Literature DB >> 27775710

Ribosome-stalk biogenesis is coupled with recruitment of nuclear-export factor to the nascent 60S subunit.

Anshuk Sarkar1, Markus Pech2, Matthias Thoms1, Roland Beckmann2, Ed Hurt1.   

Abstract

Nuclear export of preribosomal subunits is a key step during eukaryotic ribosome formation. To efficiently pass through the FG-repeat meshwork of the nuclear pore complex, the large pre-60S subunit requires several export factors. Here we describe the mechanism of recruitment of the Saccharomyces cerevisiae RNA-export receptor Mex67-Mtr2 to the pre-60S subunit at the proper time. Mex67-Mtr2 binds at the premature ribosomal-stalk region, which later during translation serves as a binding platform for translational GTPases on the mature ribosome. The assembly factor Mrt4, a structural homolog of cytoplasmic-stalk protein P0, masks this site, thus preventing untimely recruitment of Mex67-Mtr2 to nuclear pre-60S particles. Subsequently, Yvh1 triggers Mrt4 release in the nucleus, thereby creating a narrow time window for Mex67-Mtr2 association at this site and facilitating nuclear export of the large subunit. Thus, a spatiotemporal mark on the ribosomal stalk controls the recruitment of an RNA-export receptor to the nascent 60S subunit.

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Year:  2016        PMID: 27775710     DOI: 10.1038/nsmb.3312

Source DB:  PubMed          Journal:  Nat Struct Mol Biol        ISSN: 1545-9985            Impact factor:   15.369


  71 in total

1.  Structural basis for the recognition of a nucleoporin FG repeat by the NTF2-like domain of the TAP/p15 mRNA nuclear export factor.

Authors:  S Fribourg; I C Braun; E Izaurralde; E Conti
Journal:  Mol Cell       Date:  2001-09       Impact factor: 17.970

2.  Nuclear export of ribosomal 60S subunits by the general mRNA export receptor Mex67-Mtr2.

Authors:  Wei Yao; Daniela Roser; Alwin Köhler; Bettina Bradatsch; Jochen Bassler; Ed Hurt
Journal:  Mol Cell       Date:  2007-04-13       Impact factor: 17.970

Review 3.  Towards understanding nuclear pore complex architecture and dynamics in the age of integrative structural analysis.

Authors:  Ed Hurt; Martin Beck
Journal:  Curr Opin Cell Biol       Date:  2015-05-15       Impact factor: 8.382

4.  The mRNA export factor Npl3 mediates the nuclear export of large ribosomal subunits.

Authors:  Alexandra Hackmann; Thomas Gross; Claudia Baierlein; Heike Krebber
Journal:  EMBO Rep       Date:  2011-09-30       Impact factor: 8.807

5.  Temperature-sensitive mutations in the Saccharomyces cerevisiae MRT4, GRC5, SLA2 and THS1 genes result in defects in mRNA turnover.

Authors:  D Zuk; J P Belk; A Jacobson
Journal:  Genetics       Date:  1999-09       Impact factor: 4.562

6.  A versatile toolbox for PCR-based tagging of yeast genes: new fluorescent proteins, more markers and promoter substitution cassettes.

Authors:  Carsten Janke; Maria M Magiera; Nicole Rathfelder; Christof Taxis; Simone Reber; Hiromi Maekawa; Alexandra Moreno-Borchart; Georg Doenges; Etienne Schwob; Elmar Schiebel; Michael Knop
Journal:  Yeast       Date:  2004-08       Impact factor: 3.239

7.  Biogenesis and nuclear export of ribosomal subunits in higher eukaryotes depend on the CRM1 export pathway.

Authors:  Franziska Thomas; Ulrike Kutay
Journal:  J Cell Sci       Date:  2003-04-30       Impact factor: 5.285

8.  A cluster of ribosome synthesis factors regulate pre-rRNA folding and 5.8S rRNA maturation by the Rat1 exonuclease.

Authors:  Sander Granneman; Elisabeth Petfalski; David Tollervey
Journal:  EMBO J       Date:  2011-08-02       Impact factor: 11.598

9.  A transcriptome-wide atlas of RNP composition reveals diverse classes of mRNAs and lncRNAs.

Authors:  Alex Charles Tuck; David Tollervey
Journal:  Cell       Date:  2013-08-29       Impact factor: 41.582

10.  The amino terminal domain from Mrt4 protein can functionally replace the RNA binding domain of the ribosomal P0 protein.

