal:  Annu Rev Genet       Date:  1999       Impact factor: 16.830

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Authors:  J H Ho; G Kallstrom; A W Johnson
Journal:  J Cell Biol       Date:  2000-11-27       Impact factor: 10.539

10.  Requirements for the nuclear export of the small ribosomal subunit.

Authors:  Terence I Moy; Pamela A Silver
Journal:  J Cell Sci       Date:  2002-07-15       Impact factor: 5.285

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  24 in total

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Review 3.  Eukaryotic ribosome assembly, transport and quality control.

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Journal:  Nat Struct Mol Biol       Date:  2017-09-07       Impact factor: 15.369

4.  Yeast ribosomal protein L40 assembles late into precursor 60 S ribosomes and is required for their cytoplasmic maturation.

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5.  The mRNA export factor Npl3 mediates the nuclear export of large ribosomal subunits.

Authors:  Alexandra Hackmann; Thomas Gross; Claudia Baierlein; Heike Krebber
Journal:  EMBO Rep       Date:  2011-09-30       Impact factor: 8.807

6.  Structural snapshot of cytoplasmic pre-60S ribosomal particles bound by Nmd3, Lsg1, Tif6 and Reh1.

Authors:  Chengying Ma; Shan Wu; Ningning Li; Yan Chen; Kaige Yan; Zhifei Li; Lvqin Zheng; Jianlin Lei; John L Woolford; Ning Gao
Journal:  Nat Struct Mol Biol       Date:  2017-01-23       Impact factor: 15.369

7.  Bcp1 Is the Nuclear Chaperone of Rpl23 in Saccharomyces cerevisiae.

Authors:  Ya-Han Ting; Ting-Jun Lu; Arlen W Johnson; Jing-Ting Shie; Bo-Ru Chen; Suresh Kumar S; Kai-Yin Lo
Journal:  J Biol Chem       Date:  2016-12-02       Impact factor: 5.157

Review 8.  Ribosome biogenesis in the yeast Saccharomyces cerevisiae.

Authors:  John L Woolford; Susan J Baserga
Journal:  Genetics       Date:  2013-11       Impact factor: 4.562

9.  Suppressors of mRNA Decapping Defects Restore Growth Without Major Effects on mRNA Decay Rates or Abundance.

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Journal:  Genetics       Date:  2020-09-30       Impact factor: 4.562

10.  The conserved Bud20 zinc finger protein is a new component of the ribosomal 60S subunit export machinery.

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Journal:  Mol Cell Biol       Date:  2012-10-08       Impact factor: 4.272

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