Authors:  María Rodríguez-Mateos; David Abia; Juan J García-Gómez; Antonio Morreale; Jesús de la Cruz; Cruz Santos; Miguel Remacha; Juan P G Ballesta
Journal:  Nucleic Acids Res       Date:  2009-04-03       Impact factor: 16.971

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  17 in total

1.  Nmd3 is a structural mimic of eIF5A, and activates the cpGTPase Lsg1 during 60S ribosome biogenesis.

Authors:  Andrey G Malyutin; Sharmishtha Musalgaonkar; Stephanie Patchett; Joachim Frank; Arlen W Johnson
Journal:  EMBO J       Date:  2017-02-08       Impact factor: 11.598

Review 2.  Eukaryotic ribosome assembly, transport and quality control.

Authors:  Cohue Peña; Ed Hurt; Vikram Govind Panse
Journal:  Nat Struct Mol Biol       Date:  2017-09-07       Impact factor: 15.369

3.  Structural snapshot of cytoplasmic pre-60S ribosomal particles bound by Nmd3, Lsg1, Tif6 and Reh1.

Authors:  Chengying Ma; Shan Wu; Ningning Li; Yan Chen; Kaige Yan; Zhifei Li; Lvqin Zheng; Jianlin Lei; John L Woolford; Ning Gao
Journal:  Nat Struct Mol Biol       Date:  2017-01-23       Impact factor: 15.369

Review 4.  Ribosome assembly coming into focus.

Authors:  Sebastian Klinge; John L Woolford
Journal:  Nat Rev Mol Cell Biol       Date:  2019-02       Impact factor: 94.444

5.  Structural transitions during large ribosomal subunit maturation analyzed by tethered nuclease structure probing in S. cerevisiae.

Authors:  Gisela Pöll; Christian Müller; Malena Bodden; Fabian Teubl; Norbert Eichner; Gerhard Lehmann; Joachim Griesenbeck; Herbert Tschochner; Philipp Milkereit
Journal:  PLoS One       Date:  2017-07-07       Impact factor: 3.240

6.  Reconstitution of the complete pathway of ITS2 processing at the pre-ribosome.

Authors:  Lisa Fromm; Sebastian Falk; Dirk Flemming; Jan Michael Schuller; Matthias Thoms; Elena Conti; Ed Hurt
Journal:  Nat Commun       Date:  2017-11-27       Impact factor: 14.919

Review 7.  Placeholder factors in ribosome biogenesis: please, pave my way.

Authors:  Francisco J Espinar-Marchena; Reyes Babiano; Jesús Cruz
Journal:  Microb Cell       Date:  2017-04-27

8.  MoYvh1 subverts rice defense through functions of ribosomal protein MoMrt4 in Magnaporthe oryzae.

Authors:  Xinyu Liu; Jie Yang; Bin Qian; Yongchao Cai; Xi Zou; Haifeng Zhang; Xiaobo Zheng; Ping Wang; Zhengguang Zhang
Journal:  PLoS Pathog       Date:  2018-04-23       Impact factor: 6.823

9.  Structural snapshots of human pre-60S ribosomal particles before and after nuclear export.

Authors:  Xiaomeng Liang; Mei-Qing Zuo; Yunyang Zhang; Ningning Li; Chengying Ma; Meng-Qiu Dong; Ning Gao
Journal:  Nat Commun       Date:  2020-07-15       Impact factor: 14.919

10.  Visualizing the Assembly Pathway of Nucleolar Pre-60S Ribosomes.

Authors:  Lukas Kater; Matthias Thoms; Clara Barrio-Garcia; Jingdong Cheng; Sherif Ismail; Yasar Luqman Ahmed; Gert Bange; Dieter Kressler; Otto Berninghausen; Irmgard Sinning; Ed Hurt; Roland Beckmann
Journal:  Cell       Date:  2017-12-14       Impact factor: 41.582

